Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0497
(664 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_04_0064 - 15600467-15600528,15600606-15600647,15600732-156011... 69 4e-12
12_02_0362 + 17998110-17998345,17998877-17998958,18000309-180003... 53 2e-07
11_01_0357 + 2715271-2715509,2716200-2716281,2717117-2717251,271... 51 7e-07
02_03_0032 + 14112354-14112417,14112471-14112549,14114435-141145... 37 0.016
01_05_0314 - 20779862-20780286,20780734-20781286 30 1.4
11_01_0373 + 2826646-2826676,2827010-2827268,2828325-2828415 29 2.5
02_01_0262 - 1734447-1735090,1735219-1735367,1735458-1735633,173... 29 3.3
10_08_0497 - 18336819-18337140,18337226-18337360,18337579-183376... 29 4.4
02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937... 29 4.4
09_06_0322 - 22329897-22330078,22330569-22331928 28 7.6
04_04_1600 + 34704527-34704758,34705393-34706777 28 7.6
>01_04_0064 -
15600467-15600528,15600606-15600647,15600732-15601107,
15601186-15601447,15602992-15603158,15603344-15603484,
15603575-15603643
Length = 372
Score = 68.5 bits (160), Expect = 4e-12
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +2
Query: 2 VINVFHHIKQVRAQKTISPMLV-DQNYIELKNQVIKAERRILKELGFCVHVKHPHKLIVV 178
+I VFH ++ R I + V + Y +LK+ +++ ER +LKE+GF HV+HPHK I
Sbjct: 46 IIIVFHRMECRRENVPIEHLDVFSKKYSDLKHDLVRTERHLLKEMGFICHVEHPHKFISN 105
Query: 179 YLQLLQYEKNRQLMQMAWNYMNDALR 256
YL L+ +L Q AWN ND+LR
Sbjct: 106 YLATLEAP---ELTQEAWNLANDSLR 128
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +1
Query: 253 KTDVFMRFPPETIACACIYLTARKIGLPLPNNPHWFLLFKVTEDDIREVSMRILQLYKRA 432
+T + +RF E +AC +Y AR+ G+PLP +P W+ +F E I+EV + LY
Sbjct: 128 RTTLCVRFKSEVVACGVVYAAARRHGVPLPEDPPWWNVFDADEAGIQEVCRVLAHLYSLP 187
Query: 433 K 435
K
Sbjct: 188 K 188
>12_02_0362 +
17998110-17998345,17998877-17998958,18000309-18000392,
18000600-18000734,18001395-18001570,18001654-18001805,
18003730-18004575,18004961-18005301
Length = 683
Score = 53.2 bits (122), Expect = 2e-07
Identities = 29/76 (38%), Positives = 45/76 (59%)
Frame = +2
Query: 77 YIELKNQVIKAERRILKELGFCVHVKHPHKLIVVYLQLLQYEKNRQLMQMAWNYMNDALR 256
Y + K ++ AER +L LGF ++V HP+K +V ++ + +N L Q+AWN++ND LR
Sbjct: 182 YDQQKELILLAERVVLATLGFDLNVHHPYKPLVEAIRKFKVAQN-ALAQVAWNFVNDGLR 240
Query: 257 QMSL*DFLLKPLHVLA 304
F KP H+ A
Sbjct: 241 TSLCLQF--KPHHIAA 254
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +1
Query: 253 KTDVFMRFPPETIACACIYLTAR--KIGLPLPNNPHWFLLFKVTEDDIREVSMRILQLYK 426
+T + ++F P IA I+L A+ K+ LP W+ F VT + EVS ++L+LY+
Sbjct: 240 RTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYE 299
Query: 427 R 429
+
Sbjct: 300 Q 300
>11_01_0357 +
2715271-2715509,2716200-2716281,2717117-2717251,
2717428-2717457,2717486-2717661,2717743-2717894,
2718395-2719083
Length = 500
Score = 51.2 bits (117), Expect = 7e-07
Identities = 28/76 (36%), Positives = 44/76 (57%)
Frame = +2
Query: 77 YIELKNQVIKAERRILKELGFCVHVKHPHKLIVVYLQLLQYEKNRQLMQMAWNYMNDALR 256
Y + K ++ ER +L LGF ++V HP+K +V ++ + +N L Q+AWN++ND LR
Sbjct: 165 YEQQKELILLGERVVLVTLGFDLNVHHPYKPLVEAIKKFKVAQN-ALAQVAWNFVNDGLR 223
Query: 257 QMSL*DFLLKPLHVLA 304
F KP H+ A
Sbjct: 224 TSLCLQF--KPHHIAA 237
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +1
Query: 253 KTDVFMRFPPETIACACIYLTAR--KIGLPLPNNPHWFLLFKVTEDDIREVSMRILQLYK 426
+T + ++F P IA I+L A+ K+ LP W+ F VT + EVS ++L+LY+
Sbjct: 223 RTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYE 282
Query: 427 RAKVNP 444
+ +V P
Sbjct: 283 QNRVAP 288
>02_03_0032 +
14112354-14112417,14112471-14112549,14114435-14114551,
14114721-14114802,14115734-14115868,14115948-14116123,
14116219-14116370,14116433-14117622
Length = 664
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/56 (26%), Positives = 36/56 (64%)
Frame = +2
Query: 89 KNQVIKAERRILKELGFCVHVKHPHKLIVVYLQLLQYEKNRQLMQMAWNYMNDALR 256
K ++ ER +L + F +++HP++ ++ ++ L + +++ Q+AWN++ND L+
Sbjct: 166 KALILTGERLVLTTVRFDFNIQHPYRPLLDAMEKLGISQ-KEVKQVAWNFVNDWLK 220
>01_05_0314 - 20779862-20780286,20780734-20781286
Length = 325
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +1
Query: 436 VNPEELETKVENLRKIYIANKHSQE*KIKKLRTKKRNPKSPTASTSKDTRRDTKKEKSPK 615
+NP LETK + ++ I ++ S +++ +R K R+P SP +T+ D + PK
Sbjct: 112 INPNLLETKEK--ARLDIMHEIS---RVQNIRDKYRHPSSPATATAPLAPADVPNKPKPK 166
Query: 616 TPPL 627
L
Sbjct: 167 PKDL 170
>11_01_0373 + 2826646-2826676,2827010-2827268,2828325-2828415
Length = 126
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +1
Query: 379 EDDIREVSMRILQLYKRAKVNPE---ELETKVENLRKIYIANKHSQE*KIKKLRTKKRNP 549
E+D R + +L+L + ++ T+ L+KI K + K+KK KK+N
Sbjct: 2 EEDQRRARLELLKLINQQFLSHTCTLSQRTRRAELKKILELRKKKAKAKVKKKPKKKKNK 61
Query: 550 KSPTASTSKDTRRDTKKEK 606
K+ K ++ ++E+
Sbjct: 62 KAKKKKKKKKKKKKEEEEE 80
>02_01_0262 -
1734447-1735090,1735219-1735367,1735458-1735633,
1735719-1735853,1737039-1737120,1737307-1737461
Length = 446
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 253 KTDVFMRFPPETIACACIYLTARKIGLPLPNNPH-WFLLFKVTEDDIREVSMRILQLY 423
+T + ++F P IA +YL A+ LP++ W+ F V ++ V ++ +L+
Sbjct: 185 RTTLVVQFKPHYIAAGSLYLAAKFNNFRLPSDGKVWWHEFDVAPKQLQAVIQQMTELF 242
>10_08_0497 -
18336819-18337140,18337226-18337360,18337579-18337673,
18337759-18337845,18337923-18338129,18338209-18338535,
18338711-18338803,18338861-18339175,18339283-18339792,
18339889-18339960,18341209-18341256,18341427-18341551,
18341640-18341661
Length = 785
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +1
Query: 502 SQE*KIKKLRTKKRNPKSPTASTSKDTRRDTKKEKSP 612
SQ K KK ++KKRN + P+ S T+R KEK P
Sbjct: 744 SQWKKQKKEKSKKRNKRQPSKKGSSTTKR---KEKIP 777
>02_04_0516 +
23593088-23593116,23593209-23593336,23593527-23593714,
23593861-23593919,23594997-23595345,23596081-23596333,
23596404-23597476
Length = 692
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 454 ETKVENLRKIYIANKHSQE*KIKKLRTKKRNPKSPTASTSKDTRRDTKKEKSPK 615
E VEN ++ I N + K KK + KK+ K +K ++ KK+K K
Sbjct: 50 EDDVENYQQENIWNPVVMKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKK 103
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 436 VNPEELET-KVENLRKIYIANKHSQE*KIKKLRTKKRNPKSPTASTSKDTRRDTKKEKSP 612
++ +++E + EN+ + K ++ K KK + KK+ K K ++ KK+K
Sbjct: 48 IDEDDVENYQQENIWNPVVMKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKK 107
Query: 613 KTP 621
+ P
Sbjct: 108 RWP 110
>09_06_0322 - 22329897-22330078,22330569-22331928
Length = 513
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = -2
Query: 363 KEPVWVIGQRQTYFSGRQV-NASTCNGFRRKSHK---DICLRASFM*FQAICI 217
+ P WV+ + YF+G V NA+T R+ H+ +C A +C+
Sbjct: 26 RRPRWVLLDKLAYFAGADVRNATTATSKTREGHEIQVTLCTAAQPQLVSYVCV 78
>04_04_1600 + 34704527-34704758,34705393-34706777
Length = 538
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 331 LPLPNNPHWFLLFKVTEDDIREVSMRILQLYKRAKVNPEELE 456
L +P +P W L+ K D+ REV +++ AK E+E
Sbjct: 238 LVIPESPRW-LVMKNRADEAREVLLKVTDSEDEAKERLAEIE 278
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,339,320
Number of Sequences: 37544
Number of extensions: 311761
Number of successful extensions: 852
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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