Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0493
(701 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0203 + 26348360-26348458,26349584-26349645,26349808-263498... 85 7e-17
03_02_0844 + 11695159-11695263,11695402-11695463,11695789-116958... 84 9e-17
01_06_1112 + 34606171-34606266,34607170-34607231,34607932-346080... 79 3e-15
07_03_0910 - 22519006-22519159,22519300-22519355,22519433-225197... 67 1e-11
03_02_0554 - 9426195-9426674,9427163-9427252,9428143-9428934 62 4e-10
10_08_1021 - 22315487-22315493,22317051-22317154,22317227-223173... 59 3e-09
02_01_0739 + 5505630-5505654,5505965-5506049,5506444-5506519,550... 56 3e-08
06_03_0723 + 23875008-23875204,23875311-23875576,23877166-238772... 56 4e-08
03_06_0726 - 35761959-35762063,35762232-35762336,35762543-357626... 53 2e-07
01_07_0189 + 41875088-41875149,41875322-41875392,41875809-418759... 53 3e-07
09_04_0694 - 19529084-19529201,19529464-19529544,19529637-195301... 47 2e-05
02_05_0042 + 25351648-25351724,25351983-25352010,25352311-253523... 42 4e-04
08_02_1409 - 26864544-26864658,26864787-26864916,26864953-268652... 42 6e-04
02_02_0015 + 6109552-6109650,6110006-6110078,6111937-6111998,611... 37 0.018
11_01_0196 - 1547373-1549859 29 2.7
07_03_0520 + 19014731-19015795 29 2.7
05_07_0002 - 26979873-26980823 29 4.7
02_02_0299 - 8726024-8726101,8726460-8726534,8726836-8726965,872... 28 6.2
06_03_0297 + 19267491-19267677,19267799-19267843,19268466-192685... 28 8.3
01_05_0380 - 21633505-21634563,21634626-21634677,21636263-216363... 28 8.3
01_01_0563 + 4142351-4144510,4145610-4147259,4147942-4148185,414... 28 8.3
>05_06_0203 +
26348360-26348458,26349584-26349645,26349808-26349895,
26349985-26350085,26350130-26350223,26350323-26350730,
26351090-26351521,26351612-26351755,26351824-26351940,
26352842-26352949
Length = 550
Score = 84.6 bits (200), Expect = 7e-17
Identities = 38/83 (45%), Positives = 56/83 (67%)
Frame = +1
Query: 4 NRRKQDDKNLEILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGLTPPHR 183
+R K++++N +R L+ L GN+ C++CN GP YV T+ +FVC CSG+ R T HR
Sbjct: 3 SRVKEEERNERAIRALLKLPGNRRCINCNSLGPQYVCTSFSTFVCVSCSGIHREFT--HR 60
Query: 184 VKSISMATFTPEEIEFIKSRGND 252
VKSISMA FT +E+ ++ GN+
Sbjct: 61 VKSISMAKFTSQEVSALQEGGNE 83
>03_02_0844 +
11695159-11695263,11695402-11695463,11695789-11695876,
11695958-11696019,11696250-11696346,11696592-11696984,
11697072-11697611,11697856-11697966,11698102-11698242,
11698290-11698394,11698480-11698557,11699346-11699472,
11699580-11699625,11699709-11699754
Length = 666
Score = 84.2 bits (199), Expect = 9e-17
Identities = 38/83 (45%), Positives = 58/83 (69%)
Frame = +1
Query: 1 ANRRKQDDKNLEILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGLTPPH 180
A RK++++N ++R L+ L N+ C++CN GP YV T+ +FVC CSG+ R T H
Sbjct: 4 AASRKEEERNERVVRGLLKLPPNRRCINCNGLGPQYVCTSFWTFVCISCSGIHREFT--H 61
Query: 181 RVKSISMATFTPEEIEFIKSRGN 249
RVKS+SM+TFT +E+E +++ GN
Sbjct: 62 RVKSVSMSTFTTQEVEALQNGGN 84
>01_06_1112 +
34606171-34606266,34607170-34607231,34607932-34608019,
34608104-34608165,34608246-34608342,34608499-34608930,
34609042-34610061,34610151-34610282,34610354-34610470,
34610982-34611062,34611321-34611447,34611547-34611592,
34611663-34611708
Length = 801
Score = 79.4 bits (187), Expect = 3e-15
Identities = 35/80 (43%), Positives = 54/80 (67%)
Frame = +1
Query: 10 RKQDDKNLEILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGLTPPHRVK 189
R+++++N +I+R L+ L N+ C++CN GP YV T +F+C CSG+ R T HRVK
Sbjct: 4 RREEERNEKIIRGLMKLPPNRKCINCNSVGPQYVCTNFWTFICLSCSGIHREFT--HRVK 61
Query: 190 SISMATFTPEEIEFIKSRGN 249
S+SMA FT +E+ ++ GN
Sbjct: 62 SVSMAKFTTQEVRSLEQGGN 81
>07_03_0910 -
22519006-22519159,22519300-22519355,22519433-22519702,
22519808-22519986,22520146-22520374,22520985-22521180,
22521728-22521818,22521921-22521975,22522812-22522902,
22523366-22523424,22524000-22524050
Length = 476
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = +1
Query: 25 KNLEILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSISM 201
K+ +IL L+ L N+ C DC +GP + + +G F+C +CSG+ R L +V+S ++
Sbjct: 14 KHKKILEGLLRLPENRECADCKSKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATL 73
Query: 202 ATFTPEEIEFIKSRGND 252
T+ PE++ FI+S GN+
Sbjct: 74 DTWLPEQVAFIQSMGNE 90
>03_02_0554 - 9426195-9426674,9427163-9427252,9428143-9428934
Length = 453
Score = 62.1 bits (144), Expect = 4e-10
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +1
Query: 40 LRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSISMATFTP 216
LREL GNK C+DC QR P + + + G F+C +CSG RGL V+S++M ++T
Sbjct: 9 LRELQGQAGNKTCVDCAQRNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWTE 68
Query: 217 EEIEFIKSRGNDYVDLF 267
++ +++ GND ++ F
Sbjct: 69 AQLRKMEAGGNDRLNAF 85
>10_08_1021 -
22315487-22315493,22317051-22317154,22317227-22317328,
22317623-22317745,22318038-22318094,22318498-22318758,
22318948-22319377,22320168-22320286,22320515-22320595
Length = 427
Score = 59.3 bits (137), Expect = 3e-09
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +1
Query: 22 DKNLEILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSIS 198
DKN + R+L + + NK C DCN + PT+ + T G F+C CS + R L V+S +
Sbjct: 12 DKNT-VFRKLRAKSDNKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVRSTN 70
Query: 199 MATFTPEEIEFIKSRGNDYVDLF 267
+ ++TPE+++ + GN+ F
Sbjct: 71 LDSWTPEQLKMMVYGGNNRAQAF 93
>02_01_0739 +
5505630-5505654,5505965-5506049,5506444-5506519,
5506694-5506857,5506878-5506935,5507283-5507399,
5507543-5507638,5507905-5508186
Length = 300
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = +1
Query: 10 RKQDDKNLEILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRV 186
R+ D + L+EL+ + N+ C DC+ P + + IG F+C KCSG+ R L T +V
Sbjct: 4 RRDDSAKMAKLKELLHRSENRICADCSAPDPKWASANIGVFICLKCSGVHRSLGTHISKV 63
Query: 187 KSISMATFTPEEIE-FIKSRGNDYVD 261
S+++ ++ EI+ I+ GN + +
Sbjct: 64 LSVTLDQWSDNEIDNVIEVGGNSHAN 89
>06_03_0723 + 23875008-23875204,23875311-23875576,23877166-23877274,
23877577-23878212,23878328-23878573,23878669-23878834,
23878863-23879076,23879580-23880097,23880617-23880683,
23882131-23882215,23882292-23882367,23882593-23882756,
23883088-23883217,23883314-23883430,23883505-23883600,
23883732-23884009,23886571-23886794,23886935-23887011,
23887103-23887145,23887231-23887288,23888371-23888410,
23888891-23889418
Length = 1444
