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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0494
         (656 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0386 + 33555682-33556344,33557138-33557299                      149   2e-36
07_01_0756 + 5819367-5820038,5820847-5821005                          144   4e-35
07_03_0099 + 13387533-13387641,13387647-13387864,13388497-13388871     64   9e-11
03_04_0238 - 19219040-19219218,19220296-19220350,19221606-192216...    47   2e-05
02_02_0591 - 11901947-11901984,11902394-11903786,11903846-11904031     29   2.5  
11_04_0439 + 17749634-17749858,17750164-17750301,17750770-177509...    29   3.3  
02_04_0238 + 21186072-21186883,21187315-21189346                       29   3.3  
04_03_1049 + 22015053-22015083,22015770-22015885,22016013-220161...    28   5.7  
05_03_0076 + 8164466-8164511,8164643-8164698,8165529-8165867,816...    28   7.5  

>03_06_0386 + 33555682-33556344,33557138-33557299
          Length = 274

 Score =  149 bits (361), Expect = 2e-36
 Identities = 70/82 (85%), Positives = 75/82 (91%), Gaps = 1/82 (1%)
 Frame = +1

Query: 274 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 453
           L P L DEV+KI PVQKQTRAGQRTRFKAFV +GDNNGH+GLGVKC+KEVATAIRGAIIL
Sbjct: 81  LVPGLKDEVMKITPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCAKEVATAIRGAIIL 140

Query: 454 AKLSVLPVRRGYWGNKIGS-HT 516
           AKLSV+PVRRGYWGNKIG  HT
Sbjct: 141 AKLSVVPVRRGYWGNKIGQPHT 162



 Score = 88.2 bits (209), Expect = 5e-18
 Identities = 37/50 (74%), Positives = 46/50 (92%)
 Frame = +3

Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRCTGIVSAPVPKKLLQMAGVQDCYTS 656
           +PHTVPCKVTGKCGSVTVR++PAPR +GIV+A VPKK+LQ AG++D +TS
Sbjct: 159 QPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIEDVFTS 208



 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 23/37 (62%), Positives = 33/37 (89%)
 Frame = +2

Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253
           ++++++WVPVTKLGRLV+EG+  K+E IYL SLP+KE
Sbjct: 38  RQEEEKWVPVTKLGRLVKEGRFSKIEEIYLHSLPVKE 74


>07_01_0756 + 5819367-5820038,5820847-5821005
          Length = 276

 Score =  144 bits (350), Expect = 4e-35
 Identities = 68/82 (82%), Positives = 74/82 (90%), Gaps = 1/82 (1%)
 Frame = +1

Query: 274 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 453
           L P L DEV+KI PVQKQTRAGQRTRFKAFV +GD +GH+GLGVKC+KEVATAIRGAIIL
Sbjct: 84  LVPGLKDEVMKITPVQKQTRAGQRTRFKAFVVVGDGDGHVGLGVKCAKEVATAIRGAIIL 143

Query: 454 AKLSVLPVRRGYWGNKIGS-HT 516
           AKLSV+PVRRGYWGNKIG  HT
Sbjct: 144 AKLSVVPVRRGYWGNKIGKPHT 165



 Score = 89.8 bits (213), Expect = 2e-18
 Identities = 38/50 (76%), Positives = 46/50 (92%)
 Frame = +3

Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRCTGIVSAPVPKKLLQMAGVQDCYTS 656
           KPHTVPCKVTGKCGSVTVR++PAPR +GIV+A VPKK+LQ AG++D +TS
Sbjct: 162 KPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAAHVPKKVLQFAGIEDVFTS 211



 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 24/37 (64%), Positives = 33/37 (89%)
 Frame = +2

Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253
           ++++++WVPVTKLGRLV+E KI K+E IYL SLP+KE
Sbjct: 41  RQEEEKWVPVTKLGRLVKENKIHKIEEIYLHSLPVKE 77


>07_03_0099 + 13387533-13387641,13387647-13387864,13388497-13388871
          Length = 233

 Score = 64.1 bits (149), Expect = 9e-11
 Identities = 28/51 (54%), Positives = 38/51 (74%)
 Frame = +3

Query: 504 RKPHTVPCKVTGKCGSVTVRLIPAPRCTGIVSAPVPKKLLQMAGVQDCYTS 656
           RKPHTV CKV  K GSVTVR++  P  + +V+  VPKK+L+ AG++D +TS
Sbjct: 46  RKPHTVSCKVADKYGSVTVRMMLPPMGSSVVATRVPKKVLKFAGIEDVFTS 96



 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 20/32 (62%), Positives = 24/32 (75%)
 Frame = +1

Query: 361 FVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 456
           FV +GD + HI LGVKC+K  AT + GAIILA
Sbjct: 2   FVVVGDGDSHIELGVKCAK--ATTMSGAIILA 31


>03_04_0238 -
           19219040-19219218,19220296-19220350,19221606-19221690,
           19222068-19222798
          Length = 349

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 21/63 (33%), Positives = 39/63 (61%)
 Frame = +1

Query: 289 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 468
           ++ V+++  V K  + G++  F+A V +GD  GH+G+GV  +KEV  AI  A +  + ++
Sbjct: 171 SERVVQVNRVTKVVKGGRQLSFRAIVVVGDMKGHVGVGVGKAKEVTEAITKAAMNGRRNL 230

Query: 469 LPV 477
           + V
Sbjct: 231 VTV 233


>02_02_0591 - 11901947-11901984,11902394-11903786,11903846-11904031
          Length = 538

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -1

Query: 638 YTSHLKKLLRNWRRHNTSTTRGRNQPDCYGTTLAGDLA 525
           Y  ++++L+++W  H+    R  + PD  G  +  DLA
Sbjct: 410 YPINVERLIQHWMAHDFIPAREEDNPDMVGKEIFNDLA 447


>11_04_0439 +
           17749634-17749858,17750164-17750301,17750770-17750943,
           17751099-17751184,17751264-17751525,17751616-17751815,
           17753631-17754086,17754198-17754474,17754694-17754828,
           17754946-17755026,17756305-17756400,17756676-17756771,
           17756844-17756900,17756975-17757043,17757158-17757237,
           17758185-17758329,17758422-17758511,17758914-17758994,
           17759103-17759198,17759279-17759335,17759417-17759461,
           17759547-17759612,17760304-17760350,17762771-17762865,
           17763375-17763393,17763438-17763498,17763637-17763660
          Length = 1085

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 423 DFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHD 307
           +F+A LHT  +M   V      +E C LS    F+ +HD
Sbjct: 655 EFIAYLHTYVDMLHKVDEIGDTMEDCYLSSPIKFVSKHD 693


>02_04_0238 + 21186072-21186883,21187315-21189346
          Length = 947

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 20/57 (35%), Positives = 28/57 (49%)
 Frame = +2

Query: 146 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKESRSLISSSARP*MMRFLRSCL 316
           E Q + VP+   G L   GK      +Y     I ESR+ ++ S +P MM+ LR  L
Sbjct: 189 EQQLKVVPIVGSGGL---GKTTLANQVYHNLEGIFESRAFVTVSQKPDMMKILREIL 242


>04_03_1049 + 22015053-22015083,22015770-22015885,22016013-22016108,
            22016229-22016285,22016468-22016620,22016754-22016838,
            22017097-22017187,22017324-22017488,22017813-22017932,
            22018020-22018104,22018234-22018402,22019055-22019173,
            22019250-22019440,22019746-22019957,22020905-22021500,
            22022538-22022658,22023439-22023868,22024412-22024797,
            22024976-22025071,22025380-22025432,22026915-22027061,
            22027139-22027309,22027880-22027962,22028049-22028247,
            22028668-22028789,22029752-22029818,22029960-22030010,
            22030768-22031001,22031263-22031451,22032455-22032646,
            22032742-22032936
          Length = 1673

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 98   DRHGLYLHRVIRIRRENRHVHRLEQRPP 15
            D HGL+    + +    RH+HR+E +PP
Sbjct: 1006 DMHGLHASEAVEVLE--RHLHRIEFQPP 1031


>05_03_0076 + 8164466-8164511,8164643-8164698,8165529-8165867,
            8165938-8166012,8166674-8166846,8168697-8168795,
            8169002-8169161,8169321-8169464,8169551-8169723,
            8169796-8169991,8170061-8170258,8170864-8171016,
            8171838-8171959,8172037-8172136,8172221-8172316,
            8172400-8172530,8173717-8173819,8174373-8174555,
            8174632-8174724,8174818-8174853,8175672-8175773,
            8176310-8176472,8176557-8176678,8176994-8177158,
            8177667-8177849,8178679-8178831,8179136-8179288,
            8179373-8179444,8179530-8179664,8179739-8179800,
            8179999-8180096,8180628-8180737,8180832-8181005,
            8181092-8181157,8181847-8181915,8181989-8182099,
            8182418-8182558,8182638-8182766,8182864-8183029,
            8183174-8183388,8184883-8185089,8185501-8185572,
            8185897-8186010,8186090-8186281,8186489-8186569,
            8186654-8186728,8186812-8186878,8187292-8187452,
            8187943-8188116,8188209-8188337,8188421-8188504,
            8188589-8188650,8188728-8188800,8189008-8189142,
            8189790-8189960,8190054-8190319,8190440-8190458
          Length = 2448

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
 Frame = -1

Query: 275  RKKSMISIL*LVKKTSKCSR---VCRFFLREQDGRVW*QEPTLSGLPCRAHDHGRDHDRV 105
            R+++++++  L+     C     +C    R  D     ++     L C AH  G D    
Sbjct: 1006 RRRAIVTLTKLIPTVQLCITRLLICLSVARNNDDL---RKDAAEALCCLAHALGEDFTIF 1062

Query: 104  HEDRHGLYLHRVIRIRRENRHVHRLEQRPPLLND 3
                H L +   +R R+ +   +RL +R PL+++
Sbjct: 1063 VSSIHKLLVKHHMRYRKWDEIENRLLRREPLISE 1096


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,346,430
Number of Sequences: 37544
Number of extensions: 410221
Number of successful extensions: 1199
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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