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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0493
         (701 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g13350.2 68417.m02088 human Rev interacting-like protein-rela...    93   2e-19
At4g13350.1 68417.m02087 human Rev interacting-like protein-rela...    93   2e-19
At1g08680.2 68414.m00965 ARF GAP-like zinc finger-containing pro...    82   3e-16
At1g08680.1 68414.m00964 ARF GAP-like zinc finger-containing pro...    82   3e-16
At5g54310.1 68418.m06764 ARF GAP-like zinc finger-containing pro...    65   5e-11
At3g17660.1 68416.m02255 human Rev interacting-like family prote...    63   2e-10
At4g17890.1 68417.m02666 human Rev interacting-like family prote...    56   2e-08
At3g07940.1 68416.m00971 zinc finger and C2 domain protein, puta...    56   3e-08
At5g46750.1 68418.m05759 human Rev interacting-like family prote...    54   7e-08
At3g53710.1 68416.m05933 ARF GAP-like zinc finger-containing pro...    54   9e-08
At2g37550.1 68415.m04605 arabidopsis pde1 suppressor 1 protein (...    54   1e-07
At2g35210.2 68415.m04318 human Rev interacting-like family prote...    52   3e-07
At2g35210.1 68415.m04319 human Rev interacting-like family prote...    52   3e-07
At4g05330.1 68417.m00815 zinc finger and C2 domain protein, puta...    50   1e-06
At4g21160.4 68417.m03061 zinc finger and C2 domain protein (ZAC)...    49   3e-06
At4g21160.3 68417.m03060 zinc finger and C2 domain protein (ZAC)...    49   3e-06
At4g21160.2 68417.m03059 zinc finger and C2 domain protein (ZAC)...    49   3e-06
At4g21160.1 68417.m03058 zinc finger and C2 domain protein (ZAC)...    49   3e-06
At1g60860.1 68414.m06851 ARF GTPase-activating domain-containing...    44   7e-05
At5g61980.1 68418.m07779 ARF GTPase-activating domain-containing...    44   1e-04
At1g10870.1 68414.m01249 ARF GTPase-activating domain-containing...    42   3e-04
At5g13300.1 68418.m01528 ARF GTPase-activating domain-containing...    42   4e-04
At4g32630.1 68417.m04645 hypothetical protein                          33   0.18 
At5g39230.1 68418.m04751 transcription initiation factor-related...    29   3.0  
At3g09370.1 68416.m01111 myb family transcription factor (MYB3R3...    28   6.9  
At2g41630.1 68415.m05144 transcription initiation factor IIB-1 /...    27   9.1  

>At4g13350.2 68417.m02088 human Rev interacting-like protein-related
           / hRIP protein-related similar to SP|P52594
           Nucleoporin-like protein RIP (HIV-1 Rev-binding protein)
           (Rev interacting protein) (Rev/Rex activation
           domain-binding protein) {Homo sapiens}; contains Pfam
           profile PF01412: Putative GTPase activating protein for
           Arf
          Length = 602

 Score = 92.7 bits (220), Expect = 2e-19
 Identities = 44/85 (51%), Positives = 58/85 (68%)
 Frame = +1

Query: 1   ANRRKQDDKNLEILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGLTPPH 180
           A R K+D+KN +I+R L+ L  NK C++CN  GP YV TT  +FVC+ CSG+ R  T  H
Sbjct: 2   AGRVKEDEKNEKIIRSLLKLPENKRCINCNSLGPQYVCTTFWTFVCTNCSGIHREFT--H 59

Query: 181 RVKSISMATFTPEEIEFIKSRGNDY 255
           RVKSISMA FT +E+  +K  GN +
Sbjct: 60  RVKSISMAKFTSQEVTALKEGGNQH 84


>At4g13350.1 68417.m02087 human Rev interacting-like protein-related
           / hRIP protein-related similar to SP|P52594
           Nucleoporin-like protein RIP (HIV-1 Rev-binding protein)
           (Rev interacting protein) (Rev/Rex activation
           domain-binding protein) {Homo sapiens}; contains Pfam
           profile PF01412: Putative GTPase activating protein for
           Arf
          Length = 602

 Score = 92.7 bits (220), Expect = 2e-19
 Identities = 44/85 (51%), Positives = 58/85 (68%)
 Frame = +1

Query: 1   ANRRKQDDKNLEILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGLTPPH 180
           A R K+D+KN +I+R L+ L  NK C++CN  GP YV TT  +FVC+ CSG+ R  T  H
Sbjct: 2   AGRVKEDEKNEKIIRSLLKLPENKRCINCNSLGPQYVCTTFWTFVCTNCSGIHREFT--H 59

Query: 181 RVKSISMATFTPEEIEFIKSRGNDY 255
           RVKSISMA FT +E+  +K  GN +
Sbjct: 60  RVKSISMAKFTSQEVTALKEGGNQH 84


>At1g08680.2 68414.m00965 ARF GAP-like zinc finger-containing
           protein ZiGA4 (ZIGA4) nearly identical to ARF GAP-like
           zinc finger-containing protein ZiGA4 GI:10441354 from
           [Arabidopsis thaliana]; contains InterPro accession
           IPR001164: Human Rev interacting-like protein (hRIP)
          Length = 648

 Score = 82.2 bits (194), Expect = 3e-16
 Identities = 36/80 (45%), Positives = 57/80 (71%)
 Frame = +1

Query: 10  RKQDDKNLEILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGLTPPHRVK 189
           ++++++N +I+R L+ L  N+ C++CN  GP YV TT  +FVC  CSG+ R  T  HRVK
Sbjct: 5   KREEERNEKIIRGLMKLPPNRRCINCNSLGPQYVCTTFWTFVCMACSGIHREFT--HRVK 62

Query: 190 SISMATFTPEEIEFIKSRGN 249
           S+SM+ FT +E+E +++ GN
Sbjct: 63  SVSMSKFTSKEVEVLQNGGN 82


>At1g08680.1 68414.m00964 ARF GAP-like zinc finger-containing
           protein ZiGA4 (ZIGA4) nearly identical to ARF GAP-like
           zinc finger-containing protein ZiGA4 GI:10441354 from
           [Arabidopsis thaliana]; contains InterPro accession
           IPR001164: Human Rev interacting-like protein (hRIP)
          Length = 649

 Score = 82.2 bits (194), Expect = 3e-16
 Identities = 36/80 (45%), Positives = 57/80 (71%)
 Frame = +1

Query: 10  RKQDDKNLEILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGLTPPHRVK 189
           ++++++N +I+R L+ L  N+ C++CN  GP YV TT  +FVC  CSG+ R  T  HRVK
Sbjct: 5   KREEERNEKIIRGLMKLPPNRRCINCNSLGPQYVCTTFWTFVCMACSGIHREFT--HRVK 62

Query: 190 SISMATFTPEEIEFIKSRGN 249
           S+SM+ FT +E+E +++ GN
Sbjct: 63  SVSMSKFTSKEVEVLQNGGN 82


>At5g54310.1 68418.m06764 ARF GAP-like zinc finger-containing
           protein ZIGA3 (ZIGA3) nearly identical to ARF GAP-like
           zinc finger-containing protein ZIGA3 GI:10441352 from
           [Arabidopsis thaliana]; contains InterPro accession
           IPR001164: Human Rev interacting-like protein (hRIP)
          Length = 483

 Score = 64.9 bits (151), Expect = 5e-11
 Identities = 31/86 (36%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
 Frame = +1

Query: 1   ANRRKQ-DDKNLEILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TP 174
           AN  K+ + ++ +IL  L+    N+ C DC  +GP + +  +G F+C +CSG+ R L   
Sbjct: 5   ANVSKELNARHRKILEGLLKHPENRECADCKTKGPRWASVNLGIFICMQCSGIHRSLGVH 64

Query: 175 PHRVKSISMATFTPEEIEFIKSRGND 252
             +V+S ++ T+ PE++ FI+S GND
Sbjct: 65  ISKVRSATLDTWLPEQVAFIQSMGND 90


>At3g17660.1 68416.m02255 human Rev interacting-like family protein
           / hRIP family protein similar to ARF GAP-like zinc
           finger-containing protein ZIGA3 GI:10441352 from
           [Arabidopsis thaliana]; contains InterPro accession
           IPR001164: Human Rev interacting-like protein (hRIP)
          Length = 117

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
 Frame = +1

Query: 25  KNLEILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSISM 201
           K+ +IL  L+    N+ C DC  + P + +  +G F+C +CSG+ R L     +V+SI++
Sbjct: 14  KHSKILEALLKHPDNRECADCRSKAPRWASVNLGIFICMQCSGIHRSLGVHISQVRSITL 73

Query: 202 ATFTPEEIEFIKSRGN 249
            T+ P+++ F+KS GN
Sbjct: 74  DTWLPDQVAFMKSTGN 89


>At4g17890.1 68417.m02666 human Rev interacting-like family protein
           / hRIP family protein contains InterPro accession
           IPR001164: Human Rev interacting-like protein (hRIP)
          Length = 413

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
 Frame = +1

Query: 22  DKNLEILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSIS 198
           DKN+ + R+L S + NK C DC+ + PT+ + T G F+C  CS   R L      V+S +
Sbjct: 11  DKNI-VFRKLKSKSENKVCFDCSAKNPTWASVTYGIFLCIDCSATHRNLGVHISFVRSTN 69

Query: 199 MATFTPEEIEFIKSRGNDYVDLF 267
           + +++PE++  +   GN+   +F
Sbjct: 70  LDSWSPEQLRTMMFGGNNRAQVF 92


>At3g07940.1 68416.m00971 zinc finger and C2 domain protein,
           putative similar to zinc finger and C2 domain protein
           GI:9957238 from [Arabidopsis thaliana];contains Pfam
           profile: PF01412 Putative GTP-ase activating protein for
           Arf
          Length = 385

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
 Frame = +1

Query: 40  LRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSISMATFTP 216
           L +L+   GNKYC DC    P +V+ ++G F+C KCSG+ R L     +V S+ +  +T 
Sbjct: 50  LEKLLKQPGNKYCADCGSPEPKWVSLSLGVFICIKCSGVHRSLGVHISKVLSVKLDEWTD 109

Query: 217 EEIEFIKSRGND 252
           ++++ +   G +
Sbjct: 110 DQVDMLVGYGGN 121


>At5g46750.1 68418.m05759 human Rev interacting-like family protein
           / hRIP family protein contains Pfam profile PF01412:
           Putative GTP-ase activating protein for Arf
          Length = 402

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
 Frame = +1

Query: 22  DKNLEILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSIS 198
           DKN+ + R+L S + NK C DC+ + PT+ +   G F+C  CS + R L      V+S +
Sbjct: 8   DKNV-VFRKLKSKSENKVCFDCSAKNPTWASVPYGIFLCIDCSAVHRSLGVHISFVRSTN 66

Query: 199 MATFTPEEIEFIKSRGNDYVDLF 267
           + +++PE++  +   GN+   +F
Sbjct: 67  LDSWSPEQLRTMMFGGNNRAQVF 89


>At3g53710.1 68416.m05933 ARF GAP-like zinc finger-containing
           protein ZIGA2 (ZIGA2) nearly identical to ARF GAP-like
           zinc finger-containing protein ZIGA2 from GI:10441356
           [Arabidopsis thaliana]; contains InterPro accession
           IPR001164: Human Rev interacting-like protein (hRIP)
          Length = 459

 Score = 54.0 bits (124), Expect = 9e-08
 Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = +1

Query: 40  LRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSISMATFTP 216
           LR L S   NK C+DC Q+ P + + + G F+C +CSG  RGL      V+S++M +++ 
Sbjct: 7   LRTLQSQPENKVCVDCAQKNPQWASVSYGIFMCLECSGKHRGLGVHISFVRSVTMDSWSA 66

Query: 217 EEIEFIKSRGNDYVDLF 267
            +I+ +++ GN+ ++ F
Sbjct: 67  IQIKKMEAGGNERLNKF 83


>At2g37550.1 68415.m04605 arabidopsis pde1 suppressor 1 protein
           (ASP1) identical to arabidopsis pde1 suppressor 1 (Asp1)
           from GI:4519792 [Arabidopsis thaliana]; contains
           InterPro accession IPR001164: Human Rev interacting-like
           protein (hRIP)
          Length = 456

 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = +1

Query: 40  LRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSISMATFTP 216
           LR L S   NK C+DC+Q+ P + + + G F+C +CSG  RGL      V+S++M +++ 
Sbjct: 7   LRTLQSQPENKVCVDCSQKNPQWASISYGIFMCLECSGKHRGLGVHISFVRSVTMDSWSE 66

Query: 217 EEIEFIKSRGNDYVDLF 267
            +I+ + + GN+ ++ F
Sbjct: 67  IQIKKMDAGGNERLNNF 83


>At2g35210.2 68415.m04318 human Rev interacting-like family protein
           / hRIP family protein similar to ARFGAP1 protein
           GI:7211442 from [Homo sapiens]; contains InterPro
           accession IPR001164: Human Rev interacting-like protein
           (hRIP)
          Length = 371

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 25/84 (29%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
 Frame = +1

Query: 19  DDKNLEILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSI 195
           +DK + + ++L + + NK C DCN + PT+ + T G F+C  CS + R L      V+S 
Sbjct: 7   NDK-ISVFKKLKAKSDNKICFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRST 65

Query: 196 SMATFTPEEIEFIKSRGNDYVDLF 267
           ++ +++ E+++ +   GN+   +F
Sbjct: 66  NLDSWSSEQLKMMIYGGNNRAQVF 89


>At2g35210.1 68415.m04319 human Rev interacting-like family protein
           / hRIP family protein similar to ARFGAP1 protein
           GI:7211442 from [Homo sapiens]; contains InterPro
           accession IPR001164: Human Rev interacting-like protein
           (hRIP)
          Length = 395

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 25/84 (29%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
 Frame = +1

Query: 19  DDKNLEILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSI 195
           +DK + + ++L + + NK C DCN + PT+ + T G F+C  CS + R L      V+S 
Sbjct: 7   NDK-ISVFKKLKAKSDNKICFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRST 65

Query: 196 SMATFTPEEIEFIKSRGNDYVDLF 267
           ++ +++ E+++ +   GN+   +F
Sbjct: 66  NLDSWSSEQLKMMIYGGNNRAQVF 89


>At4g05330.1 68417.m00815 zinc finger and C2 domain protein,
           putative similar to zinc finger and C2 domain protein
           GI:9957238 from [Arabidopsis thaliana]
          Length = 336

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
 Frame = +1

Query: 40  LRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSISMATFTP 216
           +R+L++   N+ C DC    P + +  IG F+C KC G+ R L T   +V S+++  ++ 
Sbjct: 18  IRDLLNQPDNRVCADCGASDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVTLDEWSD 77

Query: 217 EEIE-FIKSRGN 249
           EE++  I+  GN
Sbjct: 78  EEVDSMIEIGGN 89


>At4g21160.4 68417.m03061 zinc finger and C2 domain protein (ZAC)
           identical to zinc finger and C2 domain protein
           GI:9957238 from [Arabidopsis thaliana]
          Length = 337

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
 Frame = +1

Query: 40  LRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSISMATFTP 216
           +R+L++ + N+ C DC    P + +  IG F+C KC G+ R L +   +V S+++  ++ 
Sbjct: 18  IRDLLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHISKVLSVTLDEWSD 77

Query: 217 EEIE-FIKSRGN 249
           EE++  I+  GN
Sbjct: 78  EEVDSMIEIGGN 89


>At4g21160.3 68417.m03060 zinc finger and C2 domain protein (ZAC)
           identical to zinc finger and C2 domain protein
           GI:9957238 from [Arabidopsis thaliana]
          Length = 337

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
 Frame = +1

Query: 40  LRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSISMATFTP 216
           +R+L++ + N+ C DC    P + +  IG F+C KC G+ R L +   +V S+++  ++ 
Sbjct: 18  IRDLLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHISKVLSVTLDEWSD 77

Query: 217 EEIE-FIKSRGN 249
           EE++  I+  GN
Sbjct: 78  EEVDSMIEIGGN 89


>At4g21160.2 68417.m03059 zinc finger and C2 domain protein (ZAC)
           identical to zinc finger and C2 domain protein
           GI:9957238 from [Arabidopsis thaliana]
          Length = 337

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
 Frame = +1

Query: 40  LRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSISMATFTP 216
           +R+L++ + N+ C DC    P + +  IG F+C KC G+ R L +   +V S+++  ++ 
Sbjct: 18  IRDLLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHISKVLSVTLDEWSD 77

Query: 217 EEIE-FIKSRGN 249
           EE++  I+  GN
Sbjct: 78  EEVDSMIEIGGN 89


>At4g21160.1 68417.m03058 zinc finger and C2 domain protein (ZAC)
           identical to zinc finger and C2 domain protein
           GI:9957238 from [Arabidopsis thaliana]
          Length = 337

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
 Frame = +1

Query: 40  LRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSISMATFTP 216
           +R+L++ + N+ C DC    P + +  IG F+C KC G+ R L +   +V S+++  ++ 
Sbjct: 18  IRDLLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHISKVLSVTLDEWSD 77

Query: 217 EEIE-FIKSRGN 249
           EE++  I+  GN
Sbjct: 78  EEVDSMIEIGGN 89


>At1g60860.1 68414.m06851 ARF GTPase-activating domain-containing
           protein
          Length = 776

 Score = 44.4 bits (100), Expect = 7e-05
 Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
 Frame = +1

Query: 22  DKNLEILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSIS 198
           D  L ILRE+    GN  C +CN   P + +  +G  +C +CSG+ R L     +V+S++
Sbjct: 467 DDVLTILREI---PGNNTCAECNAPDPDWASLNLGVLMCIECSGVHRNLGVHISKVRSLT 523

Query: 199 M--ATFTPEEIEFIKSRGNDY 255
           +    + P  ++  ++ GN Y
Sbjct: 524 LDVKVWEPTILDLFRNLGNGY 544


>At5g61980.1 68418.m07779 ARF GTPase-activating domain-containing
           protein similar to GCN4-complementing protein (GCP1)
           GI:6465806 from [Arabidopsis thaliana]
          Length = 850

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
 Frame = +1

Query: 22  DKNLEILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSIS 198
           +K +++L  ++   GN+ C DC    P + +  +G  +C +CSG+ R L     +V+S++
Sbjct: 520 EKPIDVLTRVL---GNERCADCGAPEPDWASLNLGVLICIECSGIHRNLGVHISKVRSLT 576

Query: 199 M--ATFTPEEIEFIKSRGNDYVD 261
           +    + P  +   +S GN YV+
Sbjct: 577 LDVKVWEPSVLTLFQSLGNVYVN 599


>At1g10870.1 68414.m01249 ARF GTPase-activating domain-containing
           protein 
          Length = 775

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
 Frame = +1

Query: 49  LISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVKSISM--ATFTPE 219
           L  L GN  C +CN   P + +  +G  +C +CSG+ R L     +V+S+S+    + P 
Sbjct: 473 LRGLPGNNACAECNAPEPDWASLNLGVLLCIQCSGVHRNLGVHISKVRSLSLDVKVWEPT 532

Query: 220 EIEFIKSRGNDY 255
            ++  ++ GN Y
Sbjct: 533 ILDLFRNLGNVY 544


>At5g13300.1 68418.m01528 ARF GTPase-activating domain-containing
           protein similar to GCN4-complementing protein (GCP1)
           GI:6465806 from [Arabidopsis thaliana]
          Length = 768

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
 Frame = +1

Query: 13  KQDDKNLEILRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGL-TPPHRVK 189
           ++ +K ++ LR++    GN  C DC    P + +  +G  VC +CSG+ R L     +V+
Sbjct: 439 RKGEKPIDALRKVC---GNDKCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVR 495

Query: 190 SISM--ATFTPEEIEFIKSRGNDYVD 261
           S+++    + P  I   ++ GN + +
Sbjct: 496 SLTLDVKVWEPSVISLFQALGNTFAN 521


>At4g32630.1 68417.m04645 hypothetical protein 
          Length = 531

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +1

Query: 13  KQDDKNLEILRELISLNGNKYCLDCNQR-GPTYVNTTIGSFVCSKCSGMLRGLT 171
           K+D++  + +R L+ L  N+ C++CN   G T++       + ++ SG+L  LT
Sbjct: 2   KEDERTEKAIRSLLKLPENRRCINCNSLVGTTFLADHTVHNMYAQLSGLLSALT 55


>At5g39230.1 68418.m04751 transcription initiation factor-related
           contains weak similarity to Transcription initiation
           factor IIB (General transcription factor TFIIB)
           (Swiss-Prot:Q8W0W3) [Oryza sativa]
          Length = 119

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 76  CLDCNQRGPTYVNTTIGSFVCSKCSGML 159
           CLDC +R  T ++   G  +C++C  +L
Sbjct: 6   CLDCKKRTDTVIDYRSGDTICTECGLIL 33


>At3g09370.1 68416.m01111 myb family transcription factor (MYB3R3)
           contains Pfam profile: Myb DNA-binding proteins;
           identical to cDNA putative c-myb-like transcription
           factor (MYB3R3) GI:15375285
          Length = 505

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +1

Query: 166 LTPPHRVKSISMATFTPEEIEFIKSRGNDYVD 261
           L+PP+R++S   A F   ++EFI SR  +  D
Sbjct: 455 LSPPYRIRSKRTAVFKSRQLEFI-SREEEKAD 485


>At2g41630.1 68415.m05144 transcription initiation factor IIB-1 /
           general transcription factor TFIIB-1 (TFIIB1) identical
           to transcription initiation factor IIB-1 (TFIIB1)
           SP:P48512 from [Arabidopsis thaliana]
          Length = 312

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 73  YCLDCNQRGPTYVNTTIGSFVCSKCSGML 159
           YC DC +     V+ + G  +CS+C  +L
Sbjct: 5   YCTDCKKETELVVDHSAGDTLCSECGLVL 33


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,716,368
Number of Sequences: 28952
Number of extensions: 242885
Number of successful extensions: 620
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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