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Frame = +1
Query: 40 LRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSISMATFTP 216
L+EL+ + N+ C DC+ P + + IG F+C KCSG+ R L T +V S+++ +T
Sbjct: 812 LKELLHKSENRICADCSSPDPKWASANIGVFICLKCSGIHRSLGTHISKVLSVTLDEWTD 871
Query: 217 EEI-EFIKSRGNDYVD 261
+EI ++ GN Y +
Sbjct: 872 DEINSMLEVGGNSYAN 887
>03_06_0726 -
35761959-35762063,35762232-35762336,35762543-35762665,
35763056-35763316,35763449-35763905,35764637-35764755,
35764851-35764919
Length = 412
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 22 DKNLEILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSIS 198
DKN + R L + NK C DC+ + PT+ + T G F+C CS + R L V+S +
Sbjct: 8 DKNA-VFRRLKAKPENKMCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVRSTN 66
Query: 199 MATFTPEEIEFIKSRGNDYVDLF 267
+ ++TP++++ + GN+ F
Sbjct: 67 LDSWTPDQLKMMAFGGNNRAHAF 89
>01_07_0189 +
41875088-41875149,41875322-41875392,41875809-41875902,
41876285-41876360,41877130-41877293,41877428-41877605,
41877687-41877809,41877895-41877990,41878091-41878372
Length = 381
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 34 EILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSISMATF 210
E L L++ NK C DC P +V+ T G F+C KCSG R L +V S+ + +
Sbjct: 51 ERLEHLLNQPANKICADCGAPDPKWVSLTFGVFICIKCSGAHRSLGVHISKVVSVKLDEW 110
Query: 211 TPEEIEFIKSRGND 252
T E+++ + G +
Sbjct: 111 TDEQVDILADSGGN 124
>09_04_0694 -
19529084-19529201,19529464-19529544,19529637-19530136,
19530444-19530540,19530633-19530775,19531187-19531528,
19531810-19532031,19532292-19532330,19532386-19532601,
19533101-19533196,19533416-19533481,19533777-19533821,
19533903-19533965,19534274-19534344,19534599-19534699,
19534896-19534972,19535856-19535900
Length = 773
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Frame = +1
Query: 22 DKNLEILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSIS 198
DK +++LR+++ GN C DC P + + +G +C +CSG+ R L +V+S++
Sbjct: 410 DKPIDLLRKVV---GNNICADCGAAEPDWASLNLGILLCIECSGVHRNLGVHISKVRSLT 466
Query: 199 M--ATFTPEEIEFIKSRGNDYVD 261
+ + P I +S GN + +
Sbjct: 467 LDVRVWEPSVINLFQSLGNTFAN 489
>02_05_0042 +
25351648-25351724,25351983-25352010,25352311-25352373,
25352880-25352945,25353029-25353076,25353338-25353379,
25353499-25353714,25354066-25354188,25354352-25354564,
25354930-25355016,25355259-25355507,25356386-25356507,
25357135-25357225,25358467-25358882,25359489-25359609
Length = 653
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = +1
Query: 13 KQDDKNLEILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVK 189
K + + +I L ++ GN C +C P + + +G +C +CSG R L +V+
Sbjct: 347 KSPEGHDDIFNHLRNIPGNDSCAECRSPDPDWASLNLGILICIECSGAHRNLGVHISKVR 406
Query: 190 S--ISMATFTPEEIEFIKSRGNDYVD 261
S + + + P ++ GNDY +
Sbjct: 407 SLRLDVKVWEPVIMDLFHELGNDYTN 432
>08_02_1409 -
26864544-26864658,26864787-26864916,26864953-26865283,
26866507-26866626,26867489-26867821,26867915-26868001,
26868093-26868320,26868434-26868565,26868649-26868861,
26869376-26869417,26869829-26869894,26870230-26870274,
26870367-26870429,26870757-26870827,26871149-26871249,
26871458-26871534,26872415-26872459
Length = 732
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +1
