BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0489 (785 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value L28957-1|AAA72127.1| 367|Homo sapiens CTP:phosphocholine cytidy... 34 0.67 BC046355-1|AAH46355.1| 367|Homo sapiens phosphate cytidylyltran... 34 0.67 BC045634-1|AAH45634.2| 351|Homo sapiens PCYT1B protein protein. 32 2.7 AF148464-1|AAD35088.1| 369|Homo sapiens CTP:phosphocholine cyti... 32 2.7 AF052510-1|AAC39754.1| 330|Homo sapiens CTP:phosphocholine cyti... 32 2.7 U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein. 31 3.6 AK054891-1|BAB70824.1| 230|Homo sapiens protein ( Homo sapiens ... 31 4.7 >L28957-1|AAA72127.1| 367|Homo sapiens CTP:phosphocholine cytidylyltransferase protein. Length = 367 Score = 33.9 bits (74), Expect = 0.67 Identities = 20/66 (30%), Positives = 32/66 (48%) Frame = +2 Query: 257 TQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAA 436 T ++LA IDF+ H+D P SS + +++H++E P E + TS I Sbjct: 154 TPEFLAEHRIDFVAHDDIPYSSAGSD----DVYKHIKEAGMFAPTQRTEGISTSDIITRI 209 Query: 437 DIDMDL 454 D D+ Sbjct: 210 VRDYDV 215 >BC046355-1|AAH46355.1| 367|Homo sapiens phosphate cytidylyltransferase 1, choline, alpha protein. Length = 367 Score = 33.9 bits (74), Expect = 0.67 Identities = 20/66 (30%), Positives = 32/66 (48%) Frame = +2 Query: 257 TQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAA 436 T ++LA IDF+ H+D P SS + +++H++E P E + TS I Sbjct: 154 TPEFLAEHRIDFVAHDDIPYSSAGSD----DVYKHIKEAGMFAPTQRTEGISTSDIITRI 209 Query: 437 DIDMDL 454 D D+ Sbjct: 210 VRDYDV 215 >BC045634-1|AAH45634.2| 351|Homo sapiens PCYT1B protein protein. Length = 351 Score = 31.9 bits (69), Expect = 2.7 Identities = 19/66 (28%), Positives = 32/66 (48%) Frame = +2 Query: 257 TQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAA 436 T ++L +IDF+ H+D P SS + +++H++E P E + TS I Sbjct: 136 TPEFLEKHKIDFVAHDDIPYSSAGSD----DVYKHIKEAGMFVPTQRTEGISTSDIITRI 191 Query: 437 DIDMDL 454 D D+ Sbjct: 192 VRDYDV 197 >AF148464-1|AAD35088.1| 369|Homo sapiens CTP:phosphocholine cytidylyltransferase CCTB2 isoform protein. Length = 369 Score = 31.9 bits (69), Expect = 2.7 Identities = 19/66 (28%), Positives = 32/66 (48%) Frame = +2 Query: 257 TQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAA 436 T ++L +IDF+ H+D P SS + +++H++E P E + TS I Sbjct: 154 TPEFLEKHKIDFVAHDDIPYSSAGSD----DVYKHIKEAGMFVPTQRTEGISTSDIITRI 209 Query: 437 DIDMDL 454 D D+ Sbjct: 210 VRDYDV 215 >AF052510-1|AAC39754.1| 330|Homo sapiens CTP:phosphocholine cytidylyltransferase b protein. Length = 330 Score = 31.9 bits (69), Expect = 2.7 Identities = 19/66 (28%), Positives = 32/66 (48%) Frame = +2 Query: 257 TQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAA 436 T ++L +IDF+ H+D P SS + +++H++E P E + TS I Sbjct: 154 TPEFLEKHKIDFVAHDDIPYSSAGSD----DVYKHIKEAGMFVPTQRTEGISTSDIITRI 209 Query: 437 DIDMDL 454 D D+ Sbjct: 210 VRDYDV 215 >U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein. Length = 343 Score = 31.5 bits (68), Expect = 3.6 Identities = 16/64 (25%), Positives = 27/64 (42%) Frame = +2 Query: 311 PSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRL 490 P SPDL+P DY ++HL+ K N + + + + D I+ R Sbjct: 272 PPYSPDLSPTDYHFFKHLDNFLQGKRFHNQQDAENAFQEFVESRSTDFYATGINKLISRW 331 Query: 491 KACI 502 + C+ Sbjct: 332 QKCV 335 >AK054891-1|BAB70824.1| 230|Homo sapiens protein ( Homo sapiens cDNA FLJ30329 fis, clone BRACE2007201. ). Length = 230 Score = 31.1 bits (67), Expect = 4.7 Identities = 21/74 (28%), Positives = 34/74 (45%) Frame = +3 Query: 165 LVEPVSHTMFWYHIRHCVFQQDSAPAHRAKAHKTGWRRVKSTSSGTKTGPPPAQI*IR*I 344 +V P + H+ CV QDS H A+ T W + S+ ++ GP P I Sbjct: 71 VVGPHRARQWLLHMFCCVGSQDS--YHHARGGSTAWPWERVLSARSRGGPCPKTF----I 124 Query: 345 TRYGNTWRKRRAQS 386 ++ +TW++ R S Sbjct: 125 LQWCSTWKRTRRSS 138 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 119,710,066 Number of Sequences: 237096 Number of extensions: 2613187 Number of successful extensions: 5107 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 4781 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5103 length of database: 76,859,062 effective HSP length: 89 effective length of database: 55,757,518 effective search space used: 9590293096 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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