Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0500
(613 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical ... 31 0.86
U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily ass... 29 2.0
U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily ass... 29 2.0
U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily ass... 29 2.0
Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical p... 29 2.6
Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical p... 29 2.6
Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81017-8|CAC70094.2| 988|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z72511-2|CAA96656.1| 413|Caenorhabditis elegans Hypothetical pr... 29 2.6
U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein. 29 2.6
AY288941-1|AAP44084.1| 987|Caenorhabditis elegans EGL-15 protein. 29 2.6
AC006607-1|AAY44022.1| 208|Caenorhabditis elegans Hypothetical ... 29 2.6
Z78012-6|CAB01416.1| 480|Caenorhabditis elegans Hypothetical pr... 28 4.6
AY557405-1|AAS64750.1| 480|Caenorhabditis elegans cyclin L prot... 28 4.6
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 28 4.6
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 28 4.6
Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical pr... 28 6.0
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 27 8.0
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 27 8.0
>AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical
protein F52G3.1 protein.
Length = 1172
Score = 30.7 bits (66), Expect = 0.86
Identities = 25/104 (24%), Positives = 52/104 (50%)
Frame = +1
Query: 175 LQHSRSWRPNHRKTKP*STS*PSQRRDPSQRPEHRDPQDYTALNERKSQDKHTENLIPNL 354
+Q S+S NH + + + SQ + + + + +DP+ T L K+ K ++L N
Sbjct: 644 VQQSKSQLQNHTQNQ---SQNQSQDHEKNSKTKPKDPKQGTRLFVPKALRKEADDLPAN- 699
Query: 355 TNSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQSKESRSENF 486
G+ +S+ +++K+A NG++++S E +S+ F
Sbjct: 700 ----------GLLSPQSVETKEKIAAAKSNGDVFKSDE-QSKGF 732
>U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform b protein.
Length = 868
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/57 (22%), Positives = 27/57 (47%)
Frame = +1
Query: 256 PSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV 426
P Q ++ + Y+A + K T N+I HK G++ + +DE ++ + +
Sbjct: 344 PKQNNGYQRQRRYSASSASKQDGMFTLNVIMGSQPVHKGMGFSTVKRDERVIVESVI 400
>U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform a protein.
Length = 1004
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/57 (22%), Positives = 27/57 (47%)
Frame = +1
Query: 256 PSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV 426
P Q ++ + Y+A + K T N+I HK G++ + +DE ++ + +
Sbjct: 299 PKQNNGYQRQRRYSASSASKQDGMFTLNVIMGSQPVHKGMGFSTVKRDERVIVESVI 355
>U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform c protein.
Length = 1099
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/57 (22%), Positives = 27/57 (47%)
Frame = +1
Query: 256 PSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV 426
P Q ++ + Y+A + K T N+I HK G++ + +DE ++ + +
Sbjct: 394 PKQNNGYQRQRRYSASSASKQDGMFTLNVIMGSQPVHKGMGFSTVKRDERVIVESVI 450
>Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical
protein F58A3.2c protein.
Length = 1158
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 256 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 366
P + + Q+ T L RK+ DK LIPNLT H
Sbjct: 736 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773
>Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical
protein F58A3.2e protein.
Length = 1051
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 256 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 366
P + + Q+ T L RK+ DK LIPNLT H
Sbjct: 736 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773
>Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical
protein F58A3.2d protein.
Length = 1096
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 256 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 366
P + + Q+ T L RK+ DK LIPNLT H
Sbjct: 736 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773
>Z81017-8|CAC70094.2| 988|Caenorhabditis elegans Hypothetical
protein F58A3.2b protein.
Length = 988
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 256 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 366
P + + Q+ T L RK+ DK LIPNLT H
Sbjct: 684 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 721
>Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical
protein F58A3.2a protein.
Length = 1040
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 256 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 366
P + + Q+ T L RK+ DK LIPNLT H
Sbjct: 736 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773
>Z72511-2|CAA96656.1| 413|Caenorhabditis elegans Hypothetical
protein F55A11.2 protein.
Length = 413
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 388 IDKDESIVSQDKVAFTNDNGNLYQSKESRSENFRNLNTGYLPKII 522
ID SIV D G L + + R+ N +N N+G++ ++
Sbjct: 184 IDHLSSIVKSDITGLNKQIGQLQEFSKRRAGNMKNQNSGHIQLVV 228
>U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein.
Length = 1040
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 256 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 366
P + + Q+ T L RK+ DK LIPNLT H
Sbjct: 736 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773
>AY288941-1|AAP44084.1| 987|Caenorhabditis elegans EGL-15 protein.