Query: 22 DKNLEILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGLTPPHRVKSISM 201
+K +++LR++ +GN C+DC P + + +G+ +C +CSG+ R L H K IS
Sbjct: 450 EKPIDLLRKV---DGNIICVDCGSMEPDWASLNLGALLCIECSGVHRNL-GVHISKLIST 505
Query: 202 ATF 210
F
Sbjct: 506 TLF 508
>02_02_0015 +
6109552-6109650,6110006-6110078,6111937-6111998,
6112315-6112376,6112463-6112556,6112673-6113227,
6113379-6113870,6113967-6114137,6115713-6115817,
6115903-6116052,6116372-6116498,6116585-6116648,
6117147-6117203,6117423-6117555,6117660-6117746
Length = 776
Score = 36.7 bits (81), Expect = 0.018
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1
Query: 1 ANRRKQDDKNLEILRELISLNGNKYCLDCN 90
A+R K+D++N I+R L+ L NK C++CN
Sbjct: 2 ASRLKEDERNERIIRGLLKLPANKRCINCN 31
>11_01_0196 - 1547373-1549859
Length = 828
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 670 YRRCDCSSWSRNCERTCRIKEGLP 599
+ R D S WSR C T RI+ G P
Sbjct: 320 HERVDASDWSRGCRPTFRIECGRP 343
>07_03_0520 + 19014731-19015795
Length = 354
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 55 SLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGLTPPHRVKSISMAT 207
S +G +YC C + ++ G +C++C+ +L P R S AT
Sbjct: 4 SPDGVRYCQQCERTTSMVLDHDTGDAICTECAIVLGNGNDPRRPAVASAAT 54
>05_07_0002 - 26979873-26980823
Length = 316
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +1
Query: 61 NGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGML 159
N YC DC + ++ T G +C++C+ +L
Sbjct: 7 NDGAYCPDCRRATAVVLDHTTGDTICTECALVL 39
>02_02_0299 -
8726024-8726101,8726460-8726534,8726836-8726965,
8727406-8727601,8727894-8727965,8728087-8728159,
8728240-8728344,8728502-8728624,8728730-8728806,
8729064-8729108,8729214-8729433
Length = 397
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 100 PTYVNTTIGSFVCSKCSGMLRGLTPPHRVKSISMATFTPEEIEFIKS 240
PTY + IG +C+K + LTP + ++ + A +I F S
Sbjct: 300 PTYPSGVIGFLLCAKEGPPVNFLTPANPIEKLEGAMEAGRDIRFYNS 346
>06_03_0297 +
19267491-19267677,19267799-19267843,19268466-19268542,
19268652-19268774,19269029-19269133,19269217-19269289,
19269588-19269690,19269890-19270144,19270996-19271125,
19271278-19271352,19271470-19271550
Length = 417
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 100 PTYVNTTIGSFVCSKCSGMLRGLTPPHRVKSISMATFTPEEIEFIKS 240
PTY + IG +C+K + L+P + ++ + A EI F S
Sbjct: 319 PTYPSGVIGFLLCAKEGPAVNFLSPVNPIEKLEGAMEAGREIRFYNS 365
>01_05_0380 -
21633505-21634563,21634626-21634677,21636263-21636310,
21636349-21637289,21638737-21638982
Length = 781
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 417 YKSKAKAGNVAASVTPLISISPQSSKNASNKMQFKLRN 530
Y +K +AG V TPL+++SP S A +K K N
Sbjct: 182 YSTKERAG-VQEESTPLVALSPHKSPPAVSKSPTKCYN 218
>01_01_0563 +
4142351-4144510,4145610-4147259,4147942-4148185,
4148280-4148830
Length = 1534
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 79 LDCNQRGPTYVNTTIGSFVCSKCSGMLRGLTPPHR 183
LDCN RG N T SF G L + PP +
Sbjct: 857 LDCNSRGIGGANITSRSFPDQIMDGSLSAVCPPQK 891
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,367,838
Number of Sequences: 37544
Number of extensions: 281400
Number of successful extensions: 701
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -