Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0496
         (670 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6B8E3 Cluster: Putative uncharacterized protein; n=1; ...    33   4.7  
UniRef50_UPI00015556CD Cluster: PREDICTED: hypothetical protein;...    33   8.2  

>UniRef50_A6B8E3 Cluster: Putative uncharacterized protein; n=1;
           Vibrio parahaemolyticus AQ3810|Rep: Putative
           uncharacterized protein - Vibrio parahaemolyticus AQ3810
          Length = 119

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 20/53 (37%), Positives = 25/53 (47%)
 Frame = -2

Query: 315 LLWVRQSAGFKHRCIASDE*TDALSLGHDDFKTDFYNHSVRRGYTTQLDSKNQ 157
           L W R + G+  +C A  +  D L+L  DD  TD Y     R    Q D KNQ
Sbjct: 39  LYWARGARGWSMKCTAERDGND-LTLTRDD-ATDLYKEQFERFQLRQADWKNQ 89


>UniRef50_UPI00015556CD Cluster: PREDICTED: hypothetical protein;
           n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
           hypothetical protein - Ornithorhynchus anatinus
          Length = 622

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 342 VLQTACCVIVVVLCIGRGDG-KWKEKDRETLRHDIELYKRMADKIEREIE 488
           +L   CCV +   C GR  G K K K +  L+   EL K   DK++ E+E
Sbjct: 184 LLLLCCCVCICKKCCGRKKGKKAKGKAQIHLKEVKELGKSYIDKVQPEVE 233


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,176,262
Number of Sequences: 1657284
Number of extensions: 10712241
Number of successful extensions: 27358
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 26415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27349
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)