BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0494 (656 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_06_0386 + 33555682-33556344,33557138-33557299 149 2e-36 07_01_0756 + 5819367-5820038,5820847-5821005 144 4e-35 07_03_0099 + 13387533-13387641,13387647-13387864,13388497-13388871 64 9e-11 03_04_0238 - 19219040-19219218,19220296-19220350,19221606-192216... 47 2e-05 02_02_0591 - 11901947-11901984,11902394-11903786,11903846-11904031 29 2.5 11_04_0439 + 17749634-17749858,17750164-17750301,17750770-177509... 29 3.3 02_04_0238 + 21186072-21186883,21187315-21189346 29 3.3 04_03_1049 + 22015053-22015083,22015770-22015885,22016013-220161... 28 5.7 05_03_0076 + 8164466-8164511,8164643-8164698,8165529-8165867,816... 28 7.5 >03_06_0386 + 33555682-33556344,33557138-33557299 Length = 274 Score = 149 bits (361), Expect = 2e-36 Identities = 70/82 (85%), Positives = 75/82 (91%), Gaps = 1/82 (1%) Frame = +1 Query: 274 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 453 L P L DEV+KI PVQKQTRAGQRTRFKAFV +GDNNGH+GLGVKC+KEVATAIRGAIIL Sbjct: 81 LVPGLKDEVMKITPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCAKEVATAIRGAIIL 140 Query: 454 AKLSVLPVRRGYWGNKIGS-HT 516 AKLSV+PVRRGYWGNKIG HT Sbjct: 141 AKLSVVPVRRGYWGNKIGQPHT 162 Score = 88.2 bits (209), Expect = 5e-18 Identities = 37/50 (74%), Positives = 46/50 (92%) Frame = +3 Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRCTGIVSAPVPKKLLQMAGVQDCYTS 656 +PHTVPCKVTGKCGSVTVR++PAPR +GIV+A VPKK+LQ AG++D +TS Sbjct: 159 QPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIEDVFTS 208 Score = 59.7 bits (138), Expect = 2e-09 Identities = 23/37 (62%), Positives = 33/37 (89%) Frame = +2 Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253 ++++++WVPVTKLGRLV+EG+ K+E IYL SLP+KE Sbjct: 38 RQEEEKWVPVTKLGRLVKEGRFSKIEEIYLHSLPVKE 74 >07_01_0756 + 5819367-5820038,5820847-5821005 Length = 276 Score = 144 bits (350), Expect = 4e-35 Identities = 68/82 (82%), Positives = 74/82 (90%), Gaps = 1/82 (1%) Frame = +1 Query: 274 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 453 L P L DEV+KI PVQKQTRAGQRTRFKAFV +GD +GH+GLGVKC+KEVATAIRGAIIL Sbjct: 84 LVPGLKDEVMKITPVQKQTRAGQRTRFKAFVVVGDGDGHVGLGVKCAKEVATAIRGAIIL 143 Query: 454 AKLSVLPVRRGYWGNKIGS-HT 516 AKLSV+PVRRGYWGNKIG HT Sbjct: 144 AKLSVVPVRRGYWGNKIGKPHT 165 Score = 89.8 bits (213), Expect = 2e-18 Identities = 38/50 (76%), Positives = 46/50 (92%) Frame = +3 Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRCTGIVSAPVPKKLLQMAGVQDCYTS 656 KPHTVPCKVTGKCGSVTVR++PAPR +GIV+A VPKK+LQ AG++D +TS Sbjct: 162 KPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAAHVPKKVLQFAGIEDVFTS 211 Score = 59.7 bits (138), Expect = 2e-09 Identities = 24/37 (64%), Positives = 33/37 (89%) Frame = +2 Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253 ++++++WVPVTKLGRLV+E KI K+E IYL SLP+KE Sbjct: 41 RQEEEKWVPVTKLGRLVKENKIHKIEEIYLHSLPVKE 77 >07_03_0099 + 13387533-13387641,13387647-13387864,13388497-13388871 Length = 233 Score = 64.1 bits (149), Expect = 9e-11 Identities = 28/51 (54%), Positives = 38/51 (74%) Frame = +3 Query: 504 RKPHTVPCKVTGKCGSVTVRLIPAPRCTGIVSAPVPKKLLQMAGVQDCYTS 656 RKPHTV CKV K GSVTVR++ P + +V+ VPKK+L+ AG++D +TS Sbjct: 46 RKPHTVSCKVADKYGSVTVRMMLPPMGSSVVATRVPKKVLKFAGIEDVFTS 96 Score = 41.1 bits (92), Expect = 8e-04 Identities = 20/32 (62%), Positives = 24/32 (75%) Frame = +1 Query: 361 FVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 456 FV +GD + HI LGVKC+K AT + GAIILA Sbjct: 2 FVVVGDGDSHIELGVKCAK--ATTMSGAIILA 31 >03_04_0238 - 19219040-19219218,19220296-19220350,19221606-19221690, 19222068-19222798 Length = 349 Score = 46.8 bits (106), Expect = 2e-05 Identities = 21/63 (33%), Positives = 39/63 (61%) Frame = +1 Query: 289 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 468 ++ V+++ V K + G++ F+A V +GD GH+G+GV +KEV AI A + + ++ Sbjct: 171 SERVVQVNRVTKVVKGGRQLSFRAIVVVGDMKGHVGVGVGKAKEVTEAITKAAMNGRRNL 230 Query: 469 LPV 477 + V Sbjct: 231 VTV 233 >02_02_0591 - 11901947-11901984,11902394-11903786,11903846-11904031 Length = 538 Score = 29.5 bits (63), Expect = 2.5 Identities = 11/38 (28%), Positives = 21/38 (55%) Frame = -1 Query: 638 YTSHLKKLLRNWRRHNTSTTRGRNQPDCYGTTLAGDLA 525 Y ++++L+++W H+ R + PD G + DLA Sbjct: 410 YPINVERLIQHWMAHDFIPAREEDNPDMVGKEIFNDLA 447 >11_04_0439 + 17749634-17749858,17750164-17750301,17750770-17750943, 17751099-17751184,17751264-17751525,17751616-17751815, 17753631-17754086,17754198-17754474,17754694-17754828, 17754946-17755026,17756305-17756400,17756676-17756771, 17756844-17756900,17756975-17757043,17757158-17757237, 17758185-17758329,17758422-17758511,17758914-17758994, 17759103-17759198,17759279-17759335,17759417-17759461, 17759547-17759612,17760304-17760350,17762771-17762865, 17763375-17763393,17763438-17763498,17763637-17763660 Length = 1085 Score = 29.1 bits (62), Expect = 3.3 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = -3 Query: 423 DFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHD 307 +F+A LHT +M V +E C LS F+ +HD Sbjct: 655 EFIAYLHTYVDMLHKVDEIGDTMEDCYLSSPIKFVSKHD 693 >02_04_0238 + 21186072-21186883,21187315-21189346 Length = 947 Score = 29.1 bits (62), Expect = 3.3 Identities = 20/57 (35%), Positives = 28/57 (49%) Frame = +2 Query: 146 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKESRSLISSSARP*MMRFLRSCL 316 E Q + VP+ G L GK +Y I ESR+ ++ S +P MM+ LR L Sbjct: 189 EQQLKVVPIVGSGGL---GKTTLANQVYHNLEGIFESRAFVTVSQKPDMMKILREIL 242 >04_03_1049 + 22015053-22015083,22015770-22015885,22016013-22016108, 22016229-22016285,22016468-22016620,22016754-22016838, 22017097-22017187,22017324-22017488,22017813-22017932, 22018020-22018104,22018234-22018402,22019055-22019173, 22019250-22019440,22019746-22019957,22020905-22021500, 22022538-22022658,22023439-22023868,22024412-22024797, 22024976-22025071,22025380-22025432,22026915-22027061, 22027139-22027309,22027880-22027962,22028049-22028247, 22028668-22028789,22029752-22029818,22029960-22030010, 22030768-22031001,22031263-22031451,22032455-22032646, 22032742-22032936 Length = 1673 Score = 28.3 bits (60), Expect = 5.7 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = -1 Query: 98 DRHGLYLHRVIRIRRENRHVHRLEQRPP 15 D HGL+ + + RH+HR+E +PP Sbjct: 1006 DMHGLHASEAVEVLE--RHLHRIEFQPP 1031 >05_03_0076 + 8164466-8164511,8164643-8164698,8165529-8165867, 8165938-8166012,8166674-8166846,8168697-8168795, 8169002-8169161,8169321-8169464,8169551-8169723, 8169796-8169991,8170061-8170258,8170864-8171016, 8171838-8171959,8172037-8172136,8172221-8172316, 8172400-8172530,8173717-8173819,8174373-8174555, 8174632-8174724,8174818-8174853,8175672-8175773, 8176310-8176472,8176557-8176678,8176994-8177158, 8177667-8177849,8178679-8178831,8179136-8179288, 8179373-8179444,8179530-8179664,8179739-8179800, 8179999-8180096,8180628-8180737,8180832-8181005, 8181092-8181157,8181847-8181915,8181989-8182099, 8182418-8182558,8182638-8182766,8182864-8183029, 8183174-8183388,8184883-8185089,8185501-8185572, 8185897-8186010,8186090-8186281,8186489-8186569, 8186654-8186728,8186812-8186878,8187292-8187452, 8187943-8188116,8188209-8188337,8188421-8188504, 8188589-8188650,8188728-8188800,8189008-8189142, 8189790-8189960,8190054-8190319,8190440-8190458 Length = 2448 Score = 27.9 bits (59), Expect = 7.5 Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 3/94 (3%) Frame = -1 Query: 275 RKKSMISIL*LVKKTSKCSR---VCRFFLREQDGRVW*QEPTLSGLPCRAHDHGRDHDRV 105 R+++++++ L+ C +C R D ++ L C AH G D Sbjct: 1006 RRRAIVTLTKLIPTVQLCITRLLICLSVARNNDDL---RKDAAEALCCLAHALGEDFTIF 1062 Query: 104 HEDRHGLYLHRVIRIRRENRHVHRLEQRPPLLND 3 H L + +R R+ + +RL +R PL+++ Sbjct: 1063 VSSIHKLLVKHHMRYRKWDEIENRLLRREPLISE 1096 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,346,430 Number of Sequences: 37544 Number of extensions: 410221 Number of successful extensions: 1199 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1154 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1197 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1644004708 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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