Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0488
         (719 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF489106-1|AAM03127.1| 1192|Drosophila melanogaster unknown prot...    30   3.6  
AE014134-2811|AAF53590.3| 1876|Drosophila melanogaster CG4841-PA...    30   3.6  

>AF489106-1|AAM03127.1| 1192|Drosophila melanogaster unknown
           protein.
          Length = 1192

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = -1

Query: 668 SLNQSFFIVHI-ECKI*YNKQYIPPFLLLQKQF*IK*Y*VRFSRVVDIIKTTFTVNSALL 492
           S+N  F   HI  C+    K YI P    ++        +RFS +VDI   +F  +   L
Sbjct: 609 SINVEFVKFHITRCR----KVYIEPLPSSKRSLDQSRAVIRFSTIVDIGSASFKYDMRRL 664

Query: 491 ITIIIFPKFLALYKKK 444
             I+ FPK  A Y+++
Sbjct: 665 TEILAFPK--AWYRRR 678


>AE014134-2811|AAF53590.3| 1876|Drosophila melanogaster CG4841-PA
            protein.
          Length = 1876

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = -1

Query: 668  SLNQSFFIVHI-ECKI*YNKQYIPPFLLLQKQF*IK*Y*VRFSRVVDIIKTTFTVNSALL 492
            S+N  F   HI  C+    K YI P    ++        +RFS +VDI   +F  +   L
Sbjct: 995  SINVEFVKFHITRCR----KVYIEPLPSSKRSLDQSRAVIRFSTIVDIGSASFKYDMRRL 1050

Query: 491  ITIIIFPKFLALYKKK 444
              I+ FPK  A Y+++
Sbjct: 1051 TEILAFPK--AWYRRR 1064


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,957,376
Number of Sequences: 53049
Number of extensions: 510264
Number of successful extensions: 807
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)