Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0486
(745 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 96 2e-20
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 96 3e-20
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 92 3e-19
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 91 9e-19
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 91 9e-19
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 89 2e-18
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 89 3e-18
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 83 2e-16
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 82 3e-16
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 79 3e-15
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 79 3e-15
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 79 4e-15
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 78 5e-15
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 78 7e-15
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 77 1e-14
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 75 7e-14
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 75 7e-14
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 74 9e-14
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 54 8e-08
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 54 1e-07
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 53 2e-07
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 50 1e-06
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 47 2e-05
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 44 1e-04
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 40 0.002
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 40 0.002
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 40 0.002
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 39 0.004
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 38 0.005
At1g26940.1 68414.m03284 peptidyl-prolyl cis-trans isomerase cyc... 31 0.61
At3g02610.1 68416.m00252 acyl-[acyl-carrier-protein] desaturase,... 30 1.4
At1g04600.1 68414.m00454 myosin, putative similar to myosin (GI:... 28 5.7
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 96.3 bits (229), Expect = 2e-20
Identities = 45/65 (69%), Positives = 53/65 (81%)
Frame = +2
Query: 506 LLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 685
+LSMANAG +TNGSQFFI T+KT WLDGRHVVFG+V+EGM+VV+ IE T DRP K
Sbjct: 186 VLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKK 245
Query: 686 VVISD 700
VVI+D
Sbjct: 246 VVIAD 250
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/79 (53%), Positives = 50/79 (63%)
Frame = +3
Query: 270 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 449
G IVIGL+G VP+T ENF L +G GYKGS FHRVI++FMIQ +S
Sbjct: 107 GRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDFMIQGGDFEKGNGTGGKS 166
Query: 450 IYGERFEDENFKLKHYGAG 506
+YG F+DENFKL H G G
Sbjct: 167 VYGRTFKDENFKLSHVGPG 185
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 95.9 bits (228), Expect = 3e-20
Identities = 44/62 (70%), Positives = 50/62 (80%)
Frame = +2
Query: 509 LSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDV 688
LSMANAG +TNGSQFFITTV TPWLD +H VFG+V++GMDVVQ IE T NDRP +DV
Sbjct: 562 LSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVVQGIEKVKTDKNDRPYQDV 621
Query: 689 VI 694
I
Sbjct: 622 KI 623
Score = 41.9 bits (94), Expect = 4e-04
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 267 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXR 446
+G I + L+ + PKT ENF + Y FHRVI+ FMIQ +
Sbjct: 484 LGDIHMKLYPEECPKTVENFTTHCRNGY---YDNHLFHRVIRGFMIQ-TGDPLGDGTGGQ 539
Query: 447 SIYGERFEDENFK-LKH 494
SI+G FEDE K L+H
Sbjct: 540 SIWGREFEDEFHKSLRH 556
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 92.3 bits (219), Expect = 3e-19
Identities = 46/86 (53%), Positives = 53/86 (61%)
Frame = +3
Query: 249 EDGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXX 428
E G + G IV+GLFG+ VPKT ENF L + GYKGS FHR+IK+FMIQ
Sbjct: 102 EIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEG 161
Query: 429 XXXXXRSIYGERFEDENFKLKHYGAG 506
SIYG +FEDENF LKH G G
Sbjct: 162 NGTGGISIYGAKFEDENFTLKHTGPG 187
Score = 81.4 bits (192), Expect = 6e-16
Identities = 38/59 (64%), Positives = 46/59 (77%)
Frame = +2
Query: 506 LLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVK 682
+LSMANAG +TNGSQFFI TVKT WLD +HVVFG+V+EGM +V+ +E T A D P K
Sbjct: 188 ILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQETRAFDVPKK 246
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 90.6 bits (215), Expect = 9e-19
Identities = 42/65 (64%), Positives = 54/65 (83%)
Frame = +2
Query: 506 LLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 685
+LSMANAG +TNGSQFFI TVKT WLDG+HVVFG+V+EG+DVV+ IE V ++ +P K
Sbjct: 104 ILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIE-KVGSSSGKPTKP 162
Query: 686 VVISD 700
VV++D
Sbjct: 163 VVVAD 167
Score = 70.9 bits (166), Expect = 8e-13
Identities = 39/86 (45%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Frame = +3
Query: 270 GTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXX 428
G IV+ L+ P+T ENF L +G G +KGSKFHRVI NFM Q
Sbjct: 18 GRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAG 77
Query: 429 XXXXXRSIYGERFEDENFKLKHYGAG 506
SIYG +FEDENF+ KH G G
Sbjct: 78 NGTGGESIYGSKFEDENFERKHTGPG 103
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 90.6 bits (215), Expect = 9e-19
Identities = 42/65 (64%), Positives = 54/65 (83%)
Frame = +2
Query: 506 LLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 685
+LSMANAG +TNGSQFFI TVKT WLDG+HVVFG+V+EG+DVV+ IE + ++ +P K
Sbjct: 105 ILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIE-KIGSSSGKPTKP 163
Query: 686 VVISD 700
VVI+D
Sbjct: 164 VVIAD 168
Score = 69.7 bits (163), Expect = 2e-12
Identities = 39/86 (45%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Frame = +3
Query: 270 GTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXX 428
G IV+ L+ PKT ENF L +G G +KGS FHRVI NFM Q
Sbjct: 19 GKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKG 78
Query: 429 XXXXXRSIYGERFEDENFKLKHYGAG 506
SIYG +FEDENF+ KH G G
Sbjct: 79 NGTGGESIYGAKFEDENFERKHTGPG 104
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 89.4 bits (212), Expect = 2e-18
Identities = 44/66 (66%), Positives = 52/66 (78%)
Frame = +2
Query: 506 LLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 685
+LSMAN+G+DTNGSQFFITTV T WLDGRHVVFGKV++GMDVV KIE + P
Sbjct: 132 VLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIE-AEGKQSGTPKSK 190
Query: 686 VVISDT 703
VVI+D+
Sbjct: 191 VVIADS 196
Score = 88.6 bits (210), Expect = 4e-18
Identities = 46/86 (53%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
Frame = +3
Query: 270 GTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXX 428
G +VIGLFGK VPKT ENF L +G G YKGSKFHR+I +FMIQ
Sbjct: 46 GRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHG 105
Query: 429 XXXXXRSIYGERFEDENFKLKHYGAG 506
SIYG++F DENFKLKH G G
Sbjct: 106 NGMGGESIYGQKFADENFKLKHTGPG 131
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 89.0 bits (211), Expect = 3e-18
Identities = 51/103 (49%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Frame = +3
Query: 270 GTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXX 428
G IV+GLFGKTVPKT ENF L +G G YKGS FHR+I +FM+Q
Sbjct: 49 GRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHG 108
Query: 429 XXXXXRSIYGERFEDENFKLKHYGAGCYLWLMQAKTQMDLNFS 557
SIYGE+F DENFKLKH G G +L A D N S
Sbjct: 109 NGMGGESIYGEKFADENFKLKHTGPG---FLSMANAGQDTNGS 148
Score = 88.2 bits (209), Expect = 5e-18
Identities = 44/65 (67%), Positives = 49/65 (75%)
Frame = +2
Query: 509 LSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDV 688
LSMANAG+DTNGSQFFITTV T WLDGRHVVFGKV+ GMDVV K+E + P V
Sbjct: 136 LSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVE-AEGNQSGTPKSKV 194
Query: 689 VISDT 703
VI D+
Sbjct: 195 VIVDS 199
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 82.6 bits (195), Expect = 2e-16
Identities = 41/65 (63%), Positives = 51/65 (78%)
Frame = +2
Query: 506 LLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 685
+LSMANAG +TNGSQFFI T KT WLDG+HVVFG+V+EG++VV+ IE V + R K
Sbjct: 105 ILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIE-KVGSDSGRTSKP 163
Query: 686 VVISD 700
VVI+D
Sbjct: 164 VVIAD 168
Score = 68.5 bits (160), Expect = 4e-12
Identities = 39/91 (42%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Frame = +3
Query: 255 GDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXX 413
G + G IV+ L+ T P+T ENF L G G YKGS FHRVI FM Q
Sbjct: 14 GGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGG 73
Query: 414 XXXXXXXXXXRSIYGERFEDENFKLKHYGAG 506
SIYG +F+DENF KH G G
Sbjct: 74 DFTAGNGTGGESIYGSKFKDENFIKKHTGPG 104
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 82.2 bits (194), Expect = 3e-16
Identities = 48/103 (46%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Frame = +3
Query: 270 GTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXX 428
G I+IGLFG VPKT ENF L +G G +KGS FHR+I FMIQ
Sbjct: 73 GRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFHRIIPGFMIQGGDFTRG 132
Query: 429 XXXXXRSIYGERFEDENFKLKHYGAGCYLWLMQAKTQMDLNFS 557
SIYG++F DENFKLKH G G +L A + D N S
Sbjct: 133 DGRGGESIYGDKFADENFKLKHTGPG---FLSMANSGPDSNGS 172
Score = 82.2 bits (194), Expect = 3e-16
Identities = 37/46 (80%), Positives = 41/46 (89%)
Frame = +2
Query: 509 LSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE 646
LSMAN+G D+NGSQFFITTV T WLDG HVVFGKVL GM+VV+KIE
Sbjct: 160 LSMANSGPDSNGSQFFITTVTTSWLDGHHVVFGKVLSGMEVVRKIE 205
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 79.0 bits (186), Expect = 3e-15
Identities = 37/66 (56%), Positives = 48/66 (72%)
Frame = +2
Query: 506 LLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 685
+++MAN G D+NGSQFFITTVK WL+G HVV GKV++GMD V IE + +P K
Sbjct: 147 MVAMANTGPDSNGSQFFITTVKASWLEGEHVVLGKVIQGMDNVFAIEGGAGTYSGKPRKK 206
Query: 686 VVISDT 703
VVI+D+
Sbjct: 207 VVIADS 212
Score = 72.1 bits (169), Expect = 4e-13
Identities = 41/92 (44%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Frame = +3
Query: 252 DGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQX 410
DG +G IVIGL+G VPKT ENF L +G+ YKG+ FHR+I F+IQ
Sbjct: 56 DGQ-RLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRIISGFVIQG 114
Query: 411 XXXXXXXXXXXRSIYGERFEDENFKLKHYGAG 506
SIYG F DENFK++H AG
Sbjct: 115 GDIIHGDGKSSDSIYGGTFPDENFKIQHSHAG 146
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 79.0 bits (186), Expect = 3e-15
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = +2
Query: 506 LLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 685
+LSMAN+G +TNGSQFFITT +T LDG+HVVFG+V +GM VV+ IE P +D
Sbjct: 105 MLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVSIEEQSCPSQD 164
Query: 686 VVISD 700
VVI D
Sbjct: 165 VVIHD 169
Score = 72.5 bits (170), Expect = 3e-13
Identities = 42/92 (45%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Frame = +3
Query: 255 GDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVIKNFMIQX 410
G + G IVI L+ VPKT ENF L +G G YKG++FHRVIK FMIQ
Sbjct: 13 GGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRVIKGFMIQG 72
Query: 411 XXXXXXXXXXXRSIYGERFEDENFKLKHYGAG 506
SIYG +F+DENF+LKH G
Sbjct: 73 GDISANDGTGGESIYGLKFDDENFELKHERKG 104
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 78.6 bits (185), Expect = 4e-15
Identities = 35/67 (52%), Positives = 47/67 (70%)
Frame = +2
Query: 506 LLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 685
+LSMANAG +TNGSQFFIT P LDG+H +FG+V GM+V++++ T DRP+ +
Sbjct: 95 ILSMANAGPNTNGSQFFITLAPQPSLDGKHTIFGRVCRGMEVIKRLGSVQTDNTDRPIHE 154
Query: 686 VVISDTK 706
V I TK
Sbjct: 155 VKILRTK 161
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +3
Query: 258 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 437
+ ++G + ++ K P+T NF +L+++ Y FHR++K+F++Q
Sbjct: 15 ETSMGPFTVEMYYKHSPRTCRNFLELSRRGY---YDNVLFHRIVKDFIVQ-GGDPTGTGR 70
Query: 438 XXRSIYGERFEDE-NFKLKHYGAG 506
SIYG +FEDE N +LKH GAG
Sbjct: 71 GGESIYGSKFEDEINKELKHTGAG 94
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 78.2 bits (184), Expect = 5e-15
Identities = 38/66 (57%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Frame = +2
Query: 506 LLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVL-EGMDVVQKIEMTVTGANDRPVK 682
LLSMAN+G +TNG QFFIT K WLD +HVVFG+VL +G+ V++KIE G N+RP
Sbjct: 130 LLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVMRKIENVAIGPNNRPKL 189
Query: 683 DVVISD 700
VVI++
Sbjct: 190 AVVITE 195
Score = 68.5 bits (160), Expect = 4e-12
Identities = 38/84 (45%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Frame = +3
Query: 270 GTIVIGLFGKTVPKTTENFFQLAQ---KPEGE--GYKGSKFHRVIKNFMIQXXXXXXXXX 434
G I + LF PKT ENF Q + G+ GYK +FHRVIK+FM+Q
Sbjct: 46 GRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKECQFHRVIKDFMVQSGDFLKNDG 105
Query: 435 XXXRSIYGERFEDENFKLKHYGAG 506
SIYG +FEDENF KH G G
Sbjct: 106 SGCMSIYGHKFEDENFTAKHTGPG 129
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 77.8 bits (183), Expect = 7e-15
Identities = 38/65 (58%), Positives = 50/65 (76%)
Frame = +2
Query: 506 LLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 685
+LSMAN+G +TNGSQFFI T KT WLDG+HVVFG+V++G+DVV+ IE V + + K
Sbjct: 104 ILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIE-KVGSDSGKTSKV 162
Query: 686 VVISD 700
V I+D
Sbjct: 163 VTITD 167
Score = 66.5 bits (155), Expect = 2e-11
Identities = 39/87 (44%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Frame = +3
Query: 267 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXX 425
IG I + LF T P T ENF L +G G +KGS FHRVI FM Q
Sbjct: 17 IGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTA 76
Query: 426 XXXXXXRSIYGERFEDENFKLKHYGAG 506
SIYG +F+DENF KH GAG
Sbjct: 77 KNGTGGESIYGAKFKDENFIKKHTGAG 103
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 77.0 bits (181), Expect = 1e-14
Identities = 38/65 (58%), Positives = 48/65 (73%)
Frame = +2
Query: 506 LLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 685
+LSMAN+G +TNGSQFFI T KT WLDG+HVVFGKV++G +VV+ +E V P +
Sbjct: 104 ILSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAME-DVGSDMGNPSER 162
Query: 686 VVISD 700
VVI D
Sbjct: 163 VVIED 167
Score = 70.9 bits (166), Expect = 8e-13
Identities = 39/91 (42%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Frame = +3
Query: 255 GDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXX 413
G G +V+ LF P+T NF L G G YKGS FHR+I FM Q
Sbjct: 13 GKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGG 72
Query: 414 XXXXXXXXXXRSIYGERFEDENFKLKHYGAG 506
SIYG +FEDENFKLKH G G
Sbjct: 73 DFTRGNGTGGESIYGSKFEDENFKLKHTGPG 103
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 74.5 bits (175), Expect = 7e-14
Identities = 43/92 (46%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Frame = +3
Query: 255 GDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVIKNFMIQX 410
G D + IVI LF VPKT ENF L G G +KGS FHRVIK FM Q
Sbjct: 16 GGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSSFHRVIKGFMAQG 75
Query: 411 XXXXXXXXXXXRSIYGERFEDENFKLKHYGAG 506
SIYG +F DENF+L H GAG
Sbjct: 76 GDFSNGNGTGGESIYGGKFSDENFRLDHDGAG 107
Score = 74.1 bits (174), Expect = 9e-14
Identities = 36/65 (55%), Positives = 48/65 (73%)
Frame = +2
Query: 506 LLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 685
+LSMAN G +TNGSQFFI + P LDG+HVVFGKV+EGM V++K+E+ T ++ +P
Sbjct: 108 VLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGT-SDGKPTSP 166
Query: 686 VVISD 700
V I D
Sbjct: 167 VKIID 171
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 74.5 bits (175), Expect = 7e-14
Identities = 43/92 (46%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Frame = +3
Query: 255 GDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVIKNFMIQX 410
G D + IVI LF VPKT ENF L G G +KGS FHRVIK FM Q
Sbjct: 16 GGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSSFHRVIKGFMAQG 75
Query: 411 XXXXXXXXXXXRSIYGERFEDENFKLKHYGAG 506
SIYG +F DENF+L H GAG
Sbjct: 76 GDFSNGNGTGGESIYGGKFSDENFRLDHDGAG 107
Score = 74.1 bits (174), Expect = 9e-14
Identities = 36/65 (55%), Positives = 48/65 (73%)
Frame = +2
Query: 506 LLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 685
+LSMAN G +TNGSQFFI + P LDG+HVVFGKV+EGM V++K+E+ T ++ +P
Sbjct: 108 VLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGT-SDGKPTSP 166
Query: 686 VVISD 700
V I D
Sbjct: 167 VKIID 171
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 74.1 bits (174), Expect = 9e-14
Identities = 32/61 (52%), Positives = 45/61 (73%)
Frame = +2
Query: 506 LLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 685
+LSMAN+G +TNGSQFFIT K P L+G + +FGKV+ G +V+ +E T TG DRP+ +
Sbjct: 86 MLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFGKVIHGFEVLDIMEKTQTGPGDRPLAE 145
Query: 686 V 688
+
Sbjct: 146 I 146
Score = 46.8 bits (106), Expect = 2e-05
Identities = 32/82 (39%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 264 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 443
N+G I +F VPK+ ENF L Y G+ FHR IK FMIQ
Sbjct: 8 NLGDIKCEIFCDEVPKSAENFLALCASGY---YDGTIFHRNIKGFMIQ-GGDPKGTGKGG 63
Query: 444 RSIYGERFEDE-NFKLKHYGAG 506
SI+G++F DE LKH G
Sbjct: 64 TSIWGKKFNDEIRDSLKHNARG 85
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 54.4 bits (125), Expect = 8e-08
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 509 LSMANAGKDTNGSQFFITTVKT-PWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 685
++MA+ G++ N SQF+ T +LDG+H VFG++ EG D + +I +RP K+
Sbjct: 94 VAMASGGENLNASQFYFTLRDDLDYLDGKHTVFGQIAEGFDTLTRINEAYVDPKNRPYKN 153
Query: 686 VVISDTKTEVVAEPF 730
+ I T ++ +PF
Sbjct: 154 IRIK--HTHILDDPF 166
Score = 31.5 bits (68), Expect = 0.61
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Frame = +3
Query: 264 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ---XXXXXXXXX 434
++G IVI L P T +NF +L + + Y G FH V K+F Q
Sbjct: 8 SLGDIVIDLHSDKCPLTCKNFLKLCKI---KYYNGCLFHTVQKDFTAQTGDPTGTGAGGD 64
Query: 435 XXXRSIYGER---FEDE-NFKLKHYGAG 506
+ +YGE+ ++DE + LKH G
Sbjct: 65 SIYKFLYGEQARFYKDEIHLDLKHSKTG 92
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +2
Query: 506 LLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 685
++SMAN+G TNGSQFF+ L+ +H VFG V+ G+ + +E +DRP+++
Sbjct: 429 VVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAMENVPVDESDRPLEE 488
Query: 686 VVISDTKTEVVAEPFSVTKE 745
+ I + V P++ E
Sbjct: 489 IKI--IEASVFVNPYTELDE 506
Score = 46.0 bits (104), Expect = 3e-05
Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +3
Query: 270 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 449
G + I L P+ ENF L ++ Y G FHR I+NFMIQ S
Sbjct: 353 GDLNIELHCDIAPRACENFITLCERGY---YNGVAFHRSIRNFMIQ-GGDPTGTGKGGES 408
Query: 450 IYGERFEDE-NFKLKHYGAG 506
I+G+ F+DE N KL H G G
Sbjct: 409 IWGKPFKDEPNSKLLHSGRG 428
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 52.8 bits (121), Expect = 2e-07
Identities = 35/93 (37%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Frame = +3
Query: 252 DGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVIKNFMIQ 407
DGD T+V LF + PKT+ENF L +G G YKGS FHR++K Q
Sbjct: 16 DGDP-AETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGSFFHRIMKGSSAQ 74
Query: 408 XXXXXXXXXXXXRSIYGERFEDENFKLKHYGAG 506
SIY +F DE+ KL+H G
Sbjct: 75 AGDFVNRNGTAGESIYAGKFPDESPKLRHEETG 107
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +2
Query: 506 LLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE 646
LLSM+ A +D GS F IT LD +VVFGK+++G ++++KIE
Sbjct: 108 LLSMSIADRDKFGSHFHITFRPNQQLDRNNVVFGKLIQGKEILKKIE 154
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Frame = +2
Query: 506 LLSMANAGK-DTNGSQFFITTVKTPWLDGRHVVFGKVL-EGMDVVQKIEMTVTGANDRPV 679
+++MANA ++NGSQFF T K WLD +H +FGKV + + + ++ T +DRP+
Sbjct: 98 IVAMANASSPNSNGSQFFFTLDKCDWLDKKHTIFGKVTGDSIYNLLRLGEVDTSKDDRPL 157
Query: 680 KDVVISDTKTEVVAEPF 730
D EV+ PF
Sbjct: 158 -DPAPKILSVEVLWNPF 173
Score = 37.5 bits (83), Expect = 0.009
Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 270 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGY-KGSKFHRVIKNFMIQXXXXXXXXXXXXR 446
G I + L+ K PK+ NF QL EGY + FHRVI F++Q
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL----EGYFDNTIFHRVIPGFLVQGGDPTGSGTGGD- 76
Query: 447 SIYGERFEDE 476
SIYG F DE
Sbjct: 77 SIYGGVFADE 86
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Frame = +2
Query: 533 DTNGSQFFITTVKTPW-LDGRHVVFGKVLEGMDVVQKIEMTVTGANDR-PVKDVVISD 700
D+NGSQF I +DG HVV GKV+EG+D+++ IE V R P K VVI+D
Sbjct: 106 DSNGSQFQIHMKDYGLQVDGDHVVIGKVVEGLDLMRNIEKEVITTTTRTPSKPVVIAD 163
Score = 36.7 bits (81), Expect = 0.016
Identities = 27/82 (32%), Positives = 33/82 (40%), Gaps = 7/82 (8%)
Frame = +3
Query: 270 GTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXX 428
G IVI LF P+T ENF L G G YKGS F ++ + M
Sbjct: 18 GRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTFDHIVPDLM----WCGGD 73
Query: 429 XXXXXRSIYGERFEDENFKLKH 494
I+ E +DE F L H
Sbjct: 74 IIFENEPIHSEELDDEYFILNH 95
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/66 (46%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Frame = +2
Query: 539 NGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE--MTVTGANDRPVKDV--VISDTK 706
NG++F IT V +P L+ +V GKVLEGM VV+K+ TV P V VI D K
Sbjct: 230 NGTEFVITAVDSPELEDSVLVIGKVLEGMGVVEKMREVKTVRDNTSSPYFRVAKVIGD-K 288
Query: 707 TEVVAE 724
VVAE
Sbjct: 289 RAVVAE 294
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 252 DGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFM 401
DG+ IG I+IGL+G VP T F + G Y+ F +++ ++
Sbjct: 101 DGEP-IGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGYV 149
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +2
Query: 548 QFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVIS 697
+ ITT P L+ + +VFG+VL+G DVVQ+IE T + +P + I+
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIEEVDTDEHFQPKSPIGIT 228
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +3
Query: 270 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 407
G I + LF + P+ + F L QK + +KG F RVIKN+++Q
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQ 132
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +2
Query: 548 QFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVIS 697
+ ITT P L+ + +VFG+VL+G DVVQ+IE T + +P + I+
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIEEVDTDEHFQPKSPIGIT 228
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +3
Query: 270 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 407
G I + LF + P+ + F L QK + +KG F RVIKN+++Q
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQ 132
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +2
Query: 548 QFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVIS 697
+ ITT P L+ + +VFG+VL+G DVVQ+IE T + +P + I+
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIEEVDTDEHFQPKSPIGIT 228
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +3
Query: 270 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 407
G I + LF + P+ + F L QK + +KG F RVIKN+++Q
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQ 132
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +2
Query: 503 WLLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVK 682
+++ A + G +FFI + + L+ + VFG+V +G DVVQ+IE T +P
Sbjct: 158 FMVGTPKAKNEQGGFEFFIVSAQIKDLNEKLTVFGRVSKGQDVVQEIEEVETDDQYQPKS 217
Query: 683 DVVI 694
+ I
Sbjct: 218 PIEI 221
Score = 36.3 bits (80), Expect = 0.021
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 258 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGY-KGSKFHRVIKNFMIQ 407
D G++ I LF T P + F + Q +GY KG F RV+K+F+IQ
Sbjct: 83 DTGKGSVTIELFKDTAPNVVDQFMKFCQ----DGYFKGFLFSRVVKHFVIQ 129
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 533 DTNGSQFFITTVK--TPWLDGRHVVFGKVLEGMDVVQKIEMTVT 658
D +F ITT +P LDG ++VFG VLEG+DVV I T
Sbjct: 191 DYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISSIPT 234
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 267 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRV 386
+G +V+GL+G+ VP T F ++ YK + H++
Sbjct: 85 LGRVVLGLYGRHVPITVSTFKRMCTS-SSTSYKNTPVHKI 123
>At1g26940.1 68414.m03284 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 226
Score = 31.5 bits (68), Expect = 0.61
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = +2
Query: 545 SQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVT---GANDRPVKDVVI-----SD 700
S F + P LD ++ VFGKV +G + + K+E T G P + + I D
Sbjct: 134 SSFSMLLGNAPHLDRQYAVFGKVTKGDETLSKLEEVPTRREGIFVMPTERITILSTYYYD 193
Query: 701 TKTEVVAEPFSVTK 742
TK E E SV K
Sbjct: 194 TKMESCEEERSVLK 207
>At3g02610.1 68416.m00252 acyl-[acyl-carrier-protein] desaturase,
putative / stearoyl-ACP desaturase, putative similar to
Acyl-[acyl-carrier protein] desaturase from Spinacia
oleracea SP|P28645, Cucumis sativus SP|P32061, Ricinus
communis SP|P22337; contains Pfam profile PF03405 Fatty
acid desaturase
Length = 411
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -2
Query: 744 SFVTLKGSATTSVFVSDMTTSLTGRSFAPVTVISIFCTTSIPSKTLPKT 598
S +T+ V VS T+ G SF+P ++ + C + PSKT +T
Sbjct: 7 STITVAMKQNPLVAVSFPRTTCLGSSFSPPRLLRVSCVATNPSKTSEET 55
>At1g04600.1 68414.m00454 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1730
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Frame = -1
Query: 703 RVRYDNIFDWAIIRTRNS--------HLNFLYNIHSF*NFTENNMSAI*PGCLNSCDEKL 548
++ Y +FDW + + NS H+ + +I+ F +F N+ C+N +EKL
Sbjct: 401 KIVYSKLFDWLVTKINNSIGQDPNSKHIIGVLDIYGFESFKTNSFEQF---CINLTNEKL 457
Query: 547 R 545
+
Sbjct: 458 Q 458
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,476,657
Number of Sequences: 28952
Number of extensions: 315072
Number of successful extensions: 771
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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