Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0492
         (785 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024756-6|AAK29881.1|  105|Caenorhabditis elegans Glutaredoxin ...    58   7e-09
U40945-3|AAA81721.2|  146|Caenorhabditis elegans Hypothetical pr...    45   5e-05
Z82082-4|CAE45093.1|  210|Caenorhabditis elegans Hypothetical pr...    39   0.005
AC006831-2|AAF39994.2|  119|Caenorhabditis elegans Hypothetical ...    38   0.006
AC006831-3|ABD63200.1|   96|Caenorhabditis elegans Hypothetical ...    33   0.18 
U58751-6|AAZ82854.1|  131|Caenorhabditis elegans Hypothetical pr...    33   0.23 
AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical ...    32   0.53 
Z75549-2|CAA99916.1|  313|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z98866-2|CAB11547.1|  142|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AF000264-2|AAC71121.1|  761|Caenorhabditis elegans Half transpor...    28   6.6  

>AC024756-6|AAK29881.1|  105|Caenorhabditis elegans Glutaredoxin
           protein 10 protein.
          Length = 105

 Score = 58.0 bits (134), Expect = 7e-09
 Identities = 28/52 (53%), Positives = 35/52 (67%)
 Frame = +1

Query: 253 VNERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 408
           ++ER D N IQD L  LTG R+VP+VFING   GGG D  A  ++GKL  +L
Sbjct: 48  IDERKDCNEIQDYLGSLTGARSVPRVFINGKFFGGGDDTAAGAKNGKLAALL 99



 Score = 41.1 bits (92), Expect = 9e-04
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = +2

Query: 134 FIKEAISKDKVVVFSKSYCPYCKLAKDVFEKV 229
           F+   +   KVVVFSKSYCPYC  A+   E V
Sbjct: 5   FVDGLLQSSKVVVFSKSYCPYCHKARAALESV 36


>U40945-3|AAA81721.2|  146|Caenorhabditis elegans Hypothetical
           protein F10D7.3 protein.
          Length = 146

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 20/43 (46%), Positives = 30/43 (69%)
 Frame = +1

Query: 280 IQDNLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 408
           +Q+ L + +G  TVPQ+FI+G  VGG  + KA+ E G+L P+L
Sbjct: 86  MQEILKKYSGRTTVPQLFISGKFVGGHDETKAIEEKGELRPLL 128



 Score = 32.3 bits (70), Expect = 0.40
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +2

Query: 122 DIQQFIKEAISKDKVVVFSKSYCPYCKLAKDVFEKVK-QPIKVIE 253
           D++  I   +   KV+V+SK+YCP+ K  K +    +   +K++E
Sbjct: 32  DLEDKIVNDVMTHKVMVYSKTYCPWSKRLKAILANYEIDDMKIVE 76


>Z82082-4|CAE45093.1|  210|Caenorhabditis elegans Hypothetical
           protein ZC334.7 protein.
          Length = 210

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 19/52 (36%), Positives = 30/52 (57%)
 Frame = +1

Query: 253 VNERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 408
           V + D    +Q +L ++T   T P VF+ GN +GG SD+  ++ SG+L   L
Sbjct: 151 VGDEDWQRQLQVDLLKVTRQATFPYVFVCGNFIGGSSDLFNMHHSGQLRQAL 202


>AC006831-2|AAF39994.2|  119|Caenorhabditis elegans Hypothetical
           protein ZK121.1a protein.
          Length = 119

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 14/38 (36%), Positives = 25/38 (65%)
 Frame = +2

Query: 137 IKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVI 250
           ++E + KD VV+++K+ C +C  AKD+F  V+   K +
Sbjct: 13  VQEQVKKDPVVMYTKTSCTFCNRAKDLFSDVRVAYKEV 50



 Score = 33.5 bits (73), Expect = 0.18
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +1

Query: 256 NERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGKL 396
           ++ DD   I + L   T   +VPQ+F+ G  +GG +++ AL  SG L
Sbjct: 58  SQPDDYLGIVNGLVYTTRQTSVPQIFVCGRFIGGYTELDALRNSGHL 104


>AC006831-3|ABD63200.1|   96|Caenorhabditis elegans Hypothetical
           protein ZK121.1b protein.
          Length = 96

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +1

Query: 256 NERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGKL 396
           ++ DD   I + L   T   +VPQ+F+ G  +GG +++ AL  SG L
Sbjct: 35  SQPDDYLGIVNGLVYTTRQTSVPQIFVCGRFIGGYTELDALRNSGHL 81


>U58751-6|AAZ82854.1|  131|Caenorhabditis elegans Hypothetical
           protein C07G1.8 protein.
          Length = 131

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = +1

Query: 292 LAQLTGFRTVPQVFINGNCVGGGSDVKAL 378
           L  LT  RTVPQ+FI G  VGG +++ AL
Sbjct: 76  LMDLTRQRTVPQIFICGKFVGGYTELNAL 104


>AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical
           protein R193.2 protein.
          Length = 1853

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 20/55 (36%), Positives = 27/55 (49%)
 Frame = -1

Query: 359 PPPTQLPFIKT*GTVLKPVSCARLS*MVFPSSRSFTQ*L*LVASLSQKHLLPAYS 195
           PPPT+LP I T GT   P     ++  +FP   S  Q +  +   SQ  LL  Y+
Sbjct: 425 PPPTRLPLITTIGTTTNPAVRTTVN-PLFPPIASCKQNVLFLIDQSQTLLLSGYN 478


>Z75549-2|CAA99916.1|  313|Caenorhabditis elegans Hypothetical
           protein T19C4.2 protein.
          Length = 313

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 23/107 (21%), Positives = 46/107 (42%), Gaps = 2/107 (1%)
 Frame = +2

Query: 467 WCTYKMLFTFQVN--SGCLCSYIYVLTNPFKKNVLLNSLLSRRQI*LSVVFR*NLIFKNI 640
           W  Y  +  F +N       S ++  T  F  N   ++ + R  +  +++F   + F+ +
Sbjct: 122 WIKYSFILIFAINLLPFINTSQLFYSTCQFG-NRSDDTFVLRCDLPTNLLFTPLIYFQGV 180

Query: 641 CSCCNLYFNLQKCSLDSPQLADQILRMAVNIQIDIPTERALEIIFFF 781
           C+ C+L  N++ CS+      +    M  N  I I    A++ +  F
Sbjct: 181 CTLCSLICNIKSCSIVWKASIEMKANMEANFLILITVTSAVQTLGAF 227


>Z98866-2|CAB11547.1|  142|Caenorhabditis elegans Hypothetical
           protein Y49E10.2 protein.
          Length = 142

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +1

Query: 316 TVPQVFINGNCVGGGSDVKALYESGKLEPML 408
           T+PQV++ G  VGG   + ++++ G++   L
Sbjct: 100 TIPQVYVKGEFVGGCDILISMHKDGEISDFL 130


>AF000264-2|AAC71121.1|  761|Caenorhabditis elegans Half transporter
           (pgp related)protein 2 protein.
          Length = 761

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 309 TSQLCEIILNGVSIITFIHSITLIGCFTFSKTSFASLQ*G 190
           T+Q+   I+N   I   IHSI ++ C T + + F  L+ G
Sbjct: 220 TAQVISDIVNKRGIQALIHSIIVLTCLTATSSLFGGLRGG 259


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,759,149
Number of Sequences: 27780
Number of extensions: 367973
Number of successful extensions: 992
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)