BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0497 (664 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein. 146 5e-37 CR954256-2|CAJ14143.1| 295|Anopheles gambiae cyclin protein. 33 0.011 AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 31 0.025 AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox prote... 23 6.5 AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 23 6.5 >CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein. Length = 659 Score = 146 bits (354), Expect = 5e-37 Identities = 63/85 (74%), Positives = 78/85 (91%) Frame = +2 Query: 2 VINVFHHIKQVRAQKTISPMLVDQNYIELKNQVIKAERRILKELGFCVHVKHPHKLIVVY 181 VINVFHHIKQVR+QK + PM++DQ+YI LK+QVIKAERR+LKELGFCVHVKHPHKLIV+Y Sbjct: 144 VINVFHHIKQVRSQKPLLPMILDQHYINLKSQVIKAERRVLKELGFCVHVKHPHKLIVMY 203 Query: 182 LQLLQYEKNRQLMQMAWNYMNDALR 256 L+ L+ EK++ +MQMAWN+MND+ R Sbjct: 204 LKYLELEKHQNMMQMAWNFMNDSFR 228 Score = 112 bits (269), Expect = 1e-26 Identities = 50/78 (64%), Positives = 62/78 (79%) Frame = +1 Query: 253 KTDVFMRFPPETIACACIYLTARKIGLPLPNNPHWFLLFKVTEDDIREVSMRILQLYKRA 432 +TDVF+R+ PETIACACIYLTARK +PLPNNP WF++F+V+EDD+ +V RI+ LYKR Sbjct: 228 RTDVFVRYQPETIACACIYLTARKHNIPLPNNPPWFVIFRVSEDDMLDVCYRIMALYKRG 287 Query: 433 KVNPEELETKVENLRKIY 486 K N E LE VE L+K Y Sbjct: 288 KPNAELLEEAVEALKKKY 305 >CR954256-2|CAJ14143.1| 295|Anopheles gambiae cyclin protein. Length = 295 Score = 32.7 bits (71), Expect = 0.011 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = +2 Query: 2 VINVFHHIKQVRAQKTI-SPMLVDQNYIELKNQVIKAERRILKE 130 VINVFHHIKQVR+Q + + Y+ LK + R+ K+ Sbjct: 144 VINVFHHIKQVRSQNFVGKTQSYSKLYLLLKATLSAQSFRVQKK 187 >AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. Length = 1187 Score = 31.5 bits (68), Expect = 0.025 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 4/78 (5%) Frame = +1 Query: 385 DIREVSMRILQL-YKRAKVNPEELETKVENLRKIYIANKHSQ---E*KIKKLRTKKRNPK 552 ++ + R+ Q +++ K EEL K+E L+K + + +Q K+K L+ K + K Sbjct: 723 ELNNLKQRLAQTSFQQTKEEIEELNKKIETLQKTIVEARETQTQCSAKVKDLQAKIADGK 782 Query: 553 SPTASTSKDTRRDTKKEK 606 K D K+ K Sbjct: 783 GHRERELKSAEEDLKRSK 800 >AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox protein protein. Length = 338 Score = 23.4 bits (48), Expect = 6.5 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = +1 Query: 415 QLYKRAKVNPEELETKVENLRKIYIANK 498 +LY+ V+P +L K + RK+Y K Sbjct: 106 KLYQPTDVSPPKLSPKEDYYRKLYRGEK 133 >AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase protein. Length = 973 Score = 23.4 bits (48), Expect = 6.5 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Frame = +1 Query: 289 IACACIYLTARKIGLPLPNN-PHWFLLFKVTEDDIREVSMRILQLYKRAKVNPEELETKV 465 IA AC R+ G P P +W+ TE I + ++ R K+N + + Sbjct: 250 IANACDTSLPRRKGGPYPRRRAYWW----TTE--IAQCRSHCIEA--RRKMNRAKSSEQR 301 Query: 466 ENLRKIYIANKHSQE*KIK 522 E+LR++YI + + + KIK Sbjct: 302 EDLRRLYILARSNLKRKIK 320 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 657,283 Number of Sequences: 2352 Number of extensions: 11843 Number of successful extensions: 28 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 25 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 28 length of database: 563,979 effective HSP length: 62 effective length of database: 418,155 effective search space used: 66068490 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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