Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0495
(667 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 105 7e-22
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 105 7e-22
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 98 1e-19
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 85 1e-15
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 83 4e-15
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 82 1e-14
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 81 2e-14
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 80 4e-14
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 80 4e-14
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 78 2e-13
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 77 3e-13
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 74 3e-12
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 74 3e-12
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 73 5e-12
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 73 5e-12
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 73 6e-12
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 72 1e-11
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 71 2e-11
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 71 3e-11
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 70 4e-11
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 68 2e-10
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 66 5e-10
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 65 2e-09
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 62 9e-09
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 62 1e-08
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 62 1e-08
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 62 1e-08
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 62 1e-08
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 61 2e-08
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 61 3e-08
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 60 6e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 8e-08
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 57 3e-07
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 57 3e-07
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 57 4e-07
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 56 8e-07
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 54 4e-06
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 51 2e-05
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 51 2e-05
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 48 2e-04
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 48 3e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 47 4e-04
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 46 0.001
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 45 0.001
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 43 0.006
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 41 0.031
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 41 0.031
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 40 0.041
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 40 0.041
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 40 0.054
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 39 0.094
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 39 0.12
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 39 0.12
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 38 0.16
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 37 0.50
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 37 0.50
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 37 0.50
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 36 1.2
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 35 1.5
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 35 2.0
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 34 2.7
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 34 2.7
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 34 3.5
UniRef50_A2Q7J2 Cluster: Contig An01c0050, complete genome; n=1;... 34 3.5
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 33 4.7
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 33 4.7
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 33 4.7
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 33 4.7
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 33 6.2
UniRef50_A0DKE3 Cluster: Chromosome undetermined scaffold_54, wh... 33 6.2
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 33 8.2
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 33 8.2
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 105 bits (253), Expect = 7e-22
Identities = 64/141 (45%), Positives = 66/141 (46%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P N+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 92 PRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 151
Query: 423 ISSXXXXXXXXXXXXXXXXXXXSFDQLPFLYEL*GXXXXXXXXXXXXXXXXXXXX*QIET 602
ISS SFDQ+P G
Sbjct: 152 ISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRN 211
Query: 603 *IHHFFDPAGGGDPILYQHLF 665
FFDPAGGGDPILYQHLF
Sbjct: 212 LNTSFFDPAGGGDPILYQHLF 232
Score = 83.0 bits (196), Expect = 6e-15
Identities = 47/96 (48%), Positives = 50/96 (52%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 180
DIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 11 DIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPI 70
Query: 181 XXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPPPL 288
N LVPL+LGAPD+AFPR+ F PP L
Sbjct: 71 MIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSL 106
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/38 (71%), Positives = 28/38 (73%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LFV AVGITAF AGAIT+LLTDRNLNTSFF
Sbjct: 180 LFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFF 217
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 105 bits (253), Expect = 7e-22
Identities = 64/141 (45%), Positives = 66/141 (46%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P N+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 68 PRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 127
Query: 423 ISSXXXXXXXXXXXXXXXXXXXSFDQLPFLYEL*GXXXXXXXXXXXXXXXXXXXX*QIET 602
ISS SFDQ+P G
Sbjct: 128 ISSILGAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRN 187
Query: 603 *IHHFFDPAGGGDPILYQHLF 665
FFDPAGGGDPILYQHLF
Sbjct: 188 LNTSFFDPAGGGDPILYQHLF 208
Score = 75.8 bits (178), Expect = 9e-13
Identities = 39/70 (55%), Positives = 43/70 (61%)
Frame = +1
Query: 79 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIKI 258
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 259 *DFDSYPPPL 288
F PP L
Sbjct: 73 MSFWLLPPSL 82
Score = 49.2 bits (112), Expect = 9e-05
Identities = 25/38 (65%), Positives = 27/38 (71%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LF+ AVGITA AGAIT+LLTDRNLNTSFF
Sbjct: 156 LFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFF 193
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 98.3 bits (234), Expect = 1e-19
Identities = 53/93 (56%), Positives = 60/93 (64%)
Frame = -3
Query: 287 KGGG*ESKSYIFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 108
K GG +FIRGNA+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 107 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 9
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 76.6 bits (180), Expect = 5e-13
Identities = 36/63 (57%), Positives = 43/63 (68%)
Frame = -1
Query: 430 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLIFL 251
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QNL+
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLF 137
Query: 250 FVG 242
G
Sbjct: 138 IRG 140
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = -2
Query: 618 KNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHT 511
K +VFKFRSV +IVIAPA TGS++N+K AV T T
Sbjct: 15 KKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQT 50
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 85.0 bits (201), Expect = 1e-15
Identities = 59/144 (40%), Positives = 66/144 (45%), Gaps = 3/144 (2%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P N+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAG
Sbjct: 96 PRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAG 155
Query: 423 ISSXXXXXXXXXXXXXXXXXXXSFDQLP-FLYE--L*GXXXXXXXXXXXXXXXXXXXX*Q 593
ISS S Q P F++ +
Sbjct: 156 ISSILGAINFITTAINMKPPAISQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRN 215
Query: 594 IET*IHHFFDPAGGGDPILYQHLF 665
+ T FFDPAGGGDPILYQHLF
Sbjct: 216 LNT---TFFDPAGGGDPILYQHLF 236
Score = 77.0 bits (181), Expect = 4e-13
Identities = 42/94 (44%), Positives = 48/94 (51%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 180
DIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 15 DIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPI 74
Query: 181 XXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPP 282
N LVPL++GAPD+AFPR+ F PP
Sbjct: 75 MIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPP 108
Score = 38.7 bits (86), Expect = 0.12
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LFV +V ITA A IT+LLTDRNLNT+FF
Sbjct: 184 LFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFF 221
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 83.4 bits (197), Expect = 4e-15
Identities = 53/121 (43%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
Frame = +3
Query: 312 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 491
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S +
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMT 96
Query: 492 FDQLP-FLY--EL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQHL 662
++P F++ E+ I T FFDPAGGGDPILYQHL
Sbjct: 97 PXRMPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINT---SFFDPAGGGDPILYQHL 153
Query: 663 F 665
F
Sbjct: 154 F 154
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/38 (63%), Positives = 26/38 (68%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LFV AV ITA AGAIT+LLTDRN+NTSFF
Sbjct: 102 LFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFF 139
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 82.2 bits (194), Expect = 1e-14
Identities = 51/118 (43%), Positives = 54/118 (45%)
Frame = +3
Query: 312 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 491
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS S
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTIS 177
Query: 492 FDQLPFLYEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQHLF 665
Q P FFDPAGGGDPILYQHLF
Sbjct: 178 QYQTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLF 235
Score = 74.5 bits (175), Expect = 2e-12
Identities = 41/94 (43%), Positives = 47/94 (50%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 180
DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 14 DIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPI 73
Query: 181 XXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPP 282
N LVPL++GAPD+AFPR+ F PP
Sbjct: 74 LIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPP 107
Score = 39.5 bits (88), Expect = 0.071
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LFV AV +TA A IT+LLTDRNLNT+FF
Sbjct: 183 LFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFF 220
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 81.4 bits (192), Expect = 2e-14
Identities = 55/144 (38%), Positives = 65/144 (45%), Gaps = 3/144 (2%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P NI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG
Sbjct: 96 PRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAG 155
Query: 423 ISSXXXXXXXXXXXXXXXXXXXSFDQLP-FLYE--L*GXXXXXXXXXXXXXXXXXXXX*Q 593
+SS + ++P F++ +
Sbjct: 156 LSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAILLLLSLPVLAGAITMLLTDRY 215
Query: 594 IET*IHHFFDPAGGGDPILYQHLF 665
T FFDPAGGGDPILYQHLF
Sbjct: 216 FNT---TFFDPAGGGDPILYQHLF 236
Score = 70.1 bits (164), Expect = 4e-11
Identities = 37/97 (38%), Positives = 47/97 (48%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 180
DIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 15 DIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPT 74
Query: 181 XXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPPPLY 291
N VPL++GAPD+AFPR+ F PP L+
Sbjct: 75 MIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALF 111
Score = 38.3 bits (85), Expect = 0.16
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LFV +V ITA AGAIT+LLTDR NT+FF
Sbjct: 184 LFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFF 221
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 80.2 bits (189), Expect = 4e-14
Identities = 53/141 (37%), Positives = 58/141 (41%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P NI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 423 ISSXXXXXXXXXXXXXXXXXXXSFDQLPFLYEL*GXXXXXXXXXXXXXXXXXXXX*QIET 602
ISS + +LP
Sbjct: 155 ISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRN 214
Query: 603 *IHHFFDPAGGGDPILYQHLF 665
F+DPAGGGDPILYQHLF
Sbjct: 215 FNTSFYDPAGGGDPILYQHLF 235
