Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0485
         (703 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   6.5  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   6.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   6.5  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   6.5  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    22   6.5  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   8.6  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 122 NKYMYESNKEEYKL 163
           +KYM E N  EYKL
Sbjct: 208 SKYMREYNDPEYKL 221


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +3

Query: 366 FFYFTNEILKKKSILITLE*L*TKKAG 446
           +F+F +E+L+K +  +    L TK +G
Sbjct: 168 YFFFNSEVLQKANHALIFGKLDTKTSG 194


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +3

Query: 366 FFYFTNEILKKKSILITLE*L*TKKAG 446
           +F+F +E+L+K +  +    L TK +G
Sbjct: 168 YFFFNSEVLQKANHALIFGKLDTKTSG 194


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 342 LNLEVIIHGLTEN*KRISKKKYSERLR 262
           + L  IIHGLT+   ++ K++Y    R
Sbjct: 245 IKLLEIIHGLTKKVIQLKKEEYKSGKR 271


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 89  AKYTRIS*KLINKYMYESNKEEYKLIHNHI 178
           +