BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0493 (701 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z93785-1|CAB07858.1| 495|Caenorhabditis elegans Hypothetical pr... 60 2e-09 Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical pr... 48 9e-06 U23486-3|AAL38955.1| 529|Caenorhabditis elegans Hypothetical pr... 44 8e-05 AL023828-18|CAA19462.2| 742|Caenorhabditis elegans Hypothetical... 43 2e-04 AL023828-17|CAA19463.2| 826|Caenorhabditis elegans Hypothetical... 43 2e-04 AJ132699-1|CAA10735.1| 742|Caenorhabditis elegans centaurin bet... 43 2e-04 AJ132698-1|CAA10734.1| 826|Caenorhabditis elegans centaurin bet... 43 2e-04 AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical... 41 0.001 AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical... 41 0.001 AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical... 41 0.001 AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gam... 41 0.001 AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gam... 41 0.001 AF003384-2|AAL08040.1| 428|Caenorhabditis elegans Acyltransfera... 30 1.4 AF003384-1|AAK71374.2| 415|Caenorhabditis elegans Acyltransfera... 30 1.4 Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical pr... 28 5.6 Z81481-8|CAB63438.2| 343|Caenorhabditis elegans Hypothetical pr... 28 5.6 AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear recep... 28 5.6 AF332207-1|AAK17978.1| 378|Caenorhabditis elegans nuclear recep... 28 7.4 >Z93785-1|CAB07858.1| 495|Caenorhabditis elegans Hypothetical protein W09D10.1 protein. Length = 495 Score = 59.7 bits (138), Expect = 2e-09 Identities = 24/83 (28%), Positives = 52/83 (62%), Gaps = 2/83 (2%) Frame = +1 Query: 10 RKQDDKNLE-ILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHR 183 +K++ + L+ L +++ NKYC DC + P + +G F+C +C+G+ R L + Sbjct: 9 KKEEQERLQGFLLDMLKEEENKYCADCQAKTPRWAAWNLGVFICIRCAGIHRNLGVHISK 68 Query: 184 VKSISMATFTPEEIEFIKSRGND 252 V+S+++ ++TPE+++ ++ GN+ Sbjct: 69 VRSVNLDSWTPEQVQTMRVMGNE 91 >Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical protein K02B12.7 protein. Length = 423 Score = 47.6 bits (108), Expect = 9e-06 Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 1/72 (1%) Frame = +1 Query: 37 ILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSISMATFT 213 +L+EL + N +C +C P +V+ + G ++C +CSG+ R L V+S++M + Sbjct: 9 VLKELRPCDDNNFCFECEANNPQWVSVSYGIWICLECSGIHRSLGVHLSFVRSVTMDKWK 68 Query: 214 PEEIEFIKSRGN 249 E+ +K+ GN Sbjct: 69 DIELAKMKAGGN 80 >U23486-3|AAL38955.1| 529|Caenorhabditis elegans Hypothetical protein F07F6.4 protein. Length = 529 Score = 44.4 bits (100), Expect = 8e-05 Identities = 18/43 (41%), Positives = 25/43 (58%) Frame = +1 Query: 40 LRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL 168 +R++ +L NK C DC R PT+ T G F+C CS + R L Sbjct: 16 MRKMRALPPNKLCFDCGARNPTWCTVTYGVFLCIDCSAVHRNL 58 >AL023828-18|CAA19462.2| 742|Caenorhabditis elegans Hypothetical protein Y17G7B.15b protein. Length = 742 Score = 42.7 bits (96), Expect = 2e-04 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = +1 Query: 64 GNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSISMATFTPEEIEFIKS 240 GN+ C DC P +V+ +G +C +CSG R L +V+S+ M + E + + + Sbjct: 374 GNEVCADCGSPAPKWVSINLGVVLCIECSGAHRSLGVQTSKVRSLCMDSIDNELRDVLLA 433 Query: 241 RGNDYVD 261 GN V+ Sbjct: 434 LGNRQVN 440 >AL023828-17|CAA19463.2| 826|Caenorhabditis elegans Hypothetical protein Y17G7B.15a protein. Length = 826 Score = 42.7 bits (96), Expect = 2e-04 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = +1 Query: 64 GNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSISMATFTPEEIEFIKS 240 GN+ C DC P +V+ +G +C +CSG R L +V+S+ M + E + + + Sbjct: 458 GNEVCADCGSPAPKWVSINLGVVLCIECSGAHRSLGVQTSKVRSLCMDSIDNELRDVLLA 517 Query: 241 RGNDYVD 261 GN V+ Sbjct: 518 LGNRQVN 524 >AJ132699-1|CAA10735.1| 742|Caenorhabditis elegans centaurin beta 1B protein. Length = 742 Score = 42.7 bits (96), Expect = 2e-04 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = +1 Query: 64 GNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSISMATFTPEEIEFIKS 240 GN+ C DC P +V+ +G +C +CSG R L +V+S+ M + E + + + Sbjct: 374 GNEVCADCGSPAPKWVSINLGVVLCIECSGAHRSLGVQTSKVRSLCMDSIDNELRDVLLA 433 Query: 241 RGNDYVD 261 GN V+ Sbjct: 434 LGNRQVN 440 >AJ132698-1|CAA10734.1| 826|Caenorhabditis elegans centaurin beta 1A protein. Length = 826 Score = 42.7 bits (96), Expect = 2e-04 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = +1 Query: 64 GNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSISMATFTPEEIEFIKS 240 GN+ C DC P +V+ +G +C +CSG R L +V+S+ M + E + + + Sbjct: 458 GNEVCADCGSPAPKWVSINLGVVLCIECSGAHRSLGVQTSKVRSLCMDSIDNELRDVLLA 517 Query: 241 RGNDYVD 261 GN V+ Sbjct: 518 LGNRQVN 524 >AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical protein