Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0497
         (664 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.         146   5e-37
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          33   0.011
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    31   0.025
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    23   6.5  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   6.5  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score =  146 bits (354), Expect = 5e-37
 Identities = 63/85 (74%), Positives = 78/85 (91%)
 Frame = +2

Query: 2   VINVFHHIKQVRAQKTISPMLVDQNYIELKNQVIKAERRILKELGFCVHVKHPHKLIVVY 181
           VINVFHHIKQVR+QK + PM++DQ+YI LK+QVIKAERR+LKELGFCVHVKHPHKLIV+Y
Sbjct: 144 VINVFHHIKQVRSQKPLLPMILDQHYINLKSQVIKAERRVLKELGFCVHVKHPHKLIVMY 203

Query: 182 LQLLQYEKNRQLMQMAWNYMNDALR 256
           L+ L+ EK++ +MQMAWN+MND+ R
Sbjct: 204 LKYLELEKHQNMMQMAWNFMNDSFR 228



 Score =  112 bits (269), Expect = 1e-26
 Identities = 50/78 (64%), Positives = 62/78 (79%)
 Frame = +1

Query: 253 KTDVFMRFPPETIACACIYLTARKIGLPLPNNPHWFLLFKVTEDDIREVSMRILQLYKRA 432
           +TDVF+R+ PETIACACIYLTARK  +PLPNNP WF++F+V+EDD+ +V  RI+ LYKR 
Sbjct: 228 RTDVFVRYQPETIACACIYLTARKHNIPLPNNPPWFVIFRVSEDDMLDVCYRIMALYKRG 287

Query: 433 KVNPEELETKVENLRKIY 486
           K N E LE  VE L+K Y
Sbjct: 288 KPNAELLEEAVEALKKKY 305


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 32.7 bits (71), Expect = 0.011
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +2

Query: 2   VINVFHHIKQVRAQKTI-SPMLVDQNYIELKNQVIKAERRILKE 130
           VINVFHHIKQVR+Q  +       + Y+ LK  +     R+ K+
Sbjct: 144 VINVFHHIKQVRSQNFVGKTQSYSKLYLLLKATLSAQSFRVQKK 187


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 31.5 bits (68), Expect = 0.025
 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
 Frame = +1

Query: 385 DIREVSMRILQL-YKRAKVNPEELETKVENLRKIYIANKHSQ---E*KIKKLRTKKRNPK 552
           ++  +  R+ Q  +++ K   EEL  K+E L+K  +  + +Q     K+K L+ K  + K
Sbjct: 723 ELNNLKQRLAQTSFQQTKEEIEELNKKIETLQKTIVEARETQTQCSAKVKDLQAKIADGK 782

Query: 553 SPTASTSKDTRRDTKKEK 606
                  K    D K+ K
Sbjct: 783 GHRERELKSAEEDLKRSK 800


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 415 QLYKRAKVNPEELETKVENLRKIYIANK 498
           +LY+   V+P +L  K +  RK+Y   K
Sbjct: 106 KLYQPTDVSPPKLSPKEDYYRKLYRGEK 133


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = +1

Query: 289 IACACIYLTARKIGLPLPNN-PHWFLLFKVTEDDIREVSMRILQLYKRAKVNPEELETKV 465
           IA AC     R+ G P P    +W+     TE  I +     ++   R K+N  +   + 
Sbjct: 250 IANACDTSLPRRKGGPYPRRRAYWW----TTE--IAQCRSHCIEA--RRKMNRAKSSEQR 301

Query: 466 ENLRKIYIANKHSQE*KIK 522
           E+LR++YI  + + + KIK
Sbjct: 302 EDLRRLYILARSNLKRKIK 320


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,283
Number of Sequences: 2352
Number of extensions: 11843
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)