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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0497
         (664 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1296.05c |||cyclin L family cyclin|Schizosaccharomyces pombe...    59   5e-10
SPBC32F12.06 |pch1||cyclin Pch1|Schizosaccharomyces pombe|chr 2|...    38   0.001
SPBC530.13 |||cyclin Ctk2|Schizosaccharomyces pombe|chr 2|||Manual     36   0.004
SPBC18H10.11c |||conserved fungal protein|Schizosaccharomyces po...    28   1.0  
SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA syntheta...    27   2.4  
SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizos...    27   2.4  
SPCC1672.09 |||triglyceride lipase-cholesterol esterase |Schizos...    27   2.4  
SPCC1235.03 |||SMR and CUE domain protein|Schizosaccharomyces po...    27   3.2  
SPCC1322.05c |||leukotriene A-4 hydrolase |Schizosaccharomyces p...    26   4.2  
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo...    26   4.2  
SPBC577.05c |rec27|mug41|meiotic recombination protein Rec27|Sch...    26   4.2  
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig...    26   5.6  
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera...    26   5.6  
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit...    25   7.4  
SPBC3D6.07 |gpi3||pig-A|Schizosaccharomyces pombe|chr 2|||Manual       25   7.4  
SPCC1827.02c |||cholinephosphate cytidylyltransferase |Schizosac...    25   7.4  
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||...    25   7.4  
SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like |Schizosacch...    25   9.7  

>SPAC1296.05c |||cyclin L family cyclin|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 258

 Score = 59.3 bits (137), Expect = 5e-10
 Identities = 27/73 (36%), Positives = 43/73 (58%)
 Frame = +2

Query: 38  AQKTISPMLVDQNYIELKNQVIKAERRILKELGFCVHVKHPHKLIVVYLQLLQYEKNRQL 217
           A+  I+  L  +     +N++   E  +L+ L F  H+  PHKL + YLQ LQ   N++L
Sbjct: 112 ARGFIAHDLYSEEMYSSRNRLSNMELEVLRALNFDTHIVIPHKLAIHYLQTLQLIDNKKL 171

Query: 218 MQMAWNYMNDALR 256
           +Q+ WN++NDA R
Sbjct: 172 LQITWNFLNDASR 184



 Score = 47.6 bits (108), Expect = 2e-06
 Identities = 20/63 (31%), Positives = 39/63 (61%)
 Frame = +1

Query: 250 SKTDVFMRFPPETIACACIYLTARKIGLPLPNNPHWFLLFKVTEDDIREVSMRILQLYKR 429
           S+T + + +PP ++AC CI + AR IG+ LP +  W+ +F  T+++I  ++  +   YK 
Sbjct: 183 SRTRLCVLYPPFSLACGCIAMAARVIGMKLPKD--WYRVFDTTKEEIDSLTSILENFYKT 240

Query: 430 AKV 438
           + +
Sbjct: 241 SAI 243


>SPBC32F12.06 |pch1||cyclin Pch1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 342

 Score = 38.3 bits (85), Expect = 0.001
 Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
 Frame = +2

Query: 38  AQKTISPMLVDQN---YIELKNQVIKAERRILKELGFCVHVKHPHKLIVVYLQLLQYEKN 208
           AQK  S +LVD+    Y   ++ ++  E  +L+ L F   V+HP+  ++ +++    + +
Sbjct: 118 AQKN-SNVLVDEQTKEYWRWRDVILYTEEVLLEALCFDFTVEHPYPYVLSFIKKFVAD-D 175

Query: 209 RQLMQMAWNYMNDALRQMSL*DFLLKPLHVLAFT*RPEK 325
           + + ++AW Y+ND+ R ++   +  K +   AF    EK
Sbjct: 176 KNVTKVAWTYINDSTRSIACLLYSPKTIAAAAFQFALEK 214



 Score = 27.1 bits (57), Expect = 2.4
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
 Frame = +1

Query: 274 FPPETIACACIYLTARKIGLPLPNN----PHWFLLFKVTEDDIREVSMRILQLYKRAKVN 441
           + P+TIA A       K  + L       P W    +V+ +D++ V   I  LYK  K+N
Sbjct: 198 YSPKTIAAAAFQFALEKNEINLSTTTDGLPVWMEESQVSYEDVKGVLTLIDSLYK--KIN 255

