Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0485
         (703 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7ZZC0 Cluster: Follicle-stimulating hormone receptor; ...    36   0.73 
UniRef50_Q057S7 Cluster: Outer membrane protein; n=1; Buchnera a...    36   1.3  
UniRef50_Q8VVN5 Cluster: Putative uncharacterized protein; n=2; ...    33   5.1  
UniRef50_Q5DF61 Cluster: SJCHGC05490 protein; n=1; Schistosoma j...    33   5.1  
UniRef50_A4W137 Cluster: Putative asparagine synthetase; n=2; St...    33   9.0  

>UniRef50_Q7ZZC0 Cluster: Follicle-stimulating hormone receptor;
           n=20; Clupeocephala|Rep: Follicle-stimulating hormone
           receptor - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 668

 Score = 36.3 bits (80), Expect = 0.73
 Identities = 20/58 (34%), Positives = 30/58 (51%)
 Frame = +1

Query: 439 RLVDKLLRMINCYAFSHLNIDFIIQNGTPKISIIHQY*FKGYPPPVYRHISSTVPYTI 612
           RL    +R I+ +AF+   I  +   G  +++ IH Y FKG   PV   IS T  +T+
Sbjct: 184 RLTKNGIREIDSHAFNGTKIGKLFLMGNQQLNHIHSYAFKGAEGPVVLDISRTAVHTL 241


>UniRef50_Q057S7 Cluster: Outer membrane protein; n=1; Buchnera
           aphidicola str. Cc (Cinara cedri)|Rep: Outer membrane
           protein - Buchnera aphidicola subsp. Cinara cedri
          Length = 571

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
 Frame = +2

Query: 122 NKYMYESNKEEYKLIHNHIK*KKSHFIFVNQFSLKHNIITPTFRTFMRKR--SEYFFLDI 295
           N ++Y++ K+  KL +N+I   K++F  +N+F+          + F  K+  +E FFL+ 
Sbjct: 56  NFHLYKNKKKILKL-NNYINFSKNNFFSLNKFNF--------LKFFNNKKIVNEIFFLNY 106

Query: 296 LFQFSVKPCIITSRFKFN*CITLFLLFY**DFEKKKYIDNSRVALNK 436
              F +K  I  + F     I+L  LF+      KKY+ NS    NK
Sbjct: 107 FKNFYIKNNINNTIF-LKKIISLHKLFFFHKNHNKKYLSNSFFLKNK 152


>UniRef50_Q8VVN5 Cluster: Putative uncharacterized protein; n=2;
           Vibrio cholerae|Rep: Putative uncharacterized protein -
           Vibrio cholerae
          Length = 181

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = +3

Query: 471 LLCLFPFKYRFHNSKWYTKNLNNTPILIQRLPTSSLSSYQFHSPIYYYQNY 623
           LLC F F+YR H+ +WY+ N +  P ++        S+ + + P Y+ ++Y
Sbjct: 44  LLCFF-FRYRLHSQRWYSANASK-PYIVS-------SAMRLNGPFYFGKHY 85


>UniRef50_Q5DF61 Cluster: SJCHGC05490 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC05490 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 219

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 15/39 (38%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
 Frame = +3

Query: 498 RFHNSKWYTKNLNNTPILIQRLPTS--SLSSYQFHSPIY 608
           R H+++W+   L +T I++ +LP+S  S S+ +FHS +Y
Sbjct: 59  RLHSTQWFALLLLSTGIVLTQLPSSYQSKSNVEFHSNLY 97


>UniRef50_A4W137 Cluster: Putative asparagine synthetase; n=2;
           Streptococcus suis|Rep: Putative asparagine synthetase -
           Streptococcus suis (strain 98HAH33)
          Length = 581

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
 Frame = -3

Query: 530 IFGVPF*IMKSIFKWEKA*QLIILNSLS-TSLFCLE-LLESYQY-TFFFQNLISKIKEKV 360
           +FG+P+   ++I  WE+   +  LN L  T   CLE  + SY+  T  F  LI KIKE+ 
Sbjct: 132 VFGLPYYPFQTISLWEELVNIKPLNYLEITEKGCLEKKIPSYEVDTKDFNQLIIKIKEEF 191

Query: 359 L 357
           L
Sbjct: 192 L 192


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 628,117,454
Number of Sequences: 1657284
Number of extensions: 11899885
Number of successful extensions: 26082
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26075
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)