BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0498 (590 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_01_0703 + 6212409-6212456,6212661-6212742,6214031-6214106,621... 28 4.8 06_01_0287 - 2099008-2099023,2099441-2099472,2099776-2099814,209... 28 6.4 03_03_0094 + 14378953-14380728 28 6.4 03_02_0400 - 8135283-8135490,8136047-8136213,8136289-8136477,813... 28 6.4 12_01_0407 - 3219980-3221278 27 8.5 10_08_0899 - 21430516-21430652,21431399-21431462,21432136-214321... 27 8.5 03_01_0206 - 1625020-1625619,1625722-1625931,1626054-1626094,162... 27 8.5 >08_01_0703 + 6212409-6212456,6212661-6212742,6214031-6214106, 6214498-6214594,6214760-6214862,6214973-6215103, 6215285-6215462,6215528-6215715,6215945-6216154, 6216231-6216578,6216660-6216786,6217304-6217455 Length = 579 Score = 28.3 bits (60), Expect = 4.8 Identities = 14/48 (29%), Positives = 21/48 (43%) Frame = -3 Query: 393 LPVYGRPMLACNALVLFQCATEPTPGSRVREHRAPSHGHTHQLVLITL 250 L V G P+ A +V F + +RE R+P+ G T I + Sbjct: 349 LAVKGDPVSAFGGIVAFNTTIDEDLAKEIREFRSPTDGQTRMFYEIVV 396 >06_01_0287 - 2099008-2099023,2099441-2099472,2099776-2099814, 2099916-2099967,2100100-2100164,2100238-2100321, 2101144-2101191,2101272-2101392,2101809-2101911, 2102456-2102537,2102670-2102717,2102993-2103129, 2103225-2103313,2104206-2104327 Length = 345 Score = 27.9 bits (59), Expect = 6.4 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +3 Query: 408 DAVARDHGFVNLGKIFDDHYHFHHRSLTKRS 500 DA A VN G + DD+ HF R TKR+ Sbjct: 35 DAAASKLSCVNKGYMKDDYVHFFVRRTTKRA 65 >03_03_0094 + 14378953-14380728 Length = 591 Score = 27.9 bits (59), Expect = 6.4 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +3 Query: 354 GHYTPTWAVHIPEGREVADAVARDHGFVNLGK 449 GHYTP A H P R +A+ + +G +NL K Sbjct: 85 GHYTPLPAGHSPLKRPIAEYLR--YGVINLDK 114 >03_02_0400 - 8135283-8135490,8136047-8136213,8136289-8136477, 8136560-8136655,8136746-8136874,8136947-8137123, 8137256-8137366,8138592-8138792,8139022-8139186, 8139293-8139527,8139618-8139745,8139833-8139928, 8140017-8140112,8140252-8140325,8140393-8140462, 8140556-8140665,8140753-8140906,8141040-8141155, 8141259-8141379,8141464-8141641,8142331-8142489, 8142619-8142732,8142821-8143000,8143098-8143177 Length = 1117 Score = 27.9 bits (59), Expect = 6.4 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = +2 Query: 17 RDRVIHAPFDSRTVFLAVSVYCKTSQCRVVVLSDNAYISKI 139 + R+ P D V+ + + ++SQCR + L+DN SKI Sbjct: 721 KPRIADEPLDKSKVWKLMEI-TESSQCRSLKLTDNMRTSKI 760 >12_01_0407 - 3219980-3221278 Length = 432 Score = 27.5 bits (58), Expect = 8.5 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = +3 Query: 432 FVNLGKIFDDHYHFHHRSLTKRSLT 506 F LGK+ D H+H HHR K ++ Sbjct: 56 FGELGKV-DHHHHHHHRQHAKNGMS 79 >10_08_0899 - 21430516-21430652,21431399-21431462,21432136-21432164, 21433165-21433378 Length = 147 Score = 27.5 bits (58), Expect = 8.5 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +2 Query: 491 EEIPHAAHEHHGRLEGDSRV 550 E H AH HGRL GD+R+ Sbjct: 110 ESEAHTAHAPHGRLVGDTRL 129 >03_01_0206 - 1625020-1625619,1625722-1625931,1626054-1626094, 1626185-1626234,1626345-1626433,1626534-1626608, 1626721-1626806,1626896-1626956,1627090-1627206, 1627308-1627549,1627983-1628040,1628162-1628284 Length = 583 Score = 27.5 bits (58), Expect = 8.5 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +3 Query: 363 TPTWAVHIPEGREVADAVARDHGFVNLGKIF 455 TPTWAV + V +VA +HG LG F Sbjct: 13 TPTWAVAVVCAVIVLVSVAMEHGLHKLGHWF 43 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,347,999 Number of Sequences: 37544 Number of extensions: 339234 Number of successful extensions: 949 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 919 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 948 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1400060088 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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