Length = 987
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 256 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 366
P + + Q+ T L RK+ DK LIPNLT H
Sbjct: 683 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 720
>AC006607-1|AAY44022.1| 208|Caenorhabditis elegans Hypothetical
protein C09E7.10 protein.
Length = 208
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = +1
Query: 262 QRPEHR--DPQDYTALNERKSQDKHTENLI--PNLTNSHKSYGYTGIDKDESIVSQDK 423
++P+ + DP + L E +D H +I + + H YG T DKD Q K
Sbjct: 73 EKPKQKLIDPSTFITLKENDWRDAHEGRMIIWSHESQHHPDYGKTFTDKDRYTYRQSK 130
>Z78012-6|CAB01416.1| 480|Caenorhabditis elegans Hypothetical
protein C52E4.6a protein.
Length = 480
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +1
Query: 334 ENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQSKESRSENFRNLN 498
ENL + KS I KD VS D+ T D G + K+ + + R N
Sbjct: 364 ENLAKMAPDGEKSTSTVTIGKDSRKVSPDRKNGTKDRGEADRGKKEKDRHRRRSN 418
>AY557405-1|AAS64750.1| 480|Caenorhabditis elegans cyclin L
protein.
Length = 480
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +1
Query: 334 ENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQSKESRSENFRNLN 498
ENL + KS I KD VS D+ T D G + K+ + + R N
Sbjct: 364 ENLAKMAPDGEKSTSTVTIGKDSRKVSPDRKNGTKDRGEADRGKKEKDRHRRRSN 418
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/78 (23%), Positives = 38/78 (48%)
Frame = +1
Query: 244 QRRDPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDK 423
+RR Q+ HR T+ + D +T ++P T+S TG+ ++ ++ +
Sbjct: 12 ERRGQQQQQRHRRQSSGTSGGGASNLDANTLKVLPTTTSSQSICCDTGVAEN---LNLNL 68
Query: 424 VAFTNDNGNLYQSKESRS 477
+ +N N ++ +SK + S
Sbjct: 69 NSISNHNSSIPKSKSNNS 86
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/78 (23%), Positives = 38/78 (48%)
Frame = +1
Query: 244 QRRDPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDK 423
+RR Q+ HR T+ + D +T ++P T+S TG+ ++ ++ +
Sbjct: 12 ERRGQQQQQRHRRQSSGTSGGGASNLDANTLKVLPTTTSSQSICCDTGVAEN---LNLNL 68
Query: 424 VAFTNDNGNLYQSKESRS 477
+ +N N ++ +SK + S
Sbjct: 69 NSISNHNSSIPKSKSNNS 86
>Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical
protein F40F12.5 protein.
Length = 1144
Score = 27.9 bits (59), Expect = 6.0
Identities = 24/91 (26%), Positives = 38/91 (41%)
Frame = +1
Query: 283 PQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQS 462
P ++ E+ + N + LT S+ T D D S+ N NLY S
Sbjct: 2 PGEFAKFPEQSAGSHQFRNPLDELTGSNTITNLTAHDFDYFTQSEK-------NSNLYTS 54
Query: 463 KESRSENFRNLNTGYLPKIIYVQTDGLQIIN 555
+ + + N NLN +P + DG ++IN
Sbjct: 55 ENTSNSNRLNLNQN-IP--VGTLIDGFELIN 82
>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
protein protein.
Length = 1439
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/67 (22%), Positives = 33/67 (49%)
Frame = +1
Query: 241 SQRRDPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQD 420
+ + DPS+ H DP++ ++E + + + N +L N S G+D ++ +
Sbjct: 156 TSKEDPSEDTGHDDPEETQEISE--TPIRRSRNRNASLRNRQSSRSLGGLDFEKLRMGTA 213
Query: 421 KVAFTND 441
+V +N+
Sbjct: 214 RVGDSNE 220
>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical
protein C04D8.1 protein.
Length = 1317
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/67 (22%), Positives = 33/67 (49%)
Frame = +1
Query: 241 SQRRDPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQD 420
+ + DPS+ H DP++ ++E + + + N +L N S G+D ++ +
Sbjct: 34 TSKEDPSEDTGHDDPEETQEISE--TPIRRSRNRNASLRNRQSSRSLGGLDFEKLRMGTA 91
Query: 421 KVAFTND 441
+V +N+
Sbjct: 92 RVGDSNE 98
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,086,912
Number of Sequences: 27780
Number of extensions: 259248
Number of successful extensions: 747
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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