BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0494 (656 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 171 7e-43 U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 171 7e-43 U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 171 7e-43 AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 171 7e-43 AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 171 7e-43 BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p pro... 30 2.4 AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA... 30 2.4 AE014134-733|AAO41157.1| 579|Drosophila melanogaster CG33003-PA... 30 3.2 AE013599-325|AAF59274.2| 1307|Drosophila melanogaster CG11101-PA... 29 5.6 >X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein S2 protein. Length = 267 Score = 171 bits (416), Expect = 7e-43 Identities = 86/106 (81%), Positives = 89/106 (83%), Gaps = 1/106 (0%) Frame = +1 Query: 202 KNRQTREHLLVFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 381 K + E L + EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116 Query: 382 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGS-HT 516 NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG HT Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162 Score = 101 bits (241), Expect = 1e-21 Identities = 44/50 (88%), Positives = 48/50 (96%) Frame = +3 Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRCTGIVSAPVPKKLLQMAGVQDCYTS 656 KPHTVPCKVTGKCGSV+VRLIPAPR TGIVSAPVP+KLL MAG++DCYTS Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPRKLLTMAGIEDCYTS 208 Score = 70.5 bits (165), Expect = 2e-12 Identities = 32/37 (86%), Positives = 33/37 (89%) Frame = +2 Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253 KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKE Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKE 73 >U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein S2 protein. Length = 267 Score = 171 bits (416), Expect = 7e-43 Identities = 86/106 (81%), Positives = 89/106 (83%), Gaps = 1/106 (0%) Frame = +1 Query: 202 KNRQTREHLLVFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 381 K + E L + EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116 Query: 382 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGS-HT 516 NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG HT Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162 Score = 102 bits (244), Expect = 5e-22 Identities = 45/50 (90%), Positives = 48/50 (96%) Frame = +3 Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRCTGIVSAPVPKKLLQMAGVQDCYTS 656 KPHTVPCKVTGKCGSV+VRLIPAPR TGIVSAPVPKKLL MAG++DCYTS Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTS 208 Score = 70.5 bits (165), Expect = 2e-12 Identities = 32/37 (86%), Positives = 33/37 (89%) Frame = +2 Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253 KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKE Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKE 73 >U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein S2 protein. Length = 267 Score = 171 bits (416), Expect = 7e-43 Identities = 86/106 (81%), Positives = 89/106 (83%), Gaps = 1/106 (0%) Frame = +1 Query: 202 KNRQTREHLLVFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 381 K + E L + EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116 Query: 382 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGS-HT 516 NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG HT Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162 Score = 102 bits (244), Expect = 5e-22 Identities = 45/50 (90%), Positives = 48/50 (96%) Frame = +3 Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRCTGIVSAPVPKKLLQMAGVQDCYTS 656 KPHTVPCKVTGKCGSV+VRLIPAPR TGIVSAPVPKKLL MAG++DCYTS Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTS 208 Score = 70.5 bits (165), Expect = 2e-12 Identities = 32/37 (86%), Positives = 33/37 (89%) Frame = +2 Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253 KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKE Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKE 73 >AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p protein. Length = 267 Score = 171 bits (416), Expect = 7e-43 Identities = 86/106 (81%), Positives = 89/106 (83%), Gaps = 1/106 (0%) Frame = +1 Query: 202 KNRQTREHLLVFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 381 K + E L + EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116 Query: 382 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGS-HT 516 NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG HT Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162 Score = 102 bits (244), Expect = 5e-22 Identities = 45/50 (90%), Positives = 48/50 (96%) Frame = +3 Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRCTGIVSAPVPKKLLQMAGVQDCYTS 656 KPHTVPCKVTGKCGSV+VRLIPAPR TGIVSAPVPKKLL MAG++DCYTS Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTS 208 Score = 70.5 bits (165), Expect = 2e-12 Identities = 32/37 (86%), Positives = 33/37 (89%) Frame = +2 Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253 KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKE Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKE 73 >AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA protein. Length = 267 Score = 171 bits (416), Expect = 7e-43 Identities = 86/106 (81%), Positives = 89/106 (83%), Gaps = 1/106 (0%) Frame = +1 Query: 202 KNRQTREHLLVFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 381 K + E L + EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116 Query: 382 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGS-HT 516 NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG HT Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162 Score = 102 bits (244), Expect = 5e-22 Identities = 45/50 (90%), Positives = 48/50 (96%) Frame = +3 Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRCTGIVSAPVPKKLLQMAGVQDCYTS 656 KPHTVPCKVTGKCGSV+VRLIPAPR TGIVSAPVPKKLL MAG++DCYTS Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTS 208 Score = 70.5 bits (165), Expect = 2e-12 Identities = 32/37 (86%), Positives = 33/37 (89%) Frame = +2 Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253 KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKE Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKE 73 >BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p protein. Length = 823 Score = 30.3 bits (65), Expect = 2.4 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = -1 Query: 149 LPCRAHDHGRDHDRVHEDRHGLYLHRVIRIRREN-RHVHRLEQRPPLLN 6 L C H D R+H + GL + V+ + REN VH + ++ LLN Sbjct: 359 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 407 >AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA protein. Length = 1958 Score = 30.3 bits (65), Expect = 2.4 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = -1 Query: 149 LPCRAHDHGRDHDRVHEDRHGLYLHRVIRIRREN-RHVHRLEQRPPLLN 6 L C H D R+H + GL + V+ + REN VH + ++ LLN Sbjct: 325 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 373 >AE014134-733|AAO41157.1| 579|Drosophila melanogaster CG33003-PA protein. Length = 579 Score = 29.9 bits (64), Expect = 3.2 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = -1 Query: 134 HDHGRDHDRVHEDRHGLY 81 HDH DHD VH+ H Y Sbjct: 413 HDHAPDHDHVHDHHHDHY 430 >AE013599-325|AAF59274.2| 1307|Drosophila melanogaster CG11101-PA protein. Length = 1307 Score = 29.1 bits (62), Expect = 5.6 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = +1 Query: 160 VGSCHQTRPSCSRRKNRQTREHLLVFFTNQRIEII 264 V SCH RP SRRK+R+ ++ F R++ I Sbjct: 816 VSSCH-CRPGYSRRKHREPCRRVISFHLGMRVDRI 849 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 30,134,468 Number of Sequences: 53049 Number of extensions: 684906 Number of successful extensions: 4228 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2080 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3174 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2806815600 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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