BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0496 (670 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY341191-1|AAR13755.1| 191|Anopheles gambiae GNBP B1 protein. 25 2.2 AY341190-1|AAR13754.1| 191|Anopheles gambiae GNBP B1 protein. 25 2.2 AY341189-1|AAR13753.1| 191|Anopheles gambiae GNBP B1 protein. 25 2.2 AY341188-1|AAR13752.1| 191|Anopheles gambiae GNBP B1 protein. 25 2.2 AJ001042-1|CAA04496.1| 395|Anopheles gambiae putative gram nega... 25 2.2 AF081533-1|AAD29854.1| 395|Anopheles gambiae putative gram nega... 25 2.2 AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 25 2.9 AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2 pro... 24 5.0 AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 24 5.0 >AY341191-1|AAR13755.1| 191|Anopheles gambiae GNBP B1 protein. Length = 191 Score = 25.0 bits (52), Expect = 2.2 Identities = 9/31 (29%), Positives = 16/31 (51%) Frame = -3 Query: 344 YIVYHCLKISYYGCVNLRDSNTVASQVTNER 252 Y HC ++YGCV + + + + V + R Sbjct: 116 YPTDHCTNDAFYGCVRVGNRQHIVNPVKSAR 146 >AY341190-1|AAR13754.1| 191|Anopheles gambiae GNBP B1 protein. Length = 191 Score = 25.0 bits (52), Expect = 2.2 Identities = 9/31 (29%), Positives = 16/31 (51%) Frame = -3 Query: 344 YIVYHCLKISYYGCVNLRDSNTVASQVTNER 252 Y HC ++YGCV + + + + V + R Sbjct: 116 YPTDHCTNDAFYGCVRVGNRQHIVNPVKSAR 146 >AY341189-1|AAR13753.1| 191|Anopheles gambiae GNBP B1 protein. Length = 191 Score = 25.0 bits (52), Expect = 2.2 Identities = 9/31 (29%), Positives = 16/31 (51%) Frame = -3 Query: 344 YIVYHCLKISYYGCVNLRDSNTVASQVTNER 252 Y HC ++YGCV + + + + V + R Sbjct: 116 YPTDHCTNDAFYGCVRVGNRQHIVNPVKSAR 146 >AY341188-1|AAR13752.1| 191|Anopheles gambiae GNBP B1 protein. Length = 191 Score = 25.0 bits (52), Expect = 2.2 Identities = 9/31 (29%), Positives = 16/31 (51%) Frame = -3 Query: 344 YIVYHCLKISYYGCVNLRDSNTVASQVTNER 252 Y HC ++YGCV + + + + V + R Sbjct: 116 YPTDHCTNDAFYGCVRVGNRQHIVNPVKSAR 146 >AJ001042-1|CAA04496.1| 395|Anopheles gambiae putative gram negative bacteria bindingprotein protein. Length = 395 Score = 25.0 bits (52), Expect = 2.2 Identities = 9/31 (29%), Positives = 16/31 (51%) Frame = -3 Query: 344 YIVYHCLKISYYGCVNLRDSNTVASQVTNER 252 Y HC ++YGCV + + + + V + R Sbjct: 134 YPTDHCTNDAFYGCVRVGNRQHIVNPVKSAR 164 >AF081533-1|AAD29854.1| 395|Anopheles gambiae putative gram negative bacteria bindingprotein protein. Length = 395 Score = 25.0 bits (52), Expect = 2.2 Identities = 9/31 (29%), Positives = 16/31 (51%) Frame = -3 Query: 344 YIVYHCLKISYYGCVNLRDSNTVASQVTNER 252 Y HC ++YGCV + + + + V + R Sbjct: 134 YPTDHCTNDAFYGCVRVGNRQHIVNPVKSAR 164 >AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein protein. Length = 1077 Score = 24.6 bits (51), Expect = 2.9 Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = -1 Query: 652 ISTVVNGISDILEINIEFIQ*WTFL-PLKTF 563 I T+VNG +I INI I T L LKTF Sbjct: 8 IRTIVNGSCNIASININTISSATKLEALKTF 38 >AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2 protein. Length = 755 Score = 23.8 bits (49), Expect = 5.0 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = -1 Query: 418 SFSFHFPSPRPIHKT 374 S+ + FPS RP +KT Sbjct: 20 SYEYEFPSSRPFNKT 34 >AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein. Length = 2051 Score = 23.8 bits (49), Expect = 5.0 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = -1 Query: 418 SFSFHFPSPRPIHKT 374 S+ + FPS RP +KT Sbjct: 20 SYEYEFPSSRPFNKT 34 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 628,884 Number of Sequences: 2352 Number of extensions: 11327 Number of successful extensions: 21 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 21 length of database: 563,979 effective HSP length: 62 effective length of database: 418,155 effective search space used: 66904800 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -