Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0490
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    27   0.12 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    27   0.22 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    27   0.22 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    27   0.22 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    27   0.22 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    24   1.2  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    24   1.2  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   3.5  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   3.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.5  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   8.1  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 541 LKSLIREFFQTNNFSLTVLCYTTMYFFKFTLYGVLN 434
           L  LIR+    + +++T LC         T+YG+L+
Sbjct: 273 LSKLIRDVGNASGYTVTFLCLYLFLIITLTIYGLLS 308


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = -1

Query: 225 FQMFLI-YFTHTLHAV-VDAFVV*VSPGFGPRTGLHQQNCVTHV*RIFKILIK*YKRSVV 52
           F  FLI +FT TLH V +   +  + P      G    NC+  V  +  +L +  K S  
Sbjct: 164 FSHFLIVFFTETLHTVGIALLIFYILPDLDVVKGAMLTNCICFVPGVLGLLSRSNKESQR 223

Query: 51  FI 46
           F+
Sbjct: 224 FL 225


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = -1

Query: 225 FQMFLI-YFTHTLHAV-VDAFVV*VSPGFGPRTGLHQQNCVTHV*RIFKILIK*YKRSVV 52
           F  FLI +FT TLH V +   +  + P      G    NC+  V  +  +L +  K S  
Sbjct: 164 FSHFLIVFFTETLHTVGIALLIFYILPDLDVVKGAMLTNCICFVPGVLGLLSRSNKESQR 223

Query: 51  FI 46
           F+
Sbjct: 224 FL 225


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = -1

Query: 225 FQMFLI-YFTHTLHAV-VDAFVV*VSPGFGPRTGLHQQNCVTHV*RIFKILIK*YKRSVV 52
           F  FLI +FT TLH V +   +  + P      G    NC+  V  +  +L +  K S  
Sbjct: 164 FSHFLIVFFTETLHTVGIALLIFYILPDLDVVKGAMLTNCICFVPGVLGLLSRSNKESQR 223

Query: 51  FI 46
           F+
Sbjct: 224 FL 225


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = -1

Query: 225 FQMFLI-YFTHTLHAV-VDAFVV*VSPGFGPRTGLHQQNCVTHV*RIFKILIK*YKRSVV 52
           F  FLI +FT TLH V +   +  + P      G    NC+  V  +  +L +  K S  
Sbjct: 164 FSHFLIVFFTETLHTVGIALLIFYILPDLDVVKGAMLTNCICFVPGVLGLLSRSNKESQR 223

Query: 51  FI 46
           F+
Sbjct: 224 FL 225


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 698 TTKVSNIGLNNVHTLTTACMWDGLIVFTL 612
           T K+S  GL  + T+T   MW G ++ T+
Sbjct: 271 TVKIS--GLFEITTITAMVMWFGYVIDTM 297


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 698 TTKVSNIGLNNVHTLTTACMWDGLIVFTL 612
           T K+S  GL  + T+T   MW G ++ T+
Sbjct: 227 TVKIS--GLFEITTITAMVMWFGYVIDTM 253


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = +1

Query: 142 PETRTYSDYESVNDCMEGVCKIYEEHLKRRNPNTP 246
           P+ R     + V    E +  + EE+ +  +PN P
Sbjct: 324 PDVRGIKSVQEVEMLREKIYGVLEEYTRTTHPNEP 358


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -1

Query: 525 ENFSKQIISLLLYYVTQLCIFSSLHCTVFLMLSFFYN 415
           +N  K ++    Y  TQ+ I   L   + L +SFF N
Sbjct: 115 DNKLKHMLIWKSYKRTQIFITCELFFVILLWISFFLN 151


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -1

Query: 507 IISLLLYYVTQLCIFSSLHCTVFLMLSFFYNLN 409
           II L +YY     I  ++H  + + + +FY ++
Sbjct: 233 IILLCIYYFYYAFILFTVHLLLLVCIYYFYYMH 265


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 131 PVRGPKPGLTQTTKASTT 184
           PV  P+P  TQTT++  T
Sbjct: 395 PVPTPEPQPTQTTESEPT 412


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,791
Number of Sequences: 336
Number of extensions: 4077
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)