BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0496 (670 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_27414| Best HMM Match : E_raikovi_mat (HMM E-Value=8.9) 32 0.37 SB_51247| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64 SB_42271| Best HMM Match : DUF229 (HMM E-Value=0) 29 3.4 >SB_27414| Best HMM Match : E_raikovi_mat (HMM E-Value=8.9) Length = 79 Score = 32.3 bits (70), Expect = 0.37 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = +2 Query: 2 QTCRRDSENSNNIRKFVNEFGYSLKLNRLKFVVRFAFLCA 121 Q + +S ++ KF+ + S KL R K V RFA LCA Sbjct: 22 QNMKTNSNMCQDVEKFITCYVVSSKLCRAKIVQRFAHLCA 61 >SB_51247| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 174 Score = 31.5 bits (68), Expect = 0.64 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = +2 Query: 2 QTCRRDSENSNNIRKFVNEFGYSLKLNRLKFVVRFAFLCA 121 Q +S ++ KF+ + S KL R K V RFA LCA Sbjct: 117 QNMETNSNMCQDVEKFITCYVVSSKLCRAKIVQRFAHLCA 156 >SB_42271| Best HMM Match : DUF229 (HMM E-Value=0) Length = 591 Score = 29.1 bits (62), Expect = 3.4 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = -1 Query: 415 FSFHFPSPRPIHKTTTITQHAVCSTLCT 332 FS+ P P P + T IT H C TL T Sbjct: 71 FSYKSPDPWPNTRNTDITLHQKCETLFT 98 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,473,095 Number of Sequences: 59808 Number of extensions: 357291 Number of successful extensions: 909 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 828 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 909 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1729817375 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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