Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0489
         (785 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L28957-1|AAA72127.1|  367|Homo sapiens CTP:phosphocholine cytidy...    34   0.67 
BC046355-1|AAH46355.1|  367|Homo sapiens phosphate cytidylyltran...    34   0.67 
BC045634-1|AAH45634.2|  351|Homo sapiens PCYT1B protein protein.       32   2.7  
AF148464-1|AAD35088.1|  369|Homo sapiens CTP:phosphocholine cyti...    32   2.7  
AF052510-1|AAC39754.1|  330|Homo sapiens CTP:phosphocholine cyti...    32   2.7  
U52077-1|AAC52010.1|  343|Homo sapiens mariner transposase protein.    31   3.6  
AK054891-1|BAB70824.1|  230|Homo sapiens protein ( Homo sapiens ...    31   4.7  

>L28957-1|AAA72127.1|  367|Homo sapiens CTP:phosphocholine
           cytidylyltransferase protein.
          Length = 367

 Score = 33.9 bits (74), Expect = 0.67
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = +2

Query: 257 TQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAA 436
           T ++LA   IDF+ H+D P SS   +     +++H++E     P    E + TS I    
Sbjct: 154 TPEFLAEHRIDFVAHDDIPYSSAGSD----DVYKHIKEAGMFAPTQRTEGISTSDIITRI 209

Query: 437 DIDMDL 454
             D D+
Sbjct: 210 VRDYDV 215


>BC046355-1|AAH46355.1|  367|Homo sapiens phosphate
           cytidylyltransferase 1, choline, alpha protein.
          Length = 367

 Score = 33.9 bits (74), Expect = 0.67
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = +2

Query: 257 TQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAA 436
           T ++LA   IDF+ H+D P SS   +     +++H++E     P    E + TS I    
Sbjct: 154 TPEFLAEHRIDFVAHDDIPYSSAGSD----DVYKHIKEAGMFAPTQRTEGISTSDIITRI 209

Query: 437 DIDMDL 454
             D D+
Sbjct: 210 VRDYDV 215


>BC045634-1|AAH45634.2|  351|Homo sapiens PCYT1B protein protein.
          Length = 351

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 19/66 (28%), Positives = 32/66 (48%)
 Frame = +2

Query: 257 TQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAA 436
           T ++L   +IDF+ H+D P SS   +     +++H++E     P    E + TS I    
Sbjct: 136 TPEFLEKHKIDFVAHDDIPYSSAGSD----DVYKHIKEAGMFVPTQRTEGISTSDIITRI 191

Query: 437 DIDMDL 454
             D D+
Sbjct: 192 VRDYDV 197


>AF148464-1|AAD35088.1|  369|Homo sapiens CTP:phosphocholine
           cytidylyltransferase CCTB2 isoform protein.
          Length = 369

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 19/66 (28%), Positives = 32/66 (48%)
 Frame = +2

Query: 257 TQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAA 436
           T ++L   +IDF+ H+D P SS   +     +++H++E     P    E + TS I    
Sbjct: 154 TPEFLEKHKIDFVAHDDIPYSSAGSD----DVYKHIKEAGMFVPTQRTEGISTSDIITRI 209

Query: 437 DIDMDL 454
             D D+
Sbjct: 210 VRDYDV 215


>AF052510-1|AAC39754.1|  330|Homo sapiens CTP:phosphocholine
           cytidylyltransferase b protein.
          Length = 330

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 19/66 (28%), Positives = 32/66 (48%)
 Frame = +2

Query: 257 TQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAA 436
           T ++L   +IDF+ H+D P SS   +     +++H++E     P    E + TS I    
Sbjct: 154 TPEFLEKHKIDFVAHDDIPYSSAGSD----DVYKHIKEAGMFVPTQRTEGISTSDIITRI 209

Query: 437 DIDMDL 454
             D D+
Sbjct: 210 VRDYDV 215


>U52077-1|AAC52010.1|  343|Homo sapiens mariner transposase protein.
          Length = 343

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 16/64 (25%), Positives = 27/64 (42%)
 Frame = +2

Query: 311 PSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRL 490
           P  SPDL+P DY  ++HL+     K   N +  + +  +       D     I+    R 
Sbjct: 272 PPYSPDLSPTDYHFFKHLDNFLQGKRFHNQQDAENAFQEFVESRSTDFYATGINKLISRW 331

Query: 491 KACI 502
           + C+
Sbjct: 332 QKCV 335


>AK054891-1|BAB70824.1|  230|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30329 fis, clone BRACE2007201. ).
          Length = 230

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 21/74 (28%), Positives = 34/74 (45%)
 Frame = +3

Query: 165 LVEPVSHTMFWYHIRHCVFQQDSAPAHRAKAHKTGWRRVKSTSSGTKTGPPPAQI*IR*I 344
           +V P     +  H+  CV  QDS   H A+   T W   +  S+ ++ GP P       I
Sbjct: 71  VVGPHRARQWLLHMFCCVGSQDS--YHHARGGSTAWPWERVLSARSRGGPCPKTF----I 124

Query: 345 TRYGNTWRKRRAQS 386
            ++ +TW++ R  S
Sbjct: 125 LQWCSTWKRTRRSS 138


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,710,066
Number of Sequences: 237096
Number of extensions: 2613187
Number of successful extensions: 5107
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5103
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)