Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0497
         (664 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    26   0.24 
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   2.2  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   5.2  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   5.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.0  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 150 LNIHTNLLWFTYNYCNMKKTAN*CKWLG 233
           L++H  LLW  + YC   K  N  K +G
Sbjct: 297 LSLHGQLLWREFFYCAATKNPNFDKMIG 324


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +1

Query: 547 PKSPTASTSKDTRRDTKKEKSPKTPP 624
           P  PT ST+  T   TK    P T P
Sbjct: 160 PLPPTTSTTTRTTLTTKFTTKPSTKP 185


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = -3

Query: 314 VK*MQAHAMVSGGNLIKTSVLEHHSCSSKPFALVGGFFHIAVIVSK 177
           +K ++ +  V+ GNL K + L+  + + K    +GG+   +V  SK
Sbjct: 65  IKHLEPNLDVNQGNLKKFNALKLKNPNLKTLVAIGGWNEGSVNYSK 110


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 137 FCVHVKHPH 163
           FC+HV+H H
Sbjct: 12  FCLHVQHSH 20


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 658 LIYDYCDTLRIK 623
           L++DYC  LR++
Sbjct: 503 LMFDYCTVLRVQ 514


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,790
Number of Sequences: 336
Number of extensions: 3240
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)