Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0490
         (762 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0584 - 24082867-24082960,24083071-24083191,24083693-240837...    57   1e-08

>02_04_0584 -
           24082867-24082960,24083071-24083191,24083693-24083786,
           24084675-24084725
          Length = 119

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 22/48 (45%), Positives = 35/48 (72%)
 Frame = +3

Query: 255 YDISQLFDFVDQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAA 398
           YDI+ L++F+D LAD+S LVY  S   + PY++ WIK+K++  L++ A
Sbjct: 70  YDITDLYNFIDGLADISALVYDHSIQAFLPYDRQWIKQKLFQHLKKLA 117



 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 21/49 (42%), Positives = 32/49 (65%)
 Frame = +1

Query: 109 HTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNPNTPTIT 255
           HTI+L+QP     +RT+ DY S+N  ++G+C +YE  ++  NP  P IT
Sbjct: 21  HTIILMQPSQNRASRTFMDYNSINHALDGLCGLYERKIRDINPMVPNIT 69


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,908,355
Number of Sequences: 37544
Number of extensions: 345404
Number of successful extensions: 666
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)