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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0497
         (664 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_59567| Best HMM Match : Cyclin_N (HMM E-Value=3.3e-07)              39   0.004
SB_45217| Best HMM Match : Linker_histone (HMM E-Value=4.4e-27)        38   0.007
SB_28497| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.21 
SB_15826| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.21 
SB_13359| Best HMM Match : DMAP1 (HMM E-Value=0)                       33   0.27 
SB_2413| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   1.1  
SB_36680| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.9  
SB_47526| Best HMM Match : Churchill (HMM E-Value=0.52)                29   3.4  
SB_46961| Best HMM Match : DUF663 (HMM E-Value=0)                      29   3.4  
SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.4  
SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43)           29   4.5  
SB_39987| Best HMM Match : FtsL (HMM E-Value=0.4)                      29   4.5  
SB_23319| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.9  
SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71)                  28   5.9  
SB_32504| Best HMM Match : TolA (HMM E-Value=0.52)                     28   5.9  
SB_17350| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.9  
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)                  28   7.8  
SB_19489| Best HMM Match : TP2 (HMM E-Value=0.58)                      28   7.8  
SB_10637| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.8  
SB_385| Best HMM Match : SRP54_N (HMM E-Value=1.1)                     28   7.8  
SB_159| Best HMM Match : TP2 (HMM E-Value=0.58)                        28   7.8  
SB_6719| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   7.8  

>SB_59567| Best HMM Match : Cyclin_N (HMM E-Value=3.3e-07)
          Length = 282

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 22/71 (30%), Positives = 41/71 (57%)
 Frame = +2

Query: 92  NQVIKAERRILKELGFCVHVKHPHKLIVVYLQLLQYEKNRQLMQMAWNYMNDALRQMSL* 271
           NQV++ E  +L+ L  C+ + HP++ +  Y+  L  E+   ++  AW  +ND+LR     
Sbjct: 134 NQVLECEFYLLEMLDCCLIIYHPYRPLTQYVSDLGMEE--AILPTAWRIINDSLRTDI-- 189

Query: 272 DFLLKPLHVLA 304
            FL+ P +++A
Sbjct: 190 -FLIYPPYLIA 199



 Score = 38.7 bits (86), Expect = 0.004
 Identities = 22/70 (31%), Positives = 37/70 (52%)
 Frame = +1

Query: 253 KTDVFMRFPPETIACACIYLTARKIGLPLPNNPHWFLLFKVTEDDIREVSMRILQLYKRA 432
           +TD+F+ +PP  IA A I++      +   ++  WF    V  D I E++  IL+LY+  
Sbjct: 186 RTDIFLIYPPYLIALAAIHMAC---VIQQKDSKQWFAELSVDMDQIVEITHHILRLYEIW 242

Query: 433 KVNPEELETK 462
           K   E+ E +
Sbjct: 243 KNFEEKQEIR 252


>SB_45217| Best HMM Match : Linker_histone (HMM E-Value=4.4e-27)
          Length = 228

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 23/85 (27%), Positives = 37/85 (43%)
 Frame = +1

Query: 367 FKVTEDDIREVSMRILQLYKRAKVNPEELETKVENLRKIYIANKHSQE*KIKKLRTKKRN 546
           FK+++D  +E  M   +   + +   ++LE +     K+    K     K KK +     
Sbjct: 82  FKLSQDTKKEGEMAEKKAKAKERKLQKQLEKEAAEEEKVKKPKKSRDGEKTKKSKKVTSE 141

Query: 547 PKSPTASTSKDTRRDTKKEKSPKTP 621
           PKSP    SKD    T K+   K+P
Sbjct: 142 PKSPKVKKSKDKSTKTTKKSDAKSP 166


>SB_28497| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 292

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
 Frame = +1

Query: 406 RILQLYKRAKVNPEELETKVENLRKIYIANKHSQE*K--IKKLRTKKRNPKSPTASTSKD 579
           ++L+LY R +   +E E  +  LRKI +  K  ++ +  ++KL T   N      + +K+
Sbjct: 180 QLLKLYNRTQEQVQEEEMLMAELRKIEMRKKEREKKQQDLQKLITAAENSAEYRQNLAKE 239

Query: 580 TRRDTKKEKSP 612
              + ++EK+P
Sbjct: 240 KTNNFRREKNP 250


>SB_15826| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 325

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +1

Query: 451 LETKVENLRKIYIANKHSQE*KIKKLRTKKRNPKSPTASTSKDTRRDTK 597
           L+TK+ ++ +   + K SQ  + KK + KK+    P   TS  TR+D+K
Sbjct: 28  LQTKMADVTRSLPSEKSSQN-QAKKRKKKKQKTHRPVTETSPSTRKDSK 75


>SB_13359| Best HMM Match : DMAP1 (HMM E-Value=0)
          Length = 535

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
 Frame = +1

Query: 406 RILQLYKRAKVNPEELETKVENLRKIYIANKHSQE*K--IKKLRTKKRNPKSPTASTSKD 579
           ++L+LY R +   +E E  +  LRKI +  K  ++ +  ++KL T   N      + +K+
Sbjct: 303 QLLKLYNRTQEQVQEEEMLMAELRKIEMRKKEREKKQQDLQKLITAAENSAEYRQNLAKE 362

Query: 580 TRRDTKKEKSP 612
              + ++EK P
Sbjct: 363 KTNNFRREKKP 373


>SB_2413| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 493

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 20/56 (35%), Positives = 30/56 (53%)
 Frame = +1

Query: 451 LETKVENLRKIYIANKHSQE*KIKKLRTKKRNPKSPTASTSKDTRRDTKKEKSPKT 618
           L+  VEN+  +  AN+   E + K  R +K  P +P    +K  +RD KK+KS  T
Sbjct: 45  LKDLVENIPDLP-ANEEEGEGEPKPKR-RKAQPSAPKEKQTKSRKRDKKKDKSALT 98


>SB_36680| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 326

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 17/68 (25%), Positives = 31/68 (45%)
 Frame = +1

Query: 412 LQLYKRAKVNPEELETKVENLRKIYIANKHSQE*KIKKLRTKKRNPKSPTASTSKDTRRD 591
           + ++   K   ++ ETK +    + I        + KK + K + PK+    + KD +  
Sbjct: 126 VSVFDCVKEETQDEETKQDQACIMAIEEMFPPVRQKKKAKRKNQRPKASQCRSRKDIKEC 185

Query: 592 TKKEKSPK 615
           TKKE  P+
Sbjct: 186 TKKEDEPE 193


>SB_47526| Best HMM Match : Churchill (HMM E-Value=0.52)
          Length = 890

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +1

Query: 388 IREVSMRILQLYKRAKVNPEELETKVENLRKIYIANKHS 504
           +  V  ++  LY RAK +P  LET  + +  +YI  K+S
Sbjct: 183 LETVQQKMTLLYLRAKNSPHILETDQQEMTLLYIRAKNS 221



 Score = 29.1 bits (62), Expect = 3.4
 Identities = 19/54 (35%), Positives = 31/54 (57%)
 Frame = +1

Query: 343 NNPHWFLLFKVTEDDIREVSMRILQLYKRAKVNPEELETKVENLRKIYIANKHS 504
           N+PH      + E D +E+++    LY RAK +P +LET  + +  +YI  K+S
Sbjct: 199 NSPH------ILETDQQEMTL----LYIRAKNSPHKLETVQQEMTLLYIRAKNS 242



 Score = 29.1 bits (62), Expect = 3.4
 Identities = 19/54 (35%), Positives = 31/54 (57%)
 Frame = +1

Query: 343 NNPHWFLLFKVTEDDIREVSMRILQLYKRAKVNPEELETKVENLRKIYIANKHS 504
           N+PH      + E D +E+++    LY RAK +P +LET  + +  +YI  K+S
Sbjct: 409 NSPH------ILETDQQEMTL----LYIRAKNSPHKLETVQQEMTLLYIRAKNS 452



 Score = 29.1 bits (62), Expect = 3.4
 Identities = 19/54 (35%), Positives = 31/54 (57%)
 Frame = +1

Query: 343 NNPHWFLLFKVTEDDIREVSMRILQLYKRAKVNPEELETKVENLRKIYIANKHS 504
           N+PH      + E D +E+++    LY RAK +P +LET  + +  +YI  K+S
Sbjct: 829 NSPH------ILETDQQEMTL----LYIRAKNSPHKLETVQQEMTLLYIRAKNS 872


>SB_46961| Best HMM Match : DUF663 (HMM E-Value=0)
          Length = 491

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
 Frame = +1

Query: 313 TARKIGLPLPNNPHWFLLFKVTEDDIREVSMRILQLYKRAKVNPEELETKVENL-RKIYI 489
           T R   L +P      L FK    D ++     L+  +   + P+E   KV +L +++Y 
Sbjct: 375 TRRFNPLVIPKKLQKDLPFKSKPKDAKKRQRPSLESKRAVVMEPQE--KKVYSLMQQLYT 432

Query: 490 ANKHSQE*KIKKLRTKKRNPKSPTASTSKDTRRDTKKEKSPK 615
           ANK     + +KL  K++  ++  A    D++R TK+ +  K
Sbjct: 433 ANKEKLRKRKEKLVQKRKVHRAEQAKI--DSKRQTKRREERK 472


>SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1000

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
 Frame = +1

Query: 394 EVSMRILQLYKRAK-VNPEELETKVENLRKIYIANKHSQE*KIKKLRTKKRNPKSPTAST 570
           +V  R+  + + +K + PEE + +++   KI IA +  +  ++KKL  K  N + PT+ T
Sbjct: 205 DVRSRLESVQEESKELTPEEQQERIK-AEKIRIALEKLRAARVKKLVVKVYNDEDPTSKT 263


>SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43)
          Length = 1806

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = +1

Query: 379  EDDIREVSMRILQLYKRAKVNPEELETKVENLRKIYIANKHSQE*KIKKLRTKKRNPKSP 558
            E ++ +   R  +  +RA+  PEE +T    LRK         E K K+ RT +R  KSP
Sbjct: 1477 ETEVPDNGGRETRSKRRAQNAPEEDKTVKRTLRKRTSEPTKQYEPKTKQTRTSRR-AKSP 1535

Query: 559  TASTSKD 579
              +  K+
Sbjct: 1536 AGAEKKN 1542


>SB_39987| Best HMM Match : FtsL (HMM E-Value=0.4)
          Length = 573

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 20/86 (23%), Positives = 39/86 (45%)
 Frame = +1

Query: 355 WFLLFKVTEDDIREVSMRILQLYKRAKVNPEELETKVENLRKIYIANKHSQE*KIKKLRT 534
           W  + K   +  + V  R+L   +  KV+P + E   +++ K   A   S          
Sbjct: 297 WRNVVKRVFESTKAVPSRVLMRLRHQKVDPSQEELVAKSVTKPGTARMPS--------TA 348

Query: 535 KKRNPKSPTASTSKDTRRDTKKEKSP 612
           ++RN ++ + +T+   + DT KE +P
Sbjct: 349 RQRNQQTQSRATAGGIKMDTPKENTP 374


>SB_23319| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 310

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = +1

Query: 445 EELETKVENLRKIYIANKHSQE*KIKKL-----RTKKRNPKSPTASTSKDTRRDTKKEKS 609
           E +  + +++R+I    K  QE + K++       KK+  K  +A   +  + +TKK K 
Sbjct: 72  ESMNYEEDDVRRILEDLKVEQEEQKKRMARELEEAKKKVAKEKSAKPKESKKPETKKPKK 131

Query: 610 PKTPP 624
           P T P
Sbjct: 132 PDTAP 136


>SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71)
          Length = 1281

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 529 RTKKRNPKSPTASTSKDTRRDTKKEKSPK 615
           +TK+  P+   A+  K  RR TKK K+ K
Sbjct: 211 KTKRSKPQDKQAARPKQPRRKTKKSKTSK 239


