BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0497 (664 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC1296.05c |||cyclin L family cyclin|Schizosaccharomyces pombe... 59 5e-10 SPBC32F12.06 |pch1||cyclin Pch1|Schizosaccharomyces pombe|chr 2|... 38 0.001 SPBC530.13 |||cyclin Ctk2|Schizosaccharomyces pombe|chr 2|||Manual 36 0.004 SPBC18H10.11c |||conserved fungal protein|Schizosaccharomyces po... 28 1.0 SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA syntheta... 27 2.4 SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizos... 27 2.4 SPCC1672.09 |||triglyceride lipase-cholesterol esterase |Schizos... 27 2.4 SPCC1235.03 |||SMR and CUE domain protein|Schizosaccharomyces po... 27 3.2 SPCC1322.05c |||leukotriene A-4 hydrolase |Schizosaccharomyces p... 26 4.2 SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 26 4.2 SPBC577.05c |rec27|mug41|meiotic recombination protein Rec27|Sch... 26 4.2 SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 26 5.6 SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 26 5.6 SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 25 7.4 SPBC3D6.07 |gpi3||pig-A|Schizosaccharomyces pombe|chr 2|||Manual 25 7.4 SPCC1827.02c |||cholinephosphate cytidylyltransferase |Schizosac... 25 7.4 SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 25 7.4 SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like |Schizosacch... 25 9.7 >SPAC1296.05c |||cyclin L family cyclin|Schizosaccharomyces pombe|chr 1|||Manual Length = 258 Score = 59.3 bits (137), Expect = 5e-10 Identities = 27/73 (36%), Positives = 43/73 (58%) Frame = +2 Query: 38 AQKTISPMLVDQNYIELKNQVIKAERRILKELGFCVHVKHPHKLIVVYLQLLQYEKNRQL 217 A+ I+ L + +N++ E +L+ L F H+ PHKL + YLQ LQ N++L Sbjct: 112 ARGFIAHDLYSEEMYSSRNRLSNMELEVLRALNFDTHIVIPHKLAIHYLQTLQLIDNKKL 171 Query: 218 MQMAWNYMNDALR 256 +Q+ WN++NDA R Sbjct: 172 LQITWNFLNDASR 184 Score = 47.6 bits (108), Expect = 2e-06 Identities = 20/63 (31%), Positives = 39/63 (61%) Frame = +1 Query: 250 SKTDVFMRFPPETIACACIYLTARKIGLPLPNNPHWFLLFKVTEDDIREVSMRILQLYKR 429 S+T + + +PP ++AC CI + AR IG+ LP + W+ +F T+++I ++ + YK Sbjct: 183 SRTRLCVLYPPFSLACGCIAMAARVIGMKLPKD--WYRVFDTTKEEIDSLTSILENFYKT 240 Query: 430 AKV 438 + + Sbjct: 241 SAI 243 >SPBC32F12.06 |pch1||cyclin Pch1|Schizosaccharomyces pombe|chr 2|||Manual Length = 342 Score = 38.3 bits (85), Expect = 0.001 Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 3/99 (3%) Frame = +2 Query: 38 AQKTISPMLVDQN---YIELKNQVIKAERRILKELGFCVHVKHPHKLIVVYLQLLQYEKN 208 AQK S +LVD+ Y ++ ++ E +L+ L F V+HP+ ++ +++ + + Sbjct: 118 AQKN-SNVLVDEQTKEYWRWRDVILYTEEVLLEALCFDFTVEHPYPYVLSFIKKFVAD-D 175 Query: 209 RQLMQMAWNYMNDALRQMSL*DFLLKPLHVLAFT*RPEK 325 + + ++AW Y+ND+ R ++ + K + AF EK Sbjct: 176 KNVTKVAWTYINDSTRSIACLLYSPKTIAAAAFQFALEK 214 Score = 27.1 bits (57), Expect = 2.4 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 4/63 (6%) Frame = +1 Query: 274 FPPETIACACIYLTARKIGLPLPNN----PHWFLLFKVTEDDIREVSMRILQLYKRAKVN 441 + P+TIA A K + L P W +V+ +D++ V I LYK K+N Sbjct: 198 YSPKTIAAAAFQFALEKNEINLSTTTDGLPVWMEESQVSYEDVKGVLTLIDSLYK--KIN 255 Query: 442 PEE 450 P + Sbjct: 256 PSK 258 >SPBC530.13 |||cyclin Ctk2|Schizosaccharomyces pombe|chr 2|||Manual Length = 325 Score = 36.3 bits (80), Expect = 0.004 Identities = 19/72 (26%), Positives = 38/72 (52%) Frame = +2 Query: 89 KNQVIKAERRILKELGFCVHVKHPHKLIVVYLQLLQYEKNRQLMQMAWNYMNDALRQMSL 268 + +++ ER L+ + F V+HPH +V + + L++ + +AWN DA + ++ Sbjct: 123 QKRILGLERMTLELICFDFRVRHPHNYMVKFAKSLKFSSS--TASIAWNVCTDAYKTYTM 180 Query: 269 *DFLLKPLHVLA 304 L P H++A Sbjct: 181 ---LKYPAHIVA 189 >SPBC18H10.11c |||conserved fungal protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 432 Score = 28.3 bits (60), Expect = 1.0 Identities = 17/77 (22%), Positives = 36/77 (46%) Frame = +2 Query: 17 HHIKQVRAQKTISPMLVDQNYIELKNQVIKAERRILKELGFCVHVKHPHKLIVVYLQLLQ 196 +++ + R +KT S ++ + + KN ++ L++ ++ + K V Y +LQ Sbjct: 58 NNLNEFRNKKTKSSLIRNDGFKLAKNVSSLLQKESLEKALHLLYERSNAKKTVAYNLVLQ 117 Query: 197 YEKNRQLMQMAWNYMND 247 Y + AW+ ND Sbjct: 118 YHLAKGHYNAAWSLYND 134 >SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA synthetases |Schizosaccharomyces pombe|chr 1|||Manual Length = 450 Score = 27.1 bits (57), Expect = 2.4 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +1 Query: 490 ANKHSQE*KIKKLRTKKRNPKSPTASTSKDTRRDTKKEKSPKTPP 624 A+ S E K L K+ ++ K ++D KKEK+PK PP Sbjct: 229 ASVKSVEKAPKGLEGAKKEKQNKKEKKDKKDKKD-KKEKAPKEPP 272 >SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizosaccharomyces pombe|chr 2|||Manual Length = 601 Score = 27.1 bits (57), Expect = 2.4 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Frame = +1 Query: 475 RKIYIANKHSQE*KIKKL--RTKKRNPKSPTASTSKDTRR 588 RK+++ HS K L RTK + SP ASTS R Sbjct: 118 RKLFLDENHSTNSKPPSLPPRTKSSSQSSPMASTSTSKSR 157 >SPCC1672.09 |||triglyceride lipase-cholesterol esterase |Schizosaccharomyces pombe|chr 3|||Manual Length = 467 Score = 27.1 bits (57), Expect = 2.4 Identities = 16/55 (29%), Positives = 24/55 (43%) Frame = +2 Query: 17 HHIKQVRAQKTISPMLVDQNYIELKNQVIKAERRILKELGFCVHVKHPHKLIVVY 181 H +R IS V+ + + ++ I RI K+ + HP KL VVY Sbjct: 76 HDAADIREMCKISGYYVEDHLVRTEDDYILCIHRISKDSPGRIGSPHPKKLPVVY 130 >SPCC1235.03 |||SMR and CUE domain protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 399 Score = 26.6 bits (56), Expect = 3.2 Identities = 17/58 (29%), Positives = 25/58 (43%) Frame = +1 Query: 418 LYKRAKVNPEELETKVENLRKIYIANKHSQE*KIKKLRTKKRNPKSPTASTSKDTRRD 591 L RA E++ET + L I ++ Q K K T R P S S +++ D Sbjct: 29 LNHRAIQESEQIETAADALITSNIGHRSRQRKKKTKKATNSRKPLSKFQSNTEEVNED 86 >SPCC1322.05c |||leukotriene A-4 hydrolase |Schizosaccharomyces pombe|chr 3|||Manual Length = 612 Score = 26.2 bits (55), Expect = 4.2 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Frame = +2 Query: 23 IKQVRAQKTISPMLVDQNYIELKNQVIK---AERRILKELGFCVHVKH 157 I+ R + +S +++D +Y+E+KN I R+ K GF H Sbjct: 42 IQSARVSQALSHIILDTSYLEIKNVTINDIPTPFRVDKRRGFLGSALH 89 >SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizosaccharomyces pombe|chr 1|||Manual Length = 783 Score = 26.2 bits (55), Expect = 4.2 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +1 Query: 445 EELETKVENLRKIYIANKHSQE*KIKKLRTKKRNPKSPTASTSK 576 +EL ++E + + + K SQ K ++ +KR PKS T K Sbjct: 510 KELAKEIEMRKSLELKLKLSQSNKAGPVKHRKRRPKSKRRITGK 553 >SPBC577.05c |rec27|mug41|meiotic recombination protein Rec27|Schizosaccharomyces pombe|chr 2|||Manual Length = 134 Score = 26.2 bits (55), Expect = 4.2 Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Frame = +1 Query: 370 KVTEDDIREVSMR-ILQLYKRAKVNPEELETKVENLRKIYIANKHSQE*KIKKLRTKKRN 546 ++ E + E++++ I + K+ E +T +EN +K +I + + KIK+ +K N Sbjct: 25 EIIEHVLEELNLKNIERRVKKYDQIESEYKTNIENEKKAFIKDVSQVQQKIKEFEIQKAN 84 >SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase E3 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1647 Score = 25.8 bits (54), Expect = 5.6 Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Frame = +2 Query: 62 LVDQNYIELKNQVIKAERRILKELGFCVHVKHPHKLIVV-YLQLLQYEKNRQLMQMAWN 235 + D YI++ Q + R+ K+ G C+ ++H L + Y R + +A N Sbjct: 471 MFDMQYIDIAEQALGVLERLSKDFGICI-LEHRGMLAALQYFDFFYTTVQRTAISLAAN 528 >SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomerase|Schizosaccharomyces pombe|chr 2|||Manual Length = 361 Score = 25.8 bits (54), Expect = 5.6 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +1 Query: 514 KIKKLRTKKRNPKSPTASTSKDTRRDTKKEKSPKTP 621 ++KK RTK + + AS K+ +TKK+K TP Sbjct: 182 QVKKKRTKDESEQEEAASPKKN---NTKKQKVEGTP 214 >SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF hand and WH2 motif |Schizosaccharomyces pombe|chr 1|||Manual Length = 1794 Score = 25.4 bits (53), Expect = 7.4 Identities = 11/30 (36%), Positives = 15/30 (50%) Frame = +1 Query: 538 KRNPKSPTASTSKDTRRDTKKEKSPKTPPL 627 + N +A S RRD K+EK PP+ Sbjct: 961 RHNDSDASAYVSSARRRDFKEEKIESAPPI 990 >SPBC3D6.07 |gpi3||pig-A|Schizosaccharomyces pombe|chr 2|||Manual Length = 456 Score = 25.4 bits (53), Expect = 7.4 Identities = 15/75 (20%), Positives = 30/75 (40%) Frame = +1 Query: 250 SKTDVFMRFPPETIACACIYLTARKIGLPLPNNPHWFLLFKVTEDDIREVSMRILQLYKR 429 S T+ F E +C ++ + G+P H + EDD+ + ++ Y Sbjct: 274 SLTEAFGTVLVEAASCGLYVISTKVGGVPEVLPSHMTRFARPEEDDLADTLSSVITDYLD 333 Query: 430 AKVNPEELETKVENL 474 K+ E +V+ + Sbjct: 334 HKIKTETFHEEVKQM 348 >SPCC1827.02c |||cholinephosphate cytidylyltransferase |Schizosaccharomyces pombe|chr 3|||Manual Length = 354 Score = 25.4 bits (53), Expect = 7.4 Identities = 18/66 (27%), Positives = 29/66 (43%) Frame = +1 Query: 418 LYKRAKVNPEELETKVENLRKIYIANKHSQE*KIKKLRTKKRNPKSPTASTSKDTRRDTK 597 L K +V P E E VE K Y E + KK + +SP+ S + ++ + Sbjct: 5 LAKMYEVEPSEKEDNVERQTKKYNFEIDEPEEQEKKDEKEDDKEESPSKSLEEISQSVSP 64 Query: 598 KEKSPK 615 E+ P+ Sbjct: 65 VEEEPR 70 >SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||Manual Length = 3971 Score = 25.4 bits (53), Expect = 7.4 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = +2 Query: 275 FLLKPLH-VLAFT*RPEK*VCRCPITHTGSFYSKLQKMISGKS 400 FLL P+ L F E + I+HTGSF++ L + S S Sbjct: 15 FLLIPISSALPFQTFEESLKLKSNISHTGSFFANLSQSYSSTS 57 >SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like |Schizosaccharomyces pombe|chr 1|||Manual Length = 1030 Score = 25.0 bits (52), Expect = 9.7 Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%) Frame = +2 Query: 32 VRAQ-KTISPMLVDQNYIELKNQVIKAERRILKELGFC 142 +RAQ K IS + + I ++ + +K +R+L+ LGFC Sbjct: 815 LRAQIKDISTKITNTEAI-IQLRELKIRQRVLRRLGFC 851 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,631,232 Number of Sequences: 5004 Number of extensions: 52002 Number of successful extensions: 185 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 176 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 184 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 301829700 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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