BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0497 (664 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_04_0064 - 15600467-15600528,15600606-15600647,15600732-156011... 69 4e-12 12_02_0362 + 17998110-17998345,17998877-17998958,18000309-180003... 53 2e-07 11_01_0357 + 2715271-2715509,2716200-2716281,2717117-2717251,271... 51 7e-07 02_03_0032 + 14112354-14112417,14112471-14112549,14114435-141145... 37 0.016 01_05_0314 - 20779862-20780286,20780734-20781286 30 1.4 11_01_0373 + 2826646-2826676,2827010-2827268,2828325-2828415 29 2.5 02_01_0262 - 1734447-1735090,1735219-1735367,1735458-1735633,173... 29 3.3 10_08_0497 - 18336819-18337140,18337226-18337360,18337579-183376... 29 4.4 02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937... 29 4.4 09_06_0322 - 22329897-22330078,22330569-22331928 28 7.6 04_04_1600 + 34704527-34704758,34705393-34706777 28 7.6 >01_04_0064 - 15600467-15600528,15600606-15600647,15600732-15601107, 15601186-15601447,15602992-15603158,15603344-15603484, 15603575-15603643 Length = 372 Score = 68.5 bits (160), Expect = 4e-12 Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 1/86 (1%) Frame = +2 Query: 2 VINVFHHIKQVRAQKTISPMLV-DQNYIELKNQVIKAERRILKELGFCVHVKHPHKLIVV 178 +I VFH ++ R I + V + Y +LK+ +++ ER +LKE+GF HV+HPHK I Sbjct: 46 IIIVFHRMECRRENVPIEHLDVFSKKYSDLKHDLVRTERHLLKEMGFICHVEHPHKFISN 105 Query: 179 YLQLLQYEKNRQLMQMAWNYMNDALR 256 YL L+ +L Q AWN ND+LR Sbjct: 106 YLATLEAP---ELTQEAWNLANDSLR 128 Score = 53.2 bits (122), Expect = 2e-07 Identities = 23/61 (37%), Positives = 35/61 (57%) Frame = +1 Query: 253 KTDVFMRFPPETIACACIYLTARKIGLPLPNNPHWFLLFKVTEDDIREVSMRILQLYKRA 432 +T + +RF E +AC +Y AR+ G+PLP +P W+ +F E I+EV + LY Sbjct: 128 RTTLCVRFKSEVVACGVVYAAARRHGVPLPEDPPWWNVFDADEAGIQEVCRVLAHLYSLP 187 Query: 433 K 435 K Sbjct: 188 K 188 >12_02_0362 + 17998110-17998345,17998877-17998958,18000309-18000392, 18000600-18000734,18001395-18001570,18001654-18001805, 18003730-18004575,18004961-18005301 Length = 683 Score = 53.2 bits (122), Expect = 2e-07 Identities = 29/76 (38%), Positives = 45/76 (59%) Frame = +2 Query: 77 YIELKNQVIKAERRILKELGFCVHVKHPHKLIVVYLQLLQYEKNRQLMQMAWNYMNDALR 256 Y + K ++ AER +L LGF ++V HP+K +V ++ + +N L Q+AWN++ND LR Sbjct: 182 YDQQKELILLAERVVLATLGFDLNVHHPYKPLVEAIRKFKVAQN-ALAQVAWNFVNDGLR 240 Query: 257 QMSL*DFLLKPLHVLA 304 F KP H+ A Sbjct: 241 TSLCLQF--KPHHIAA 254 Score = 41.5 bits (93), Expect = 6e-04 Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 2/61 (3%) Frame = +1 Query: 253 KTDVFMRFPPETIACACIYLTAR--KIGLPLPNNPHWFLLFKVTEDDIREVSMRILQLYK 426 +T + ++F P IA I+L A+ K+ LP W+ F VT + EVS ++L+LY+ Sbjct: 240 RTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYE 299 Query: 427 R 429 + Sbjct: 300 Q 300 >11_01_0357 + 2715271-2715509,2716200-2716281,2717117-2717251, 2717428-2717457,2717486-2717661,2717743-2717894, 2718395-2719083 Length = 500 Score = 51.2 bits (117), Expect = 7e-07 Identities = 28/76 (36%), Positives = 44/76 (57%) Frame = +2 Query: 77 YIELKNQVIKAERRILKELGFCVHVKHPHKLIVVYLQLLQYEKNRQLMQMAWNYMNDALR 256 Y + K ++ ER +L LGF ++V HP+K +V ++ + +N L Q+AWN++ND LR Sbjct: 165 YEQQKELILLGERVVLVTLGFDLNVHHPYKPLVEAIKKFKVAQN-ALAQVAWNFVNDGLR 223 Query: 257 QMSL*DFLLKPLHVLA 304 F KP H+ A Sbjct: 224 TSLCLQF--KPHHIAA 237 Score = 45.2 bits (102), Expect = 5e-05 Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 2/66 (3%) Frame = +1 Query: 253 KTDVFMRFPPETIACACIYLTAR--KIGLPLPNNPHWFLLFKVTEDDIREVSMRILQLYK 426 +T + ++F P IA I+L A+ K+ LP W+ F VT + EVS ++L+LY+ Sbjct: 223 RTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYE 282 Query: 427 RAKVNP 444 + +V P Sbjct: 283 QNRVAP 288 >02_03_0032 + 14112354-14112417,14112471-14112549,14114435-14114551, 14114721-14114802,14115734-14115868,14115948-14116123, 14116219-14116370,14116433-14117622 Length = 664 Score = 36.7 bits (81), Expect = 0.016 Identities = 15/56 (26%), Positives = 36/56 (64%) Frame = +2 Query: 