Y39A1A.15c protein. Length = 903 Score = 40.7 bits (91), Expect = 0.001 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Frame = +1 Query: 49 LISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSISMATFTPEEI 225 L S+ GN C DC + + +G +C +CSG+ R L + +V+ + + + E + Sbjct: 624 LRSIPGNGRCADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVRGLELDQWPVEHL 683 Query: 226 EFIKSRGND 252 +++ GND Sbjct: 684 AVMQAIGND 692 >AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical protein Y39A1A.15b protein. Length = 951 Score = 40.7 bits (91), Expect = 0.001 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Frame = +1 Query: 49 LISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSISMATFTPEEI 225 L S+ GN C DC + + +G +C +CSG+ R L + +V+ + + + E + Sbjct: 672 LRSIPGNGRCADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVRGLELDQWPVEHL 731 Query: 226 EFIKSRGND 252 +++ GND Sbjct: 732 AVMQAIGND 740 >AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical protein Y39A1A.15a protein. Length = 1107 Score = 40.7 bits (91), Expect = 0.001 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Frame = +1 Query: 49 LISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSISMATFTPEEI 225 L S+ GN C DC + + +G +C +CSG+ R L + +V+ + + + E + Sbjct: 828 LRSIPGNGRCADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVRGLELDQWPVEHL 887 Query: 226 EFIKSRGND 252 +++ GND Sbjct: 888 AVMQAIGND 896 >AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gamma 1B protein. Length = 1107 Score = 40.7 bits (91), Expect = 0.001 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Frame = +1 Query: 49 LISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSISMATFTPEEI 225 L S+ GN C DC + + +G +C +CSG+ R L + +V+ + + + E + Sbjct: 828 LRSIPGNGRCADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVRGLELDQWPVEHL 887 Query: 226 EFIKSRGND 252 +++ GND Sbjct: 888 AVMQAIGND 896 >AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gamma 1A protein. Length = 952 Score = 40.7 bits (91), Expect = 0.001 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Frame = +1 Query: 49 LISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSISMATFTPEEI 225 L S+ GN C DC + + +G +C +CSG+ R L + +V+ + + + E + Sbjct: 673 LRSIPGNGRCADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVRGLELDQWPVEHL 732 Query: 226 EFIKSRGND 252 +++ GND Sbjct: 733 AVMQAIGND 741 >AF003384-2|AAL08040.1| 428|Caenorhabditis elegans Acyltransferase-like protein 14,isoform b protein. Length = 428 Score = 30.3 bits (65), Expect = 1.4 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = +3 Query: 243 RERLCRLVWLGLYDGESINFTDEQSVRDFMLDKYEKK 353 RE+ V +YD + F DE+ +RD+M + Y++K Sbjct: 328 REKCDIAVNYKIYDAAEVPFEDEEKLRDWMYEVYKEK 364 >AF003384-1|AAK71374.2| 415|Caenorhabditis elegans Acyltransferase-like protein 14,isoform a protein. Length = 415 Score = 30.3 bits (65), Expect = 1.4 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = +3 Query: 243 RERLCRLVWLGLYDGESINFTDEQSVRDFMLDKYEKK 353 RE+ V +YD + F DE+ +RD+M + Y++K Sbjct: 315 REKCDIAVNYKIYDAAEVPFEDEEKLRDWMYEVYKEK 351 >Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical protein C28D4.1 protein. Length = 437 Score = 28.3 bits (60), Expect = 5.6 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +3 Query: 93 KRTYLCEYNNRIICLFKMFRNATR 164 KRTY C +NN I FK +RN R Sbjct: 55 KRTYKCSFNNECIIEFK-YRNRCR 77 >Z81481-8|CAB63438.2| 343|Caenorhabditis elegans Hypothetical protein C38D9.9 protein. Length = 343 Score = 28.3 bits (60), Expect = 5.6 Identities = 13/41 (31%), Positives = 24/41 (58%) Frame = -3 Query: 543 KLFTNFAV*IAFYWMHFSKIAAKSISEVLQRLLHFQPWLLT 421 +LF NF+ + Y F + A+ + E+L ++ +F+ W LT Sbjct: 256 QLFANFSK-LKAYLKFFREDHARDLKEILPKIPNFKSWTLT 295 >AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear receptor NHR-100 protein. Length = 437 Score = 28.3 bits (60), Expect = 5.6 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +3 Query: 93 KRTYLCEYNNRIICLFKMFRNATR 164 KRTY C +NN I FK +RN R Sbjct: 55 KRTYKCSFNNECIIEFK-YRNRCR 77 >AF332207-1|AAK17978.1| 378|Caenorhabditis elegans nuclear receptor NHR-57 protein. Length = 378 Score = 27.9 bits (59), Expect = 7.4 Identities = 13/43 (30%), Positives = 19/43 (44%) Frame = +1 Query: 43 RELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGLT 171 +E++ KYC C+Q G Y G+ C C+ R T Sbjct: 3 QEMLVARERKYCSVCHQLGDGY---HFGAIACKACAAFFRRTT 42 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,670,367 Number of Sequences: 27780 Number of extensions: 265485 Number of successful extensions: 731 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 693 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 730 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1624019012 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -