Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0486
(745 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 1e-22
SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 1e-21
SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 8e-18
SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19) 86 3e-17
SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 8e-17
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 85 8e-17
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 84 1e-16
SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05) 76 3e-14
SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24) 64 2e-10
SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23) 55 7e-08
SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2) 37 0.015
SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.046
SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06) 35 0.080
SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11) 32 0.56
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 28 7.0
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_32386| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 103 bits (248), Expect = 1e-22
Identities = 51/76 (67%), Positives = 59/76 (77%)
Frame = +2
Query: 515 MANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVI 694
MANAGKDTNGSQFFITTVKT WLDG+HVVFGKVLEGMDVV+K+E V PVK +I
Sbjct: 1 MANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKLE-NVNVKGSTPVKTCMI 59
Query: 695 SDTKTEVVAEPFSVTK 742
D+ T + +PF+V K
Sbjct: 60 DDSGTLPLDKPFNVEK 75
>SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 100 bits (239), Expect = 1e-21
Identities = 51/101 (50%), Positives = 58/101 (57%)
Frame = +3
Query: 255 GDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXX 434
G G +++GLFG T PKT NF LA K +G GYK S FHRVIKNFMIQ
Sbjct: 35 GGQPAGRVILGLFGDTAPKTVANFVALADKEQGFGYKDSIFHRVIKNFMIQGGDFTNKDG 94
Query: 435 XXXRSIYGERFEDENFKLKHYGAGCYLWLMQAKTQMDLNFS 557
SIYG+ F+DENF LKHYG G WL A + N S
Sbjct: 95 TGGYSIYGKYFDDENFNLKHYGPG---WLCMANAGKNTNGS 132
Score = 98.3 bits (234), Expect = 6e-21
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = +2
Query: 509 LSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDV 688
L MANAGK+TNGSQF+ITT+KT WLDG H FGKVLEGMDVV++IE T +D+P+ +V
Sbjct: 120 LCMANAGKNTNGSQFYITTIKTSWLDGSHTCFGKVLEGMDVVRRIENTRVDTHDKPLDEV 179
Query: 689 VISDTKTEVVAEPFSVTKE 745
I+ + + P+ V K+
Sbjct: 180 KITGIGSIPIESPYEVAKD 198
>SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 87.8 bits (208), Expect = 8e-18
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +2
Query: 509 LSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDV 631
LSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVL+GM+V
Sbjct: 139 LSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLKGMEV 179
Score = 72.1 bits (169), Expect = 4e-13
Identities = 36/73 (49%), Positives = 44/73 (60%)
Frame = +3
Query: 339 QKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGCYLW 518
+ +G GYK S FHRVI++FMIQ +SIYG++F DENFKL+HYGAG W
Sbjct: 82 ESQKGFGYKNSIFHRVIQDFMIQGGDFTKGDGTGGKSIYGQKFADENFKLQHYGAG---W 138
Query: 519 LMQAKTQMDLNFS 557
L A D N S
Sbjct: 139 LSMANAGKDTNGS 151
>SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19)
Length = 99
Score = 85.8 bits (203), Expect = 3e-17
Identities = 38/65 (58%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Frame = +2
Query: 503 WLLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTG-ANDRPV 679
+ +SMANAG +TNGSQFFIT V TPWLD +H VFG+V++GMDV Q+I + T ND+P
Sbjct: 28 YTVSMANAGPNTNGSQFFITVVPTPWLDNKHTVFGRVVKGMDVAQQISLVKTNPKNDQPY 87
Query: 680 KDVVI 694
+D+ I
Sbjct: 88 EDIKI 92
>SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 84.6 bits (200), Expect = 8e-17
Identities = 44/78 (56%), Positives = 55/78 (70%)
Frame = +2
Query: 506 LLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 685
+LSMANAG TNGSQFF+ T KT WLDG+HVVFG V +GMDVV+KIE V + + K
Sbjct: 96 ILSMANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGMDVVKKIE-KVGSDSGKTSKK 154
Query: 686 VVISDTKTEVVAEPFSVT 739
VVI+D+ + + A VT
Sbjct: 155 VVIADSASVLQAFDAVVT 172
Score = 79.0 bits (186), Expect = 4e-15
Identities = 42/86 (48%), Positives = 46/86 (53%)
Frame = +3
Query: 249 EDGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXX 428
E G G IV+ L VPKT ENF L +G GYKGS FHRVI FM Q
Sbjct: 10 EIGGAPAGRIVMELRDDVVPKTAENFRALCTGEKGFGYKGSSFHRVIPGFMCQGGDFTRG 69
Query: 429 XXXXXRSIYGERFEDENFKLKHYGAG 506
+SIYG +F DENF LKH G G
Sbjct: 70 DGTGGKSIYGAKFADENFNLKHTGPG 95
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 84.6 bits (200), Expect = 8e-17
Identities = 39/49 (79%), Positives = 45/49 (91%)
Frame = +2
Query: 506 LLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMT 652
LLSMAN+G +TNGSQFFITTV TP LDGRHVVFGKVL+GMDVV+++E T
Sbjct: 194 LLSMANSGPNTNGSQFFITTVPTPHLDGRHVVFGKVLKGMDVVRELEAT 242
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 84.2 bits (199), Expect = 1e-16
Identities = 40/65 (61%), Positives = 50/65 (76%)
Frame = +2
Query: 506 LLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 685
+LSMAN+G +TNGSQFF+TT KT WLDG+HVVFG V+EG DVV+K+E V + + K
Sbjct: 230 VLSMANSGPNTNGSQFFLTTEKTDWLDGKHVVFGNVIEGFDVVRKME-AVGSQSGKASKK 288
Query: 686 VVISD 700
VVI D
Sbjct: 289 VVIDD 293
Score = 81.4 bits (192), Expect = 7e-16
Identities = 41/84 (48%), Positives = 48/84 (57%)
Frame = +3
Query: 255 GDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXX 434
G+ + G IV+ L VP T ENF L +G GYKGS FHR+I FM Q
Sbjct: 146 GERSAGRIVMELRSDVVPMTAENFRCLCTHEKGFGYKGSSFHRIIPQFMCQGGDFTKHNG 205
Query: 435 XXXRSIYGERFEDENFKLKHYGAG 506
+SIYG +FEDENF LKH GAG
Sbjct: 206 TGGKSIYGAKFEDENFVLKHTGAG 229
>SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05)
Length = 49
Score = 76.2 bits (179), Expect = 3e-14
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = +2
Query: 506 LLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 643
+LSMANAG TNGSQFF+ T KT WLDG+HVVFG V +GMDVV+K+
Sbjct: 2 ILSMANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGMDVVKKM 47
>SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24)
Length = 145
Score = 63.7 bits (148), Expect = 2e-10
Identities = 28/65 (43%), Positives = 45/65 (69%)
Frame = +2
Query: 506 LLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 685
++ MAN G+ TNGSQF+IT PW+D ++V FG+V+EG++V+ +E T N+RP +
Sbjct: 71 VVGMANKGRHTNGSQFYITLQPAPWMDTKYVAFGQVIEGLNVLDVLEGQET-FNERPKVE 129
Query: 686 VVISD 700
++D
Sbjct: 130 CRVAD 134
>SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23)
Length = 378
Score = 54.8 bits (126), Expect = 7e-08
Identities = 31/65 (47%), Positives = 41/65 (63%)
Frame = +2
Query: 506 LLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 685
LLSMAN G +TNGSQFFI HVVFG V++G ++V++IE T +RP D
Sbjct: 51 LLSMANRGPNTNGSQFFII----------HVVFGHVIQGEELVRQIESLPTNEKNRPNAD 100
Query: 686 VVISD 700
V +S+
Sbjct: 101 VKVSN 105
>SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +2
Query: 509 LSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVL 616
+SMAN G ++NGSQFFI K P LD ++ +FGK L
Sbjct: 307 VSMANNGPNSNGSQFFICYGKQPHLDMKYTMFGKYL 342
>SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2)
Length = 175
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +2
Query: 593 HVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISD 700
HVVFG V++G ++V++IE T +RP DV +S+
Sbjct: 3 HVVFGHVIQGEELVRQIESLPTNEKNRPNADVKVSN 38
>SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 35.5 bits (78), Expect = 0.046
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Frame = +2
Query: 509 LSMANAG-KDTNGSQFFITTVKTPWLDGR-----HVVFGKVLEGMDVVQKIEMTVT 658
L+MA +D+ SQFFI +LD + VFGKV++GMDVV KI T
Sbjct: 107 LAMARTQVRDSATSQFFINHKDNAFLDHGSRDFGYAVFGKVVKGMDVVDKIAQVPT 162
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +3
Query: 264 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 407
++G I I L P +T NF LA G Y G++FHRVI FM+Q
Sbjct: 31 SLGEIEIELDADKAPISTANF--LAYVDSGY-YAGTQFHRVIPGFMVQ 75
>SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06)
Length = 454
Score = 34.7 bits (76), Expect = 0.080
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +3
Query: 264 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIK 392
++G I I L+GK PK NF QL EG Y + FHR++K
Sbjct: 11 SVGDIDIELWGKETPKACRNFIQLCL--EGY-YDNTIFHRIVK 50
>SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11)
Length = 48
Score = 31.9 bits (69), Expect = 0.56
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 8/46 (17%)
Frame = +3
Query: 270 GTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHR 383
G ++ LF VPKT ENF L +G G YKG FHR
Sbjct: 2 GRVLFELFADKVPKTAENFRALCTGEKGIGPSTGKPLHYKGCPFHR 47
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 5/100 (5%)
Frame = -2
Query: 693 MTTSLTGRSFAPVTVISIFCTTSIPSKTLPKTTCLPSNQGVLTVVMK-N*DPFVSLPALA 517
++T +T + +I I TTS T + +N + +++ +++P+ +
Sbjct: 144 ISTKITTSTTTTFIIIIIIITTSSHHCRSSTTIVVTTNNTITIIIITITSTTIITMPSPS 203
Query: 516 I----DNNQHHSASA*SFHLQNVHHIYCALQFHHPW*NHH 409
I ++QHH H N HH + HH HH
Sbjct: 204 IVIYRRHHQHHQHHHHHHHQHNHHHHHHNHHHHHHHHYHH 243
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -2
Query: 690 TTSLTGRSFAPVTVISIFCTTSIP-SKTLPKTTCLPSNQGV 571
TTS+ + AP T S+ TT+ P + TLPKTT P V
Sbjct: 2835 TTSVPKTTAAPETT-SVPKTTAAPETTTLPKTTAAPETTSV 2874
>SB_32386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 227 VTLGPLGISSDLALAMNNKIPKAIVRVPMIKTSL 126
VTL PL +S+ ++N + A+VRV I SL
Sbjct: 38 VTLSPLQVSAKTGASLNGRAEVAMVRVSPILASL 71
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,583,535
Number of Sequences: 59808
Number of extensions: 439324
Number of successful extensions: 942
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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