BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0496 (670 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 1.1 AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 23 2.0 AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 23 2.0 AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 4.6 >AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. Length = 1946 Score = 24.2 bits (50), Expect = 1.1 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = +3 Query: 363 VIVVVLCIGRGDGKWKEKD 419 V V+V+C+ RG G +KD Sbjct: 1600 VAVIVICVLRGKGHGSDKD 1618 >AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. Length = 349 Score = 23.4 bits (48), Expect = 2.0 Identities = 9/27 (33%), Positives = 14/27 (51%) Frame = -3 Query: 329 CLKISYYGCVNLRDSNTVASQVTNERT 249 C+ YG N+RD N +++ T T Sbjct: 310 CMNPIVYGAFNIRDRNKTSARPTTIET 336 >AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor protein. Length = 501 Score = 23.4 bits (48), Expect = 2.0 Identities = 13/42 (30%), Positives = 21/42 (50%) Frame = -1 Query: 391 RPIHKTTTITQHAVCSTLCTIVSKYLIMGASICGIQTPLHRK 266 +P+ ++T T + ST TIV +L S C + H+K Sbjct: 320 KPVLSSSTTTTSPMTSTKSTIVRNHL---NSTCSVTNSPHQK 358 >AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor protein. Length = 1770 Score = 22.2 bits (45), Expect = 4.6 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = +3 Query: 420 RETLRHDIELYKRMADKIEREIETFYDE 503 R T +HD LY +ERE+ + E Sbjct: 597 RLTSKHDNSLYDEYIPFLERELRKAHQE 624 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 169,904 Number of Sequences: 438 Number of extensions: 3995 Number of successful extensions: 8 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 20221290 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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