Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0494
(656 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 171 7e-43
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 171 7e-43
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 171 7e-43
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 171 7e-43
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 171 7e-43
BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p pro... 30 2.4
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA... 30 2.4
AE014134-733|AAO41157.1| 579|Drosophila melanogaster CG33003-PA... 30 3.2
AE013599-325|AAF59274.2| 1307|Drosophila melanogaster CG11101-PA... 29 5.6
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 171 bits (416), Expect = 7e-43
Identities = 86/106 (81%), Positives = 89/106 (83%), Gaps = 1/106 (0%)
Frame = +1
Query: 202 KNRQTREHLLVFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 381
K + E L + EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 382 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGS-HT 516
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 101 bits (241), Expect = 1e-21
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRCTGIVSAPVPKKLLQMAGVQDCYTS 656
KPHTVPCKVTGKCGSV+VRLIPAPR TGIVSAPVP+KLL MAG++DCYTS
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPRKLLTMAGIEDCYTS 208
Score = 70.5 bits (165), Expect = 2e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKE
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKE 73
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 171 bits (416), Expect = 7e-43
Identities = 86/106 (81%), Positives = 89/106 (83%), Gaps = 1/106 (0%)
Frame = +1
Query: 202 KNRQTREHLLVFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 381
K + E L + EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 382 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGS-HT 516
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 102 bits (244), Expect = 5e-22
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRCTGIVSAPVPKKLLQMAGVQDCYTS 656
KPHTVPCKVTGKCGSV+VRLIPAPR TGIVSAPVPKKLL MAG++DCYTS
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTS 208
Score = 70.5 bits (165), Expect = 2e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKE
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKE 73
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 171 bits (416), Expect = 7e-43
Identities = 86/106 (81%), Positives = 89/106 (83%), Gaps = 1/106 (0%)
Frame = +1
Query: 202 KNRQTREHLLVFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 381
K + E L + EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 382 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGS-HT 516
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 102 bits (244), Expect = 5e-22
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRCTGIVSAPVPKKLLQMAGVQDCYTS 656
KPHTVPCKVTGKCGSV+VRLIPAPR TGIVSAPVPKKLL MAG++DCYTS
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTS 208
Score = 70.5 bits (165), Expect = 2e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKE
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKE 73
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 171 bits (416), Expect = 7e-43
Identities = 86/106 (81%), Positives = 89/106 (83%), Gaps = 1/106 (0%)
Frame = +1
Query: 202 KNRQTREHLLVFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 381
K + E L + EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 382 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGS-HT 516
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 102 bits (244), Expect = 5e-22
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRCTGIVSAPVPKKLLQMAGVQDCYTS 656
KPHTVPCKVTGKCGSV+VRLIPAPR TGIVSAPVPKKLL MAG++DCYTS
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTS 208
Score = 70.5 bits (165), Expect = 2e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKE
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKE 73
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 171 bits (416), Expect = 7e-43
Identities = 86/106 (81%), Positives = 89/106 (83%), Gaps = 1/106 (0%)
Frame = +1
Query: 202 KNRQTREHLLVFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 381
K + E L + EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 382 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGS-HT 516
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 102 bits (244), Expect = 5e-22
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRCTGIVSAPVPKKLLQMAGVQDCYTS 656
KPHTVPCKVTGKCGSV+VRLIPAPR TGIVSAPVPKKLL MAG++DCYTS
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTS 208
Score = 70.5 bits (165), Expect = 2e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKE
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKE 73
>BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p
protein.
Length = 823
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -1
Query: 149 LPCRAHDHGRDHDRVHEDRHGLYLHRVIRIRREN-RHVHRLEQRPPLLN 6
L C H D R+H + GL + V+ + REN VH + ++ LLN
Sbjct: 359 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 407
>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
protein.
Length = 1958
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -1
Query: 149 LPCRAHDHGRDHDRVHEDRHGLYLHRVIRIRREN-RHVHRLEQRPPLLN 6
L C H D R+H + GL + V+ + REN VH + ++ LLN
Sbjct: 325 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 373
>AE014134-733|AAO41157.1| 579|Drosophila melanogaster CG33003-PA
protein.
Length = 579
Score = 29.9 bits (64), Expect = 3.2
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 134 HDHGRDHDRVHEDRHGLY 81
HDH DHD VH+ H Y
Sbjct: 413 HDHAPDHDHVHDHHHDHY 430
>AE013599-325|AAF59274.2| 1307|Drosophila melanogaster CG11101-PA
protein.
Length = 1307
Score = 29.1 bits (62), Expect = 5.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 160 VGSCHQTRPSCSRRKNRQTREHLLVFFTNQRIEII 264
V SCH RP SRRK+R+ ++ F R++ I
Sbjct: 816 VSSCH-CRPGYSRRKHREPCRRVISFHLGMRVDRI 849
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,134,468
Number of Sequences: 53049
Number of extensions: 684906
Number of successful extensions: 4228
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3174
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -