Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0488
         (719 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9U2D7 Cluster: Putative uncharacterized protein; n=1; ...    33   5.4  
UniRef50_Q7R8C0 Cluster: Putative uncharacterized protein PY0730...    33   9.4  
UniRef50_Q22NN4 Cluster: Hypothetical repeat containing protein;...    33   9.4  

>UniRef50_Q9U2D7 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 1002

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
 Frame = -2

Query: 460 HFTKKKIKQFSCSQRNTSCLIKQLINHERLYSNSSFNWFRISINTFL-YLKID*KCY--- 293
           H     I   S + R T C++KQ I   +   +    W  +SI T   Y +I  + Y   
Sbjct: 25  HLKTYDICILSATARKTKCIVKQSIERAKKRKSEDQRWLSLSIATRQNYFEIKYELYVFP 84

Query: 292 EKAQRMSATQNQRVQNITFAVSK 224
           EKA+R+S  Q +    + F  S+
Sbjct: 85  EKAERVSYRQLKGASPLVFDGSR 107


>UniRef50_Q7R8C0 Cluster: Putative uncharacterized protein PY07303;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY07303 - Plasmodium yoelii
           yoelii
          Length = 323

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 14/55 (25%), Positives = 29/55 (52%)
 Frame = +3

Query: 399 IKHDVFL*EHENCLIFFFVKC*KLRKYYNGNKQRAINRKSCFNYVNDTRKSNLIL 563
           ++H V   +H +C++F+        K++N N     N+    NY+ + RK+ L++
Sbjct: 110 LRHIVEKVQHFHCILFYMYSYMIKHKHFNYNNVEEGNKNIVLNYLKEKRKNMLLI 164


>UniRef50_Q22NN4 Cluster: Hypothetical repeat containing protein; n=1;
            Tetrahymena thermophila SB210|Rep: Hypothetical repeat
            containing protein - Tetrahymena thermophila SB210
          Length = 3149

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -2

Query: 430  SCSQRNTSCLIKQLINHERLYSNSSFNWFRISINTFLYLKID*KCYEKAQR 278
            SC Q  TSC+  Q  N E + + + +N  +I+ N  + LK   KC +   R
Sbjct: 1394 SCLQCGTSCINCQYENEESVLNYNKYNLRKIAYNDLIQLKFIQKCTQCMNR 1444


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,916,492
Number of Sequences: 1657284
Number of extensions: 11540100
Number of successful extensions: 23710
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23683
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)