Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0500
         (613 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              21   7.2  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    21   7.2  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   9.5  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   9.5  

>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = +2

Query: 470 LVPKTSGTSTQDTCPKLFMYRQTAY 544
           ++   S   + D C K FM+ +  Y
Sbjct: 109 MIDSCSNVDSSDKCEKSFMFMKCMY 133


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = -2

Query: 348 RY*IFSMLILRLSFIKSRVILRV 280
           +Y +F+M+++ LS + + VIL V
Sbjct: 300 KYLLFTMILVGLSVVITIVILNV 322


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 522 LCTDRRLTDNQLYQVAGSSG 581
           LC D RL    ++ VAG+ G
Sbjct: 68  LCADTRLNKLAVFIVAGAVG 87


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 14/66 (21%), Positives = 26/66 (39%)
 Frame = +1

Query: 364 HKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQSKESRSENFRNLNTGYLPKIIYVQTDGL 543
           H++     ID    I+    +    D  N+++       N RN+    L  + Y ++  L
Sbjct: 632 HRAIRPEPIDAQFDIIQNIYIPEPQDIENIFKYGYVSHANQRNMYKLDLKNMKYTRSADL 691

Query: 544 QIINCI 561
              NC+
Sbjct: 692 SSYNCV 697


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,312
Number of Sequences: 438
Number of extensions: 3332
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)