Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0485
         (703 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0318 - 17457182-17462232,17462745-17462955,17463356-174634...    28   6.2  
11_02_0033 + 7574845-7575004,7575370-7575429,7575582-7575623,757...    28   8.3  
11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,361...    28   8.3  
05_05_0331 + 24142484-24143548                                         28   8.3  

>12_02_0318 - 17457182-17462232,17462745-17462955,17463356-17463403,
            17466161-17466346
          Length = 1831

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +2

Query: 146  KEEYKLIHNHIK*KKSHFIFVNQFSLKHNIITPTFRTFMRKRSEY 280
            K E +L+  H+  K+++ + V+ FSL  + ITP     M K   Y
Sbjct: 1091 KPELELLGVHVAFKQNYQLLVDNFSLIRDQITPDVTILMLKCLRY 1135


>11_02_0033 +
           7574845-7575004,7575370-7575429,7575582-7575623,
           7576192-7576363,7577881-7577991,7578042-7578132
          Length = 211

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 489 MGKGIAVDHSQQFVNQPFLFRATRELSIYFFFSKSH 382
           +GKGIA D ++++ N   +F+    L I+F     H
Sbjct: 118 LGKGIAYDQNKRYSNVGTMFQEAPSLPIFFAMVVRH 153


>11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,
            3611984-3612217,3614113-3614138,3614446-3614633,
            3615707-3617670,3617938-3618423,3618527-3618894
          Length = 2207

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +3

Query: 456  VENDQLLCLFPFKYRFHNSKWYTKNLNNT 542
            VE ++LLC F  ++ +H+  +  K ++NT
Sbjct: 1252 VEMEELLCFFTVEHHYHSFAYNRKVIHNT 1280


>05_05_0331 + 24142484-24143548
          Length = 354

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 283 LFRYSFSILG*AMYNHLKIQ 342
           LF Y  + LG A YNH+K+Q
Sbjct: 298 LFGYGIAFLGVAYYNHVKLQ 317


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,433,800
Number of Sequences: 37544
Number of extensions: 274001
Number of successful extensions: 496
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 496
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)