Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0489
         (785 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   2.1  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           23   2.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.8  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   2.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.4  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 307 VFVPDEVDFTRRQPVL 260
           VFVPD V F   +P+L
Sbjct: 140 VFVPDYVFFVENEPIL 155


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = +2

Query: 203 YQALCIPTRFGASS*SEGTQDWLAAREIDFIRHEDWPSSSPDLN 334
           YQ  C   ++   +   GT DW   ++ D    E W   S D++
Sbjct: 197 YQ-FCDNLQYSFDNQCSGTIDWALPKQEDCFYQEGWNGQSFDVS 239


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 473 DWPRRLKACIQNT 511
           DWP  ++ C+Q+T
Sbjct: 961 DWPENVEGCMQHT 973


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
 Frame = +1

Query: 286 RLHPARRLALLQPRFESVRLQDMATLGGKGVLKASSQFGV------TQDILD*GSRRY*H 447
           R   AR   +  PR+   R     T+GG    +A++Q G+        D +D   RR  H
Sbjct: 41  RRRAARPGVVTTPRWGCARASSATTMGGPRYGRAAAQ-GMPYPRFPPYDRMDIRDRRSLH 99

Query: 448 GPRSCCD 468
           GP+   D
Sbjct: 100 GPQQQMD 106


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 152 SPDEPCGTCF 181
           S D PC TCF
Sbjct: 688 SSDNPCTTCF 697


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,848
Number of Sequences: 336
Number of extensions: 4603
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)