Score = 59.7 bits (138), Expect = 6e-08
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 174
DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 12 DIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVM 71
Query: 175 XXXXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPPPL 288
N LVP+++GAPD+AFPR+ F PP L
Sbjct: 72 PAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
Score = 42.3 bits (95), Expect = 0.010
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LFV A+ +TA AGAIT+LLTDRN NTSF+
Sbjct: 183 LFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFY 220
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 80.2 bits (189), Expect = 4e-14
Identities = 53/141 (37%), Positives = 58/141 (41%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P NI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 423 ISSXXXXXXXXXXXXXXXXXXXSFDQLPFLYEL*GXXXXXXXXXXXXXXXXXXXX*QIET 602
ISS + +LP
Sbjct: 155 ISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRN 214
Query: 603 *IHHFFDPAGGGDPILYQHLF 665
F+DPAGGGDPILYQHLF
Sbjct: 215 FNTSFYDPAGGGDPILYQHLF 235
Score = 59.7 bits (138), Expect = 6e-08
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 174
DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 12 DIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVM 71
Query: 175 XXXXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPPPL 288
N LVP+++GAPD+AFPR+ F PP L
Sbjct: 72 PAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
Score = 42.3 bits (95), Expect = 0.010
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LFV A+ +TA AGAIT+LLTDRN NTSF+
Sbjct: 183 LFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFY 220
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 77.8 bits (183), Expect = 2e-13
Identities = 51/141 (36%), Positives = 59/141 (41%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P NI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G
Sbjct: 98 PRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSG 157
Query: 423 ISSXXXXXXXXXXXXXXXXXXXSFDQLPFLYEL*GXXXXXXXXXXXXXXXXXXXX*QIET 602
+SS + +LP
Sbjct: 158 VSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRN 217
Query: 603 *IHHFFDPAGGGDPILYQHLF 665
FFDPAGGGDPILYQHLF
Sbjct: 218 FNTTFFDPAGGGDPILYQHLF 238
Score = 58.0 bits (134), Expect = 2e-07
Identities = 34/98 (34%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXX 174
DIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 15 DIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVM 74
Query: 175 XXXXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPPPL 288
N VP+++GAPD+AFPR+ F PP L
Sbjct: 75 PAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSL 112
Score = 43.6 bits (98), Expect = 0.004
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LFV +V +TAF AGAIT+LLTDRN NT+FF
Sbjct: 186 LFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFF 223
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 77.4 bits (182), Expect = 3e-13
Identities = 50/119 (42%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Frame = +3
Query: 312 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 491
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS +
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAIT 177
Query: 492 FDQLP-FLYEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQHLF 665
Q P F++ + F DPAGGGDPILYQHLF
Sbjct: 178 QYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFF-DPAGGGDPILYQHLF 235
Score = 74.5 bits (175), Expect = 2e-12
Identities = 41/94 (43%), Positives = 47/94 (50%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 180
DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 14 DIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPV 73
Query: 181 XXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPP 282
N LVPL++GAPD+AFPR+ F PP
Sbjct: 74 MIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPP 107
Score = 38.3 bits (85), Expect = 0.16
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LFV +V +TA A IT+LLTDRNLNT+FF
Sbjct: 183 LFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFF 220
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 74.1 bits (174), Expect = 3e-12
Identities = 40/94 (42%), Positives = 47/94 (50%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 180
DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 3 DIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPI 62
Query: 181 XXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPP 282
N L+PL++GAPD+AFPR+ F PP
Sbjct: 63 MIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPP 96
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +3
Query: 312 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
+E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS
Sbjct: 107 IEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISS 146
Score = 39.9 bits (89), Expect = 0.054
Identities = 22/38 (57%), Positives = 24/38 (63%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LFV AV ITA A IT+LLTDRNLNT+FF
Sbjct: 172 LFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFF 209
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 74.1 bits (174), Expect = 3e-12
Identities = 41/96 (42%), Positives = 48/96 (50%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 180
DIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 14 DIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPI 73
Query: 181 XXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPPPL 288
N LVPL++GAPD+AFPR+ F PP L
Sbjct: 74 MIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSL 109
Score = 66.1 bits (154), Expect = 7e-10
Identities = 33/63 (52%), Positives = 38/63 (60%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P N+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAG 154
Query: 423 ISS 431
+SS
Sbjct: 155 VSS 157
Score = 43.6 bits (98), Expect = 0.004
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 615 FFDPAGGGDPILYQHLF 665
FFDPAGGGDPILYQHLF
Sbjct: 219 FFDPAGGGDPILYQHLF 235
Score = 38.7 bits (86), Expect = 0.12
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LFV +V ITA A IT+LLTDRNLNT+FF
Sbjct: 183 LFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFF 220
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 73.3 bits (172), Expect = 5e-12
Identities = 51/143 (35%), Positives = 65/143 (45%), Gaps = 2/143 (1%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P NI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 423 ISSXXXXXXXXXXXXXXXXXXXSFDQLP-FLYEL*GXXXXXXXXXXXXXXXXXXXX*QIE 599
ISS + +LP F++ + ++
Sbjct: 156 ISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSI--FITAFLLLLSLPVLSAGITMLLLD 213
Query: 600 T*IH-HFFDPAGGGDPILYQHLF 665
+ FF+ +GGGDPILY+HLF
Sbjct: 214 RNFNTSFFEVSGGGDPILYEHLF 236
Score = 43.6 bits (98), Expect = 0.004
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 174
DI LY EL PGS L G+ Q++N +V HA
Sbjct: 13 DIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVM 72
Query: 175 XXXXXXXXN*LVPLILGAPDIAFPRI 252
N L+PL++GA D AFPRI
Sbjct: 73 PALIGGFGNYLLPLMIGATDTAFPRI 98
Score = 37.5 bits (83), Expect = 0.29
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LFV ++ ITAF + IT+LL DRN NTSFF
Sbjct: 184 LFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFF 221
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 73.3 bits (172), Expect = 5e-12
Identities = 51/143 (35%), Positives = 65/143 (45%), Gaps = 2/143 (1%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P NI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 423 ISSXXXXXXXXXXXXXXXXXXXSFDQLP-FLYEL*GXXXXXXXXXXXXXXXXXXXX*QIE 599
ISS + +LP F++ + ++
Sbjct: 156 ISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSI--FITAFLLLLSLPVLSAGITMLLLD 213
Query: 600 T*IH-HFFDPAGGGDPILYQHLF 665
+ FF+ +GGGDPILY+HLF
Sbjct: 214 RNFNTSFFEVSGGGDPILYEHLF 236
Score = 43.6 bits (98), Expect = 0.004
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 174
DI LY EL PGS L G+ Q++N +V HA
Sbjct: 13 DIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVM 72
Query: 175 XXXXXXXXN*LVPLILGAPDIAFPRI 252
N L+PL++GA D AFPRI
Sbjct: 73 PALIGGFGNYLLPLMIGATDTAFPRI 98
Score = 37.5 bits (83), Expect = 0.29
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LFV ++ ITAF + IT+LL DRN NTSFF
Sbjct: 184 LFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFF 221
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 72.9 bits (171), Expect = 6e-12
Identities = 47/119 (39%), Positives = 52/119 (43%)
Frame = +3
Query: 309 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 488
+VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 489 SFDQLPFLYEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQHLF 665
S ++P FF+ AGGGDPI YQH F
Sbjct: 178 SMHKMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAF 236
Score = 41.9 bits (94), Expect = 0.013
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 79 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
EL PGS L G+ Q++N +V HA N ++PL++GA D++FPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRI 98
Score = 38.7 bits (86), Expect = 0.12
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LFV A+ ITAF + IT+LL DRN NTSFF
Sbjct: 184 LFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFF 221
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 71.7 bits (168), Expect = 1e-11
Identities = 49/141 (34%), Positives = 58/141 (41%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P NI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 96 PRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTS 155
Query: 423 ISSXXXXXXXXXXXXXXXXXXXSFDQLPFLYEL*GXXXXXXXXXXXXXXXXXXXX*QIET 602
ISS + +LP
Sbjct: 156 ISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRN 215
Query: 603 *IHHFFDPAGGGDPILYQHLF 665
FF+ AGGGDPILY+HLF
Sbjct: 216 FNTSFFEVAGGGDPILYEHLF 236
Score = 41.5 bits (93), Expect = 0.018
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 174
DI LY EL PG L G++Q++N +V HA
Sbjct: 13 DIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVM 72
Query: 175 XXXXXXXXN*LVPLILGAPDIAFPRI 252
N ++PL++GA D AFPRI
Sbjct: 73 PALIGGFGNYMLPLMIGATDTAFPRI 98
Score = 35.1 bits (77), Expect = 1.5
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LFV A+ ITA + +T+LL DRN NTSFF
Sbjct: 184 LFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFF 221
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 71.3 bits (167), Expect = 2e-11
Identities = 49/141 (34%), Positives = 57/141 (40%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P NI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH++G
Sbjct: 103 PRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISG 162
Query: 423 ISSXXXXXXXXXXXXXXXXXXXSFDQLPFLYEL*GXXXXXXXXXXXXXXXXXXXX*QIET 602
SS S ++P
Sbjct: 163 ASSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRN 222
Query: 603 *IHHFFDPAGGGDPILYQHLF 665
FFD +GGGDPILYQHLF
Sbjct: 223 FNTSFFDASGGGDPILYQHLF 243
Score = 58.4 bits (135), Expect = 1e-07
Identities = 34/98 (34%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 174
DIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 20 DIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVM 79
Query: 175 XXXXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPPPL 288
N LVP+++G+PD+AFPR+ F PP L
Sbjct: 80 PVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSL 117
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LFV ++ +TAF AGAIT+LLTDRN NTSFF
Sbjct: 191 LFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFF 228
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 70.5 bits (165), Expect = 3e-11
Identities = 47/141 (33%), Positives = 54/141 (38%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P N+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG
Sbjct: 79 PRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAG 138
Query: 423 ISSXXXXXXXXXXXXXXXXXXXSFDQLPFLYEL*GXXXXXXXXXXXXXXXXXXXX*QIET 602
SS + D++
Sbjct: 139 ASSIMGAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRN 198
Query: 603 *IHHFFDPAGGGDPILYQHLF 665
FFDP+GGGDPILYQHLF
Sbjct: 199 MNTSFFDPSGGGDPILYQHLF 219
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +1
Query: 79 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRM 81
Score = 41.5 bits (93), Expect = 0.018
Identities = 22/38 (57%), Positives = 25/38 (65%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LF +V ITA AGAIT+LLTDRN+NTSFF
Sbjct: 167 LFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFF 204
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 70.1 bits (164), Expect = 4e-11
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = +3
Query: 312 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 101 VESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSS 140
Score = 69.7 bits (163), Expect = 6e-11
Identities = 35/70 (50%), Positives = 41/70 (58%)
Frame = +1
Query: 79 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIKI 258
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 259 *DFDSYPPPL 288
F PP L
Sbjct: 83 MSFWFLPPSL 92
Score = 43.6 bits (98), Expect = 0.004
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LFV +V ITA AGAIT+LLTDRN NTSFF
Sbjct: 166 LFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFF 203
Score = 43.6 bits (98), Expect = 0.004
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 615 FFDPAGGGDPILYQHLF 665
FFDPAGGGDPILYQHLF
Sbjct: 202 FFDPAGGGDPILYQHLF 218
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 67.7 bits (158), Expect = 2e-10
Identities = 33/72 (45%), Positives = 41/72 (56%)
Frame = +1
Query: 79 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIKI 258
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 259 *DFDSYPPPLYY 294
F +P +Y
Sbjct: 84 MSFGFFPLHWHY 95
Score = 33.1 bits (72), Expect = 6.2
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 378 GRSVDLAIFSLHLAGISS 431
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 66.5 bits (155), Expect = 5e-10
Identities = 36/69 (52%), Positives = 42/69 (60%)
Frame = +1
Query: 76 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIK 255
AELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AFPR+
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 256 I*DFDSYPP 282
F PP
Sbjct: 100 NMSFWLLPP 108
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/63 (55%), Positives = 37/63 (58%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P NI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 423 ISS 431
ISS
Sbjct: 155 ISS 157
Score = 59.7 bits (138), Expect = 6e-08
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 174
DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 12 DIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVM 71
Query: 175 XXXXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPPPL 288
N LVP+++GAPD+AFPR+ F PP L
Sbjct: 72 PAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 62.5 bits (145), Expect = 9e-09
Identities = 49/145 (33%), Positives = 58/145 (40%), Gaps = 4/145 (2%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSL 410
P NI F I+E G GTG T+ YPPLS +H G SVDLAIF+L
Sbjct: 124 PRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFAL 183
Query: 411 HLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPFLYEL*GXXXXXXXXXXXXXXXXXXXX* 590
HL+G+SS +L L G
Sbjct: 184 HLSGVSSLLGSINFITTVANMRTPGIKLHKL----ALFGWATWSSRSRYFLGITMVLTDR 239
Query: 591 QIET*IHHFFDPAGGGDPILYQHLF 665
T FF+ AGGGDPIL+QHLF
Sbjct: 240 NFNT---SFFEVAGGGDPILFQHLF 261
Score = 58.4 bits (135), Expect = 1e-07
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXX 177
DIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 42 DIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMP 101
Query: 178 XXXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPPPL 288
N L+PL++G PD+AFPR+ F PP L
Sbjct: 102 ALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSL 138
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 62.1 bits (144), Expect = 1e-08
Identities = 38/141 (26%), Positives = 57/141 (40%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P N+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 423 ISSXXXXXXXXXXXXXXXXXXXSFDQLPFLYEL*GXXXXXXXXXXXXXXXXXXXX*QIET 602
+SS + +LP
Sbjct: 173 LSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRN 232
Query: 603 *IHHFFDPAGGGDPILYQHLF 665
FF +GGGDP+LY+H+F
Sbjct: 233 FNTSFFVVSGGGDPLLYEHIF 253
Score = 41.1 bits (92), Expect = 0.023
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 88 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRI 115
Score = 35.1 bits (77), Expect = 1.5
Identities = 19/38 (50%), Positives = 22/38 (57%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LFV +V ITA A +T+LL DRN NTSFF
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFF 238
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 62.1 bits (144), Expect = 1e-08
Identities = 38/141 (26%), Positives = 57/141 (40%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P N+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 423 ISSXXXXXXXXXXXXXXXXXXXSFDQLPFLYEL*GXXXXXXXXXXXXXXXXXXXX*QIET 602
+SS + +LP
Sbjct: 173 LSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRN 232
Query: 603 *IHHFFDPAGGGDPILYQHLF 665
FF +GGGDP+LY+H+F
Sbjct: 233 FNTSFFVVSGGGDPLLYEHIF 253
Score = 41.1 bits (92), Expect = 0.023
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 88 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRI 115
Score = 35.1 bits (77), Expect = 1.5
Identities = 19/38 (50%), Positives = 22/38 (57%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LFV +V ITA A +T+LL DRN NTSFF
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFF 238
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 62.1 bits (144), Expect = 1e-08
Identities = 38/141 (26%), Positives = 57/141 (40%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P N+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 423 ISSXXXXXXXXXXXXXXXXXXXSFDQLPFLYEL*GXXXXXXXXXXXXXXXXXXXX*QIET 602
+SS + +LP
Sbjct: 173 LSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRN 232
Query: 603 *IHHFFDPAGGGDPILYQHLF 665
FF +GGGDP+LY+H+F
Sbjct: 233 FNTSFFVVSGGGDPLLYEHIF 253
Score = 41.1 bits (92), Expect = 0.023
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 88 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRI 115
Score = 35.1 bits (77), Expect = 1.5
Identities = 19/38 (50%), Positives = 22/38 (57%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LFV +V ITA A +T+LL DRN NTSFF
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFF 238
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 62.1 bits (144), Expect = 1e-08
Identities = 38/141 (26%), Positives = 57/141 (40%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P N+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 423 ISSXXXXXXXXXXXXXXXXXXXSFDQLPFLYEL*GXXXXXXXXXXXXXXXXXXXX*QIET 602
+SS + +LP
Sbjct: 173 LSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRN 232
Query: 603 *IHHFFDPAGGGDPILYQHLF 665
FF +GGGDP+LY+H+F
Sbjct: 233 FNTSFFVVSGGGDPLLYEHIF 253
Score = 41.1 bits (92), Expect = 0.023
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 88 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRI 115
Score = 35.1 bits (77), Expect = 1.5
Identities = 19/38 (50%), Positives = 22/38 (57%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LFV +V ITA A +T+LL DRN NTSFF
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFF 238
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 61.3 bits (142), Expect = 2e-08
Identities = 44/137 (32%), Positives = 54/137 (39%)
Frame = +3
Query: 255 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 434
NI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 105 NISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSL 164
Query: 435 XXXXXXXXXXXXXXXXXXSFDQLPFLYEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHH 614
++ +P
Sbjct: 165 LGAINFITTFINMRTIGMKYENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTS 224
Query: 615 FFDPAGGGDPILYQHLF 665
FF+ AGGGD +LYQHLF
Sbjct: 225 FFEYAGGGDAVLYQHLF 241
Score = 43.2 bits (97), Expect = 0.006
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 174
DI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 18 DIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVM 77
Query: 175 XXXXXXXXN*LVPLILGAPDIAFPRI 252
N L+PL+LGA D+AF R+
Sbjct: 78 PALVGGFGNYLMPLMLGASDMAFARL 103
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 60.9 bits (141), Expect = 3e-08
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +3
Query: 312 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
+ENG GTG T+YPPLS +H G SVDLAIF LHL+GISS
Sbjct: 119 IENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISS 158
Score = 51.6 bits (118), Expect = 2e-05
Identities = 30/85 (35%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXX 177
DIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 14 DIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMP 73
Query: 178 XXXXXXXN*LVPLILGAPDIAFPRI 252
N L+PL LG PD+ FPR+
Sbjct: 74 ALIGGFGNFLLPLGLGGPDMGFPRL 98
Score = 39.5 bits (88), Expect = 0.071
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LF AV ITA AG IT++LTDRN NTSFF
Sbjct: 184 LFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFF 221
Score = 38.3 bits (85), Expect = 0.16
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 615 FFDPAGGGDPILYQHLF 665
FF+ AGGGDPILYQHLF
Sbjct: 220 FFEVAGGGDPILYQHLF 236
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 59.7 bits (138), Expect = 6e-08
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 174
DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 12 DIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVM 71
Query: 175 XXXXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPPPL 288
N LVP+++GAPD+AFPR+ F PP L
Sbjct: 72 PAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 8e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +3
Query: 309 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 57.2 bits (132), Expect = 3e-07
Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXX 174
DIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 16 DIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVM 75
Query: 175 XXXXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPPPL 288
N VP+++G+PD+AFPR+ F PP L
Sbjct: 76 PAMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSL 113
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 57.2 bits (132), Expect = 3e-07
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = +3
Query: 309 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
I+ENG GTG T+YPPLS +H VDL IF LHL+GISS
Sbjct: 144 IIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISS 184
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 79 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
EL PG I D+Q+YN+I+T+H N L+P+++G PD+AFPR+
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRL 124
Score = 39.1 bits (87), Expect = 0.094
Identities = 22/38 (57%), Positives = 24/38 (63%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LF AV ITA A AIT+LLTDRNLNTSF+
Sbjct: 210 LFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFY 247
Score = 33.5 bits (73), Expect = 4.7
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 615 FFDPAGGGDPILYQHLF 665
F++ AGGGD ILYQHLF
Sbjct: 246 FYELAGGGDAILYQHLF 262
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 56.8 bits (131), Expect = 4e-07
Identities = 29/55 (52%), Positives = 32/55 (58%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 407
P N+ F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 11 PRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 37.9 bits (84), Expect = 0.22
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +1
Query: 511 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 618
CM C +Y TCFS S+Y IIN K KY IF
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIF 132
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 56.0 bits (129), Expect = 8e-07
Identities = 27/39 (69%), Positives = 28/39 (71%)
Frame = +3
Query: 315 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
E G GTG TVYPPLSS +H G SVDL IFS HL GI S
Sbjct: 123 EGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGS 161
Score = 40.7 bits (91), Expect = 0.031
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +1
Query: 79 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
EL PG L G+ YN I T H N VP+++GAPD++FPR+
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRL 101
Score = 39.1 bits (87), Expect = 0.094
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LFV +V +T+F A AIT+LL DRN NTSF+
Sbjct: 187 LFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFY 224
Score = 36.7 bits (81), Expect = 0.50
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 615 FFDPAGGGDPILYQHLF 665
F+DP GGGD +LYQHLF
Sbjct: 223 FYDPVGGGDVVLYQHLF 239
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 53.6 bits (123), Expect = 4e-06
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Frame = +3
Query: 309 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 488
+++ GAG G T YPP+S+ R+VD AIF++H++G SS
Sbjct: 223 MIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGM 282
Query: 489 SFDQLP-FLYEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQHLF 665
+ ++P F + + F DPAGGGDPIL+QH+F
Sbjct: 283 TLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFF-DPAGGGDPILFQHIF 341
Score = 37.9 bits (84), Expect = 0.22
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LF +V +TA+ AGAIT+LLTDRN T+FF
Sbjct: 289 LFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFF 326
Score = 37.5 bits (83), Expect = 0.29
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +1
Query: 76 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 249
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 250 I 252
+
Sbjct: 203 L 203
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 51.2 bits (117), Expect = 2e-05
Identities = 39/117 (33%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Frame = +3
Query: 318 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 497
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS +
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLH 222
Query: 498 QLP-FLYEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQHLF 665
++P F++ + + D AGGGDP LYQHLF
Sbjct: 223 KMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFY-DAAGGGDPELYQHLF 278
Score = 37.5 bits (83), Expect = 0.29
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LFV +V +TAF A AIT+LLTDRN T+F+
Sbjct: 226 LFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFY 263
Score = 36.3 bits (80), Expect = 0.66
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 118 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
++N ++TAH N VP+++GAPD+AFPR+
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRM 137
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 51.2 bits (117), Expect = 2e-05
Identities = 39/117 (33%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Frame = +3
Query: 321 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 500
G G G T+YPPLS++ G +DLA+FSLH+AG+SS F
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMS 182
Query: 501 L-PFL-YEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQHLF 665
L P L + L G ++ P GGGDPIL+QHLF
Sbjct: 183 LNPMLIWTLFGTSILLVTSVPVLAAGLTLLLLDRHFSTSFYY-PEGGGDPILWQHLF 238
Score = 35.5 bits (78), Expect = 1.2
Identities = 20/84 (23%), Positives = 33/84 (39%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 180
DIGT+Y EL +PG + +Y++I+T HA
Sbjct: 16 DIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPT 75
Query: 181 XXXXXXN*LVPLILGAPDIAFPRI 252
N +PL++ D++ PR+
Sbjct: 76 SIGGLGNWFIPLMIKIKDLSMPRL 99
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +3
Query: 321 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +3
Query: 351 PLSSNIAHRGRSVDLAIFSLHLAGISS 431
PL+S+IAH G SVD+AIFSLHLAG+SS
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSS 98
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +1
Query: 514 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 618
M C +YS +TC WSYYN IN SKLKYI+F
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILF 118
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 79 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
EL +PG G Q+YN+++T H N ++PL+LGAP++AFPR+
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRV 108
Query: 253 KI*DF 267
F
Sbjct: 109 NALSF 113
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 45.2 bits (102), Expect = 0.001
Identities = 28/94 (29%), Positives = 39/94 (41%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 180
DIG LY EL +PG + + YN+++T+H
Sbjct: 96 DIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFATPI 155
Query: 181 XXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPP 282
N L+PL++GA D+AFPRI F PP
Sbjct: 156 IAAFS-NYLIPLLIGADDMAFPRINAIAFWLLPP 188
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 43.2 bits (97), Expect = 0.006
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 174
DI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 18 DIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVM 77
Query: 175 XXXXXXXXN*LVPLILGAPDIAFPRI 252
N L+PL+LGA D+AF R+
Sbjct: 78 PALVGGFGNYLMPLMLGASDMAFARL 103
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 40.7 bits (91), Expect = 0.031
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +1
Query: 79 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIKI 258
EL PG I D YN + T H N L+P+++GA D+AFP++ +
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNL 122
Query: 259 *DFDSY 276
F Y
Sbjct: 123 LSFYVY 128
Score = 34.3 bits (75), Expect = 2.7
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +3
Query: 618 FDPAGGGDPILYQHLF 665
FDPA GGDP+L+QH F
Sbjct: 239 FDPARGGDPVLFQHFF 254
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 40.7 bits (91), Expect = 0.031
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +3
Query: 312 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 40.3 bits (90), Expect = 0.041
Identities = 21/60 (35%), Positives = 27/60 (45%)
Frame = +1
Query: 79 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIKI 258
EL PG I D YN T H N ++PL+LGA D+AFPR+ +
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLNL 129
Score = 35.9 bits (79), Expect = 0.88
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 618 FDPAGGGDPILYQHLF 665
FDPA GGDP+L+QHLF
Sbjct: 246 FDPARGGDPVLFQHLF 261
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 40.3 bits (90), Expect = 0.041
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +1
Query: 79 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
EL PG+ L G+ Q++N +V HA N L+PL++GA D++F R+
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 253 KI*DFDSYPPPL 288
F PP L
Sbjct: 99 NNISFWLLPPAL 110
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 39.9 bits (89), Expect = 0.054
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +1
Query: 94 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIKI*DFDS 273
G L GD Q YN ++T+H N +P++ G PD+ FPR+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWM 107
Query: 274 Y 276
Y
Sbjct: 108 Y 108
Score = 37.1 bits (82), Expect = 0.38
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P N+ F + E G G G T+YP L H + D +F++HL G
Sbjct: 98 PRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLG 157
Query: 423 ISS 431
ISS
Sbjct: 158 ISS 160
Score = 35.9 bits (79), Expect = 0.88
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 619
LF+ A ITA AG +T++L DRN NTSF+
Sbjct: 186 LFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFY 223
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 39.1 bits (87), Expect = 0.094
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +3
Query: 321 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
Score = 39.1 bits (87), Expect = 0.094
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = +3
Query: 615 FFDPAGGGDPILYQHLF 665
FF+P+GGGDPIL+QHLF
Sbjct: 309 FFEPSGGGDPILFQHLF 325
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 38.7 bits (86), Expect = 0.12
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 91 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
PG + D + YN ++T H N L+PL++GA D+AFPR+
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRL 55
Score = 33.5 bits (73), Expect = 4.7
Identities = 11/18 (61%), Positives = 17/18 (94%)
Frame = +3
Query: 612 HFFDPAGGGDPILYQHLF 665
+FF+PA GGDP++YQ++F
Sbjct: 174 NFFNPAKGGDPLIYQNIF 191
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 38.7 bits (86), Expect = 0.12
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 615 FFDPAGGGDPILYQHLF 665
FFDPAGGGD IL+QHLF
Sbjct: 196 FFDPAGGGDXILFQHLF 212
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 38.3 bits (85), Expect = 0.16
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 615 FFDPAGGGDPILYQHLF 665
FF+P GGGDP++YQHLF
Sbjct: 230 FFNPVGGGDPVVYQHLF 246
Score = 33.5 bits (73), Expect = 4.7
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = +1
Query: 79 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIKI 258
EL P ++YN ++T H N L+PL++G D+AFPR+
Sbjct: 55 ELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNA 113
Query: 259 *DFDSYPP 282
F PP
Sbjct: 114 VAFWLTPP 121
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 36.7 bits (81), Expect = 0.50
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 79 ELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
EL G I DD +YNT + H N +PL++GA D+AFPR+
Sbjct: 42 ELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRV 100
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 36.7 bits (81), Expect = 0.50
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 324 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
Score = 33.1 bits (72), Expect = 6.2
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 615 FFDPAGGGDPILYQHLF 665
F+D GGDP+LYQHLF
Sbjct: 203 FYDATMGGDPLLYQHLF 219
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 36.7 bits (81), Expect = 0.50
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +3
Query: 315 ENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISS 431
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 124 EFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVAS 163
Score = 35.9 bits (79), Expect = 0.88
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 615 FFDPAGGGDPILYQHLF 665
FFDP GDPILYQHLF
Sbjct: 225 FFDPTFAGDPILYQHLF 241
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 35.5 bits (78), Expect = 1.2
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 615 FFDPAGGGDPILYQHLF 665
FFDP GGDP+L+QHLF
Sbjct: 261 FFDPERGGDPLLWQHLF 277
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 35.1 bits (77), Expect = 1.5
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 612 HFFDPAGGGDPILYQHLF 665
HFF+PA GGD +L+QHLF
Sbjct: 234 HFFNPAEGGDVLLWQHLF 251
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 34.7 bits (76), Expect = 2.0
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 615 FFDPAGGGDPILYQHLF 665
FF P GGGDP+L+QH F
Sbjct: 245 FFRPEGGGDPVLFQHFF 261
Score = 33.9 bits (74), Expect = 3.5
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +1
Query: 79 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
EL P + + D +YN + T H N L+P ++GAPD+AFP++
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKL 120
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 34.3 bits (75), Expect = 2.7
Identities = 20/53 (37%), Positives = 25/53 (47%)
Frame = +2
Query: 254 KYKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 412
++KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 83 QFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 34.3 bits (75), Expect = 2.7
Identities = 24/94 (25%), Positives = 33/94 (35%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 180
DIG LY EL + +YN ++T+H
Sbjct: 70 DIGILYGVYGTIAFAWGGVSVLLMRTELATSSETLISPSLYNGLLTSHGITMLFLFGTPM 129
Query: 181 XXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPP 282
N +PL++ A D+AFPRI F PP
Sbjct: 130 IAAFG-NYFIPLLIDADDMAFPRINAIAFWLLPP 162
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 33.9 bits (74), Expect = 3.5
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 612 HFFDPAGGGDPILYQHLF 665
HFFD A GG P+L+QHLF
Sbjct: 254 HFFDVAHGGRPLLWQHLF 271
>UniRef50_A2Q7J2 Cluster: Contig An01c0050, complete genome; n=1;
Aspergillus niger|Rep: Contig An01c0050, complete genome
- Aspergillus niger
Length = 937
Score = 33.9 bits (74), Expect = 3.5
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = -2
Query: 636 LLQQDQKNDVFKFR--SVNNIVIAPAKTGSDNNNKNAVIPTAHTKRVIDQM 490
LL+QD +N++F+F + NN ++ P + D +NA + + ++D +
Sbjct: 26 LLKQDMENEIFRFNLWAANNFILTPGRASMDWRLRNAPLLQSTMAELLDDL 76
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 33.5 bits (73), Expect = 4.7
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 330 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 431
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 33.5 bits (73), Expect = 4.7
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 615 FFDPAGGGDPILYQHLF 665
FF+PA GGDPI Y HLF
Sbjct: 221 FFNPAVGGDPIAYAHLF 237
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 33.5 bits (73), Expect = 4.7
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +1
Query: 76 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
AEL PG ++ +N + T H N ++PL +GAPD+AFPR+
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRL 122
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 33.5 bits (73), Expect = 4.7
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +1
Query: 79 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
+L P + + YN I+T H N +VPL+LGA D+A PR+
Sbjct: 52 QLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRV 109
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 33.1 bits (72), Expect = 6.2
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 115 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIKI 258
+ Y +VT HA N L+PL++GA D+AFP + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNM 133
>UniRef50_A0DKE3 Cluster: Chromosome undetermined scaffold_54, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_54,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 424
Score = 33.1 bits (72), Expect = 6.2
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -2
Query: 642 GLLLQQDQKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTKRVI 499
G+ L+ +N++ R+VNN +I KT +N+N +I K I
Sbjct: 321 GVTLKDTNQNEILTERNVNNKIIKKNKTSPNNSNNKCIICCEKPKNAI 368
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 32.7 bits (71), Expect = 8.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 324 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSS 190
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 32.7 bits (71), Expect = 8.2
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 3 YWNIIFYFWYLIRNNWNIFKTFNS 74
YWNI+F+FWYLI ++ K NS
Sbjct: 348 YWNIMFHFWYLISFISHLAKINNS 371
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 507,278,312
Number of Sequences: 1657284
Number of extensions: 8120858
Number of successful extensions: 18094
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 17189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18040
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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