Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0493
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    24   1.4  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    24   1.4  
Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      22   5.6  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 179 CGGVRPRSIPEHFEQTNDPIV 117
           CGG     IP+H   TN  IV
Sbjct: 300 CGGECEYPIPDHMNTTNHAIV 320


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 66  KQILLRL*PKRTYLCEYNNR 125
           K +  +L PKR ++C+Y NR
Sbjct: 68  KLVAGKLKPKRQFICKYCNR 87


>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +1

Query: 154 MLRGLTPPHRVKSISMATFTPEEIEFIKSRGND 252
           ++RG+       + ++ TF  E+I+F+ S G D
Sbjct: 30  VVRGVWVSFNQTAQNVDTFVREQIDFVGSSGVD 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,537
Number of Sequences: 336
Number of extensions: 2904
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)