Query: 442 PEE 450
           P +
Sbjct: 256 PSK 258


>SPBC530.13 |||cyclin Ctk2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 325

 Score = 36.3 bits (80), Expect = 0.004
 Identities = 19/72 (26%), Positives = 38/72 (52%)
 Frame = +2

Query: 89  KNQVIKAERRILKELGFCVHVKHPHKLIVVYLQLLQYEKNRQLMQMAWNYMNDALRQMSL 268
           + +++  ER  L+ + F   V+HPH  +V + + L++  +     +AWN   DA +  ++
Sbjct: 123 QKRILGLERMTLELICFDFRVRHPHNYMVKFAKSLKFSSS--TASIAWNVCTDAYKTYTM 180

Query: 269 *DFLLKPLHVLA 304
              L  P H++A
Sbjct: 181 ---LKYPAHIVA 189


>SPBC18H10.11c |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 432

 Score = 28.3 bits (60), Expect = 1.0
 Identities = 17/77 (22%), Positives = 36/77 (46%)
 Frame = +2

Query: 17  HHIKQVRAQKTISPMLVDQNYIELKNQVIKAERRILKELGFCVHVKHPHKLIVVYLQLLQ 196
           +++ + R +KT S ++ +  +   KN     ++  L++    ++ +   K  V Y  +LQ
Sbjct: 58  NNLNEFRNKKTKSSLIRNDGFKLAKNVSSLLQKESLEKALHLLYERSNAKKTVAYNLVLQ 117

Query: 197 YEKNRQLMQMAWNYMND 247
           Y   +     AW+  ND
Sbjct: 118 YHLAKGHYNAAWSLYND 134


>SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA synthetases
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 450

 Score = 27.1 bits (57), Expect = 2.4
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +1

Query: 490 ANKHSQE*KIKKLRTKKRNPKSPTASTSKDTRRDTKKEKSPKTPP 624
           A+  S E   K L   K+  ++      K  ++D KKEK+PK PP
Sbjct: 229 ASVKSVEKAPKGLEGAKKEKQNKKEKKDKKDKKD-KKEKAPKEPP 272


>SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 601

 Score = 27.1 bits (57), Expect = 2.4
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +1

Query: 475 RKIYIANKHSQE*KIKKL--RTKKRNPKSPTASTSKDTRR 588
           RK+++   HS   K   L  RTK  +  SP ASTS    R
Sbjct: 118 RKLFLDENHSTNSKPPSLPPRTKSSSQSSPMASTSTSKSR 157


>SPCC1672.09 |||triglyceride lipase-cholesterol esterase
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 467

 Score = 27.1 bits (57), Expect = 2.4
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = +2

Query: 17  HHIKQVRAQKTISPMLVDQNYIELKNQVIKAERRILKELGFCVHVKHPHKLIVVY 181
           H    +R    IS   V+ + +  ++  I    RI K+    +   HP KL VVY
Sbjct: 76  HDAADIREMCKISGYYVEDHLVRTEDDYILCIHRISKDSPGRIGSPHPKKLPVVY 130


>SPCC1235.03 |||SMR and CUE domain protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 399

 Score = 26.6 bits (56), Expect = 3.2
 Identities = 17/58 (29%), Positives = 25/58 (43%)
 Frame = +1

Query: 418 LYKRAKVNPEELETKVENLRKIYIANKHSQE*KIKKLRTKKRNPKSPTASTSKDTRRD 591
           L  RA    E++ET  + L    I ++  Q  K  K  T  R P S   S +++   D
Sbjct: 29  LNHRAIQESEQIETAADALITSNIGHRSRQRKKKTKKATNSRKPLSKFQSNTEEVNED 86


>SPCC1322.05c |||leukotriene A-4 hydrolase |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 612

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = +2

Query: 23  IKQVRAQKTISPMLVDQNYIELKNQVIK---AERRILKELGFCVHVKH 157
           I+  R  + +S +++D +Y+E+KN  I       R+ K  GF     H
Sbjct: 42  IQSARVSQALSHIILDTSYLEIKNVTINDIPTPFRVDKRRGFLGSALH 89


>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
           Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 783

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +1

Query: 445 EELETKVENLRKIYIANKHSQE*KIKKLRTKKRNPKSPTASTSK 576
           +EL  ++E  + + +  K SQ  K   ++ +KR PKS    T K
Sbjct: 510 KELAKEIEMRKSLELKLKLSQSNKAGPVKHRKRRPKSKRRITGK 553


>SPBC577.05c |rec27|mug41|meiotic recombination protein
           Rec27|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 134

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = +1

Query: 370 KVTEDDIREVSMR-ILQLYKRAKVNPEELETKVENLRKIYIANKHSQE*KIKKLRTKKRN 546
           ++ E  + E++++ I +  K+      E +T +EN +K +I +    + KIK+   +K N
Sbjct: 25  EIIEHVLEELNLKNIERRVKKYDQIESEYKTNIENEKKAFIKDVSQVQQKIKEFEIQKAN 84


>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
           E3 |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1647

 Score = 25.8 bits (54), Expect = 5.6
 Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = +2

Query: 62  LVDQNYIELKNQVIKAERRILKELGFCVHVKHPHKLIVV-YLQLLQYEKNRQLMQMAWN 235
           + D  YI++  Q +    R+ K+ G C+ ++H   L  + Y         R  + +A N
Sbjct: 471 MFDMQYIDIAEQALGVLERLSKDFGICI-LEHRGMLAALQYFDFFYTTVQRTAISLAAN 528


>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
           isomerase|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 361

 Score = 25.8 bits (54), Expect = 5.6
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 514 KIKKLRTKKRNPKSPTASTSKDTRRDTKKEKSPKTP 621
           ++KK RTK  + +   AS  K+   +TKK+K   TP
Sbjct: 182 QVKKKRTKDESEQEEAASPKKN---NTKKQKVEGTP 214


>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
            hand and WH2 motif |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1794

 Score = 25.4 bits (53), Expect = 7.4
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 538  KRNPKSPTASTSKDTRRDTKKEKSPKTPPL 627
            + N    +A  S   RRD K+EK    PP+
Sbjct: 961  RHNDSDASAYVSSARRRDFKEEKIESAPPI 990


>SPBC3D6.07 |gpi3||pig-A|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 456

 Score = 25.4 bits (53), Expect = 7.4
 Identities = 15/75 (20%), Positives = 30/75 (40%)
 Frame = +1

Query: 250 SKTDVFMRFPPETIACACIYLTARKIGLPLPNNPHWFLLFKVTEDDIREVSMRILQLYKR 429
           S T+ F     E  +C    ++ +  G+P     H     +  EDD+ +    ++  Y  
Sbjct: 274 SLTEAFGTVLVEAASCGLYVISTKVGGVPEVLPSHMTRFARPEEDDLADTLSSVITDYLD 333

Query: 430 AKVNPEELETKVENL 474
            K+  E    +V+ +
Sbjct: 334 HKIKTETFHEEVKQM 348


>SPCC1827.02c |||cholinephosphate cytidylyltransferase
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 354

 Score = 25.4 bits (53), Expect = 7.4
 Identities = 18/66 (27%), Positives = 29/66 (43%)
 Frame = +1

Query: 418 LYKRAKVNPEELETKVENLRKIYIANKHSQE*KIKKLRTKKRNPKSPTASTSKDTRRDTK 597
           L K  +V P E E  VE   K Y       E + KK   +    +SP+ S  + ++  + 
Sbjct: 5   LAKMYEVEPSEKEDNVERQTKKYNFEIDEPEEQEKKDEKEDDKEESPSKSLEEISQSVSP 64

Query: 598 KEKSPK 615
            E+ P+
Sbjct: 65  VEEEPR 70


>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 3971

 Score = 25.4 bits (53), Expect = 7.4
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +2

Query: 275 FLLKPLH-VLAFT*RPEK*VCRCPITHTGSFYSKLQKMISGKS 400
           FLL P+   L F    E    +  I+HTGSF++ L +  S  S
Sbjct: 15  FLLIPISSALPFQTFEESLKLKSNISHTGSFFANLSQSYSSTS 57


>SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1030

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +2

Query: 32  VRAQ-KTISPMLVDQNYIELKNQVIKAERRILKELGFC 142
           +RAQ K IS  + +   I ++ + +K  +R+L+ LGFC
Sbjct: 815 LRAQIKDISTKITNTEAI-IQLRELKIRQRVLRRLGFC 851


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,631,232
Number of Sequences: 5004
Number of extensions: 52002
Number of successful extensions: 185
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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