Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0498
         (590 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78410-8|CAB01642.1|  556|Caenorhabditis elegans Hypothetical pr...    37   0.012
Z78410-7|CAB01635.1|  652|Caenorhabditis elegans Hypothetical pr...    37   0.012
U04995-1|AAA56868.1|  652|Caenorhabditis elegans prohormone conv...    37   0.012
U41007-7|AAA82268.3|  516|Caenorhabditis elegans Intramembrane p...    28   5.7  
Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical p...    27   10.0 
Z72514-4|CAA96678.1|  204|Caenorhabditis elegans Hypothetical pr...    27   10.0 

>Z78410-8|CAB01642.1|  556|Caenorhabditis elegans Hypothetical
           protein C51E3.7b protein.
          Length = 556

 Score = 36.7 bits (81), Expect = 0.012
 Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 4/42 (9%)
 Frame = +3

Query: 360 YTPTWAVHIPEGREVADA--VARDHGFVNLGKI--FDDHYHF 473
           YT  + VH+ EG  + DA  +A+ HGF+N G++   D+ YHF
Sbjct: 26  YTNHFHVHLKEGGGLEDAHRIAKRHGFINRGQVAASDNEYHF 67


>Z78410-7|CAB01635.1|  652|Caenorhabditis elegans Hypothetical
           protein C51E3.7a protein.
          Length = 652

 Score = 36.7 bits (81), Expect = 0.012
 Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 4/42 (9%)
 Frame = +3

Query: 360 YTPTWAVHIPEGREVADA--VARDHGFVNLGKI--FDDHYHF 473
           YT  + VH+ EG  + DA  +A+ HGF+N G++   D+ YHF
Sbjct: 26  YTNHFHVHLKEGGGLEDAHRIAKRHGFINRGQVAASDNEYHF 67


>U04995-1|AAA56868.1|  652|Caenorhabditis elegans prohormone
           convertase 2 protein.
          Length = 652

 Score = 36.7 bits (81), Expect = 0.012
 Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 4/42 (9%)
 Frame = +3

Query: 360 YTPTWAVHIPEGREVADA--VARDHGFVNLGKI--FDDHYHF 473
           YT  + VH+ EG  + DA  +A+ HGF+N G++   D+ YHF
Sbjct: 26  YTNHFHVHLKEGGGLEDAHRIAKRHGFINRGQVAASDNEYHF 67


>U41007-7|AAA82268.3|  516|Caenorhabditis elegans Intramembrane
           protease (impas)family protein 3 protein.
          Length = 516

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 16/57 (28%), Positives = 26/57 (45%)
 Frame = +2

Query: 383 YTGRKRSCRCRRQGPRLRQSWKDIRRSLPFSSSFTNEEIPHAAHEHHGRLEGDSRVR 553
           Y G KRS    R     R++ K+++ S  F+S   + EI   A    G  + + + R
Sbjct: 65  YLGTKRSANIERDREIAREAEKELKTSSSFNSRKVSREISRRASVSLGDEQAEQQQR 121


>Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical
           protein F49A5.7 protein.
          Length = 411

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 422 PGDGIGNFSSFRYMDGPCWRVM 357
           P + +G    F Y++G CWR++
Sbjct: 142 PSNNVGCTFGFNYINGKCWRLV 163


>Z72514-4|CAA96678.1|  204|Caenorhabditis elegans Hypothetical
           protein T10B10.6 protein.
          Length = 204

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 371 MGRPYTGRKRSCRCRRQGPRLRQSWKDIRRSL 466
           +G+ Y  RK +CR  +  P+LR S  D  ++L
Sbjct: 147 VGKSYCQRKATCRSCKDCPKLRDSIVDFVQAL 178


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,007,210
Number of Sequences: 27780
Number of extensions: 293445
Number of successful extensions: 776
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)