Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0500
(613 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g33850.1 68415.m04155 expressed protein contains 1 transmembr... 30 1.4
At1g24560.1 68414.m03090 expressed protein 29 2.4
At1g13090.1 68414.m01518 cytochrome P450 71B28, putative (CYP71B... 29 2.4
At3g49900.1 68416.m05455 BTB/POZ domain-containing protein conta... 28 4.2
At5g61680.1 68418.m07739 pectinesterase family protein contains ... 27 7.4
At1g58848.1 68414.m06661 disease resistance protein (CC-NBS-LRR ... 27 7.4
At1g54740.1 68414.m06242 expressed protein 27 7.4
At1g02040.1 68414.m00124 zinc finger (C2H2 type) family protein ... 27 7.4
At4g26770.1 68417.m03856 phosphatidate cytidylyltransferase, put... 27 9.8
>At2g33850.1 68415.m04155 expressed protein contains 1 transmembrane
domain; similar to Protein E6 (Swiss-Prot:Q01197)
[Gossypium hirsutum]
Length = 267
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +1
Query: 244 QRRDPS-QRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQD 420
QR DP Q P + P + NE+K D IP N + YG+ D + ++ +
Sbjct: 35 QREDPKEQNPNNLVPIE---TNEKKEPDDQNPAFIPQSENGYGLYGHETTDNNNEELNNN 91
Query: 421 K 423
K
Sbjct: 92 K 92
>At1g24560.1 68414.m03090 expressed protein
Length = 678
Score = 29.1 bits (62), Expect = 2.4
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Frame = +1
Query: 307 ERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQD--KVAFTNDNGNLYQSKESRS- 477
ER K ENL L N +K DE++ S+D K N + L E S
Sbjct: 85 ERDEALKEKENLTNELENVNKGKDEMSKKLDEALRSRDGLKAEIENSSHMLVSGIEKISG 144
Query: 478 --ENFRNLNTGYLPK 516
+F+N + G LPK
Sbjct: 145 KVSSFKNFSNGGLPK 159
>At1g13090.1 68414.m01518 cytochrome P450 71B28, putative (CYP71B28)
Identical to Cytochrome P450 (SP:Q9SAE3) [Arabidopsis
thaliana]; strong similarity to gb|X97864 cytochrome
P450 from Arabidopsis thaliana and is a member of the
PF|00067 Cytochrome P450 family. ESTs gb|N65665,
gb|T14112, gb|T76255, gb|T20906 and gb|AI100027 come
from this gene
Length = 490
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +1
Query: 445 GNLYQSKESRSENFRNLNTGYLPKIIYVQTDGLQIINCIKWQEAAE 582
GNL+Q +E N RNL+ Y P I++++ + ++ I +EAAE
Sbjct: 39 GNLHQRRELHPRNSRNLSEKYGP-IVFLRYGFVPVV-VISSKEAAE 82
>At3g49900.1 68416.m05455 BTB/POZ domain-containing protein contains
BTB/POZ domain, INTERPRO:IPR000210
Length = 517
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 478 ENFRNLNTGYLPKIIYVQTDGLQII--NCIKWQEAAET 585
++ RNL YL ++++V D +QI+ +C+ +ET
Sbjct: 156 DSLRNLTESYLRRVVFVNVDYIQIVLRSCLLLLPESET 193
>At5g61680.1 68418.m07739 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 338
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 511 PKIIYVQTDGLQIINCIKWQEAAE 582
PK++Y TD ++N WQE E
Sbjct: 258 PKVVYAYTDMSSVVNPSGWQENRE 281
>At1g58848.1 68414.m06661 disease resistance protein (CC-NBS-LRR
class), putative / PRM1 homolog, putative similar to
disease resistance protein rpp8 [Arabidopsis thaliana]
gi|3901294|gb|AAC78631;
Length = 941
Score = 27.5 bits (58), Expect = 7.4
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Frame = +1
Query: 250 RDPSQRPEHRDPQDYTALNE------RKSQD--KHTENLIPNLTNSHKSYGYTGIDKDES 405
R+PS+ +P+ + L++ +KS D KHT ++ N K Y G D E+
Sbjct: 11 RNPSRGVGKSEPETFVCLSKDDERSPKKSSDAKKHTSAVVKNCVEEIKEIIYDGEDTIET 70
Query: 406 IVSQDKVAFTN 438
V + + T+
Sbjct: 71 FVLEQNLGKTS 81
>At1g54740.1 68414.m06242 expressed protein
Length = 280
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 170 HQENLHHNNHSRFRSHI 120
H EN HH+ H R R HI
Sbjct: 241 HDENNHHHYHHRHRHHI 257
>At1g02040.1 68414.m00124 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 324
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = +1
Query: 196 RPNHRKTKP*STS*PSQRRDPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHK 369
R +H+K K S + + + E D D E +DK T ++ +N+H+
Sbjct: 169 RASHKKVKGCFASQDKEEEEEEEYKEDDDDNDEDEDEEEDEEDKSTAHIARKRSNAHE 226
>At4g26770.1 68417.m03856 phosphatidate cytidylyltransferase,
putative / CDP-diglyceride synthetase, putative similar
to CDP-diacylglycerol synthetase GI:2182104 from
[Solanum tuberosum]
Length = 471
Score = 27.1 bits (57), Expect = 9.8
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 277 RDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYT 384
RD T R + + +N PN+ NS + Y YT
Sbjct: 18 RDTSYPTTPTSRMNTNNQRDNHYPNIPNSPRDYNYT 53
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,248,879
Number of Sequences: 28952
Number of extensions: 239754
Number of successful extensions: 641
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1226538000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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