Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0490
         (762 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73098-5|CAA97332.1|  103|Caenorhabditis elegans Hypothetical pr...    68   8e-12
Z46242-10|CAA86333.2|  113|Caenorhabditis elegans Hypothetical p...    58   7e-09
U28991-14|AAA68388.1|  352|Caenorhabditis elegans Hypothetical p...    31   0.68 
Z22179-4|CAA80161.1|  410|Caenorhabditis elegans Hypothetical pr...    29   4.8  

>Z73098-5|CAA97332.1|  103|Caenorhabditis elegans Hypothetical
           protein T21C9.4 protein.
          Length = 103

 Score = 67.7 bits (158), Expect = 8e-12
 Identities = 27/51 (52%), Positives = 40/51 (78%)
 Frame = +1

Query: 103 MSHTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNPNTPTIT 255
           MSHTILL+QP    E+R++SDYE+  +C+EG+C++YEE+LK++ P    IT
Sbjct: 1   MSHTILLLQPTDNIESRSWSDYENTTECLEGICRVYEEYLKKKVPAQNEIT 51



 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 27/55 (49%), Positives = 35/55 (63%)
 Frame = +3

Query: 222 EKAKP*YTHYHYDISQLFDFVDQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLL 386
           +K  P      YDIS LF+F+D L DLS LV   +T TY P+NK ++KE IY L+
Sbjct: 41  KKKVPAQNEITYDISHLFEFIDDLKDLSMLVLDNTTYTYVPHNKQYVKESIYKLM 95


>Z46242-10|CAA86333.2|  113|Caenorhabditis elegans Hypothetical
           protein F35G12.11 protein.
          Length = 113

 Score = 58.0 bits (134), Expect = 7e-09
 Identities = 23/55 (41%), Positives = 40/55 (72%), Gaps = 2/55 (3%)
 Frame = +1

Query: 106 SHTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRN--PNTPTITTIY 264
           SHT+LL+Q  PR ++RT+ DYESV D ++ +CK++E+ L +++  P T  ++ +Y
Sbjct: 5   SHTVLLIQTSPRLDSRTWGDYESVTDALDALCKMFEDFLSKKSAAPVTYDVSQVY 59



 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 16/45 (35%), Positives = 34/45 (75%)
 Frame = +3

Query: 255 YDISQLFDFVDQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLR 389
           YD+SQ+++F+D+L+D+S +++ + T  Y    + WIK+++Y ++R
Sbjct: 53  YDVSQVYEFLDKLSDVSMMIFNRETGQYIGRTRAWIKQQVYEMMR 97


>U28991-14|AAA68388.1|  352|Caenorhabditis elegans Hypothetical
           protein F08F8.1 protein.
          Length = 352

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = +2

Query: 245 PLSLRYITTLRFCRPVG---RSELFSLSEIYKHIRTLQQRLDKGKDICFIAS 391
           P+S+  +TTLRFC+ +     + +F L   Y  I+T  +R+   K +  I S
Sbjct: 300 PISMNQVTTLRFCQTIEFCVENSVFVLVTRYIEIKTFNRRIVPKKTVKVIPS 351


>Z22179-4|CAA80161.1|  410|Caenorhabditis elegans Hypothetical
           protein F58A4.4 protein.
          Length = 410

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +2

Query: 260 YITTLRFCRPVGRSELFSLSEIYK 331
           +IT  +F   VGR +L SLSE YK
Sbjct: 239 FITEYKFMSEVGRDDLRSLSETYK 262


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,684,929
Number of Sequences: 27780
Number of extensions: 353000
Number of successful extensions: 829
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)