>SB_32504| Best HMM Match : TolA (HMM E-Value=0.52)
          Length = 422

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = +1

Query: 424 KRAKVNPEELETKVENLRKIYIANKHSQE*KIKKLRTKKRNPKS-PTASTSKDTRRDTKK 600
           K  K   E+   K E   K     K  +E + +K +TKK   +S     T K+ +   +K
Sbjct: 134 KEEKKEKEKERMKKEEKHKEK-TRKEEKEREKEKEKTKKEEKESREKEKTKKEEKESKEK 192

Query: 601 EKSPKTPP 624
           +K  K PP
Sbjct: 193 DKQKKDPP 200


>SB_17350| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2956

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
 Frame = +1

Query: 361 LLFKVTEDDIREVSMRILQLYKRAKVNPEE--LETKVENLRKIY-IANKHSQE*KIKKLR 531
           L++K  E+ + E   +   LY    V  ++   E   EN+  I  I   H +E K  +  
Sbjct: 161 LVYKAVEELVNEELRKQNHLYVNVSVGDQQGGEEQNYENVAFIRSIQRLHLEEKKASRPP 220

Query: 532 TKKRNPKSPTASTSKDTRRDTKKEKSPKT 618
             +  P  P  +TSK        E  PKT
Sbjct: 221 ENRPIPTPPRETTSKTQEPKNVMELPPKT 249


>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
          Length = 765

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = +1

Query: 451 LETKVENLRKIYIANKHSQE*KIKKLRTKKRNPKSPTASTSKDTRRDTKKEKSPKT 618
           LE+KV++  K       S+  K  K + K R+ +S +   ++DT +D K  +SP T
Sbjct: 153 LESKVQSNEKDTDEKLSSKLLKCLKDKHKSRS-RSNSKDKAQDTEKDRKSSRSPST 207


>SB_19489| Best HMM Match : TP2 (HMM E-Value=0.58)
          Length = 429

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 520 KKLRTKKRNPKSPTASTSKDTRRDTKKEKSPKT 618
           +K  T+ +N   PT S S D+RR TK   S  T
Sbjct: 138 QKQSTESKNIPGPTNSISSDSRRITKTTNSNST 170


>SB_10637| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 200

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = -2

Query: 384 IFCNFE*KEPV--WVIGQRQTYFSGRQVNASTCNGFRR 277
           IF  FE  E V  W  G R+T+F    V+A+    FRR
Sbjct: 19  IFQRFETFESVLVWTAGSRRTHFENDNVDANQVMRFRR 56


>SB_385| Best HMM Match : SRP54_N (HMM E-Value=1.1)
          Length = 210

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 20/61 (32%), Positives = 29/61 (47%)
 Frame = +1

Query: 442 PEELETKVENLRKIYIANKHSQE*KIKKLRTKKRNPKSPTASTSKDTRRDTKKEKSPKTP 621
           P + + K E+  K    +K S+     K  TKK + KSP  S    T + T  +K+PK  
Sbjct: 65  PPKKKKKAESKPKSAEKSKSSKSKTPAKKETKKESKKSPKKS-KPVTVKITSGKKTPKKS 123

Query: 622 P 624
           P
Sbjct: 124 P 124


>SB_159| Best HMM Match : TP2 (HMM E-Value=0.58)
          Length = 429

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 520 KKLRTKKRNPKSPTASTSKDTRRDTKKEKSPKT 618
           +K  T+ +N   PT S S D+RR TK   S  T
Sbjct: 138 QKQSTESKNIPGPTNSISSDSRRITKTTNSNST 170


>SB_6719| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 437

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
 Frame = +1

Query: 373 VTEDDIREVSMR--ILQLYKRAKVNPEELETKVENLR--KIYIANKHSQE*KIKKLRTKK 540
           V E DI +   R  ILQL +  ++    L ++V N    K  ++       K+KK R KK
Sbjct: 346 VIETDIMKNYFRQHILQLLREYRIRKGTLPSRVTNTDNYKSRLSINEIVSKKLKKKRKKK 405

Query: 541 RNPKSPTASTSKDTRRDTKKEKSPK 615
           +N K    +  +  R+  +K    K
Sbjct: 406 KNRKLRKRNRKRKQRKLARKRLKEK 430


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,105,549
Number of Sequences: 59808
Number of extensions: 372701
Number of successful extensions: 1301
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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