89 KNQVIKAERRILKELGFCVHVKHPHKLIVVYLQLLQYEKNRQLMQMAWNYMNDALR 256 K ++ ER +L + F +++HP++ ++ ++ L + +++ Q+AWN++ND L+ Sbjct: 166 KALILTGERLVLTTVRFDFNIQHPYRPLLDAMEKLGISQ-KEVKQVAWNFVNDWLK 220 >01_05_0314 - 20779862-20780286,20780734-20781286 Length = 325 Score = 30.3 bits (65), Expect = 1.4 Identities = 19/64 (29%), Positives = 33/64 (51%) Frame = +1 Query: 436 VNPEELETKVENLRKIYIANKHSQE*KIKKLRTKKRNPKSPTASTSKDTRRDTKKEKSPK 615 +NP LETK + ++ I ++ S +++ +R K R+P SP +T+ D + PK Sbjct: 112 INPNLLETKEK--ARLDIMHEIS---RVQNIRDKYRHPSSPATATAPLAPADVPNKPKPK 166 Query: 616 TPPL 627 L Sbjct: 167 PKDL 170 >11_01_0373 + 2826646-2826676,2827010-2827268,2828325-2828415 Length = 126 Score = 29.5 bits (63), Expect = 2.5 Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 3/79 (3%) Frame = +1 Query: 379 EDDIREVSMRILQLYKRAKVNPE---ELETKVENLRKIYIANKHSQE*KIKKLRTKKRNP 549 E+D R + +L+L + ++ T+ L+KI K + K+KK KK+N Sbjct: 2 EEDQRRARLELLKLINQQFLSHTCTLSQRTRRAELKKILELRKKKAKAKVKKKPKKKKNK 61 Query: 550 KSPTASTSKDTRRDTKKEK 606 K+ K ++ ++E+ Sbjct: 62 KAKKKKKKKKKKKKEEEEE 80 >02_01_0262 - 1734447-1735090,1735219-1735367,1735458-1735633, 1735719-1735853,1737039-1737120,1737307-1737461 Length = 446 Score = 29.1 bits (62), Expect = 3.3 Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = +1 Query: 253 KTDVFMRFPPETIACACIYLTARKIGLPLPNNPH-WFLLFKVTEDDIREVSMRILQLY 423 +T + ++F P IA +YL A+ LP++ W+ F V ++ V ++ +L+ Sbjct: 185 RTTLVVQFKPHYIAAGSLYLAAKFNNFRLPSDGKVWWHEFDVAPKQLQAVIQQMTELF 242 >10_08_0497 - 18336819-18337140,18337226-18337360,18337579-18337673, 18337759-18337845,18337923-18338129,18338209-18338535, 18338711-18338803,18338861-18339175,18339283-18339792, 18339889-18339960,18341209-18341256,18341427-18341551, 18341640-18341661 Length = 785 Score = 28.7 bits (61), Expect = 4.4 Identities = 17/37 (45%), Positives = 22/37 (59%) Frame = +1 Query: 502 SQE*KIKKLRTKKRNPKSPTASTSKDTRRDTKKEKSP 612 SQ K KK ++KKRN + P+ S T+R KEK P Sbjct: 744 SQWKKQKKEKSKKRNKRQPSKKGSSTTKR---KEKIP 777 >02_04_0516 + 23593088-23593116,23593209-23593336,23593527-23593714, 23593861-23593919,23594997-23595345,23596081-23596333, 23596404-23597476 Length = 692 Score = 28.7 bits (61), Expect = 4.4 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = +1 Query: 454 ETKVENLRKIYIANKHSQE*KIKKLRTKKRNPKSPTASTSKDTRRDTKKEKSPK 615 E VEN ++ I N + K KK + KK+ K +K ++ KK+K K Sbjct: 50 EDDVENYQQENIWNPVVMKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKK 103 Score = 28.3 bits (60), Expect = 5.8 Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Frame = +1 Query: 436 VNPEELET-KVENLRKIYIANKHSQE*KIKKLRTKKRNPKSPTASTSKDTRRDTKKEKSP 612 ++ +++E + EN+ + K ++ K KK + KK+ K K ++ KK+K Sbjct: 48 IDEDDVENYQQENIWNPVVMKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKK 107 Query: 613 KTP 621 + P Sbjct: 108 RWP 110 >09_06_0322 - 22329897-22330078,22330569-22331928 Length = 513 Score = 27.9 bits (59), Expect = 7.6 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 4/53 (7%) Frame = -2 Query: 363 KEPVWVIGQRQTYFSGRQV-NASTCNGFRRKSHK---DICLRASFM*FQAICI 217 + P WV+ + YF+G V NA+T R+ H+ +C A +C+ Sbjct: 26 RRPRWVLLDKLAYFAGADVRNATTATSKTREGHEIQVTLCTAAQPQLVSYVCV 78 >04_04_1600 + 34704527-34704758,34705393-34706777 Length = 538 Score = 27.9 bits (59), Expect = 7.6 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +1 Query: 331 LPLPNNPHWFLLFKVTEDDIREVSMRILQLYKRAKVNPEELE 456 L +P +P W L+ K D+ REV +++ AK E+E Sbjct: 238 LVIPESPRW-LVMKNRADEAREVLLKVTDSEDEAKERLAEIE 278 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,339,320 Number of Sequences: 37544 Number of extensions: 311761 Number of successful extensions: 852 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 810 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 846 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1667659452 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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