BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0485 (703 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q7ZZC0 Cluster: Follicle-stimulating hormone receptor; ... 36 0.73 UniRef50_Q057S7 Cluster: Outer membrane protein; n=1; Buchnera a... 36 1.3 UniRef50_Q8VVN5 Cluster: Putative uncharacterized protein; n=2; ... 33 5.1 UniRef50_Q5DF61 Cluster: SJCHGC05490 protein; n=1; Schistosoma j... 33 5.1 UniRef50_A4W137 Cluster: Putative asparagine synthetase; n=2; St... 33 9.0 >UniRef50_Q7ZZC0 Cluster: Follicle-stimulating hormone receptor; n=20; Clupeocephala|Rep: Follicle-stimulating hormone receptor - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 668 Score = 36.3 bits (80), Expect = 0.73 Identities = 20/58 (34%), Positives = 30/58 (51%) Frame = +1 Query: 439 RLVDKLLRMINCYAFSHLNIDFIIQNGTPKISIIHQY*FKGYPPPVYRHISSTVPYTI 612 RL +R I+ +AF+ I + G +++ IH Y FKG PV IS T +T+ Sbjct: 184 RLTKNGIREIDSHAFNGTKIGKLFLMGNQQLNHIHSYAFKGAEGPVVLDISRTAVHTL 241 >UniRef50_Q057S7 Cluster: Outer membrane protein; n=1; Buchnera aphidicola str. Cc (Cinara cedri)|Rep: Outer membrane protein - Buchnera aphidicola subsp. Cinara cedri Length = 571 Score = 35.5 bits (78), Expect = 1.3 Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 2/107 (1%) Frame = +2 Query: 122 NKYMYESNKEEYKLIHNHIK*KKSHFIFVNQFSLKHNIITPTFRTFMRKR--SEYFFLDI 295 N ++Y++ K+ KL +N+I K++F +N+F+ + F K+ +E FFL+ Sbjct: 56 NFHLYKNKKKILKL-NNYINFSKNNFFSLNKFNF--------LKFFNNKKIVNEIFFLNY 106 Query: 296 LFQFSVKPCIITSRFKFN*CITLFLLFY**DFEKKKYIDNSRVALNK 436 F +K I + F I+L LF+ KKY+ NS NK Sbjct: 107 FKNFYIKNNINNTIF-LKKIISLHKLFFFHKNHNKKYLSNSFFLKNK 152 >UniRef50_Q8VVN5 Cluster: Putative uncharacterized protein; n=2; Vibrio cholerae|Rep: Putative uncharacterized protein - Vibrio cholerae Length = 181 Score = 33.5 bits (73), Expect = 5.1 Identities = 16/51 (31%), Positives = 29/51 (56%) Frame = +3 Query: 471 LLCLFPFKYRFHNSKWYTKNLNNTPILIQRLPTSSLSSYQFHSPIYYYQNY 623 LLC F F+YR H+ +WY+ N + P ++ S+ + + P Y+ ++Y Sbjct: 44 LLCFF-FRYRLHSQRWYSANASK-PYIVS-------SAMRLNGPFYFGKHY 85 >UniRef50_Q5DF61 Cluster: SJCHGC05490 protein; n=1; Schistosoma japonicum|Rep: SJCHGC05490 protein - Schistosoma japonicum (Blood fluke) Length = 219 Score = 33.5 bits (73), Expect = 5.1 Identities = 15/39 (38%), Positives = 27/39 (69%), Gaps = 2/39 (5%) Frame = +3 Query: 498 RFHNSKWYTKNLNNTPILIQRLPTS--SLSSYQFHSPIY 608 R H+++W+ L +T I++ +LP+S S S+ +FHS +Y Sbjct: 59 RLHSTQWFALLLLSTGIVLTQLPSSYQSKSNVEFHSNLY 97 >UniRef50_A4W137 Cluster: Putative asparagine synthetase; n=2; Streptococcus suis|Rep: Putative asparagine synthetase - Streptococcus suis (strain 98HAH33) Length = 581 Score = 32.7 bits (71), Expect = 9.0 Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 3/61 (4%) Frame = -3 Query: 530 IFGVPF*IMKSIFKWEKA*QLIILNSLS-TSLFCLE-LLESYQY-TFFFQNLISKIKEKV 360 +FG+P+ ++I WE+ + LN L T CLE + SY+ T F LI KIKE+ Sbjct: 132 VFGLPYYPFQTISLWEELVNIKPLNYLEITEKGCLEKKIPSYEVDTKDFNQLIIKIKEEF 191 Query: 359 L 357 L Sbjct: 192 L 192 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 628,117,454 Number of Sequences: 1657284 Number of extensions: 11899885 Number of successful extensions: 26082 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 25134 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 26075 length of database: 575,637,011 effective HSP length: 98 effective length of database: 413,223,179 effective search space used: 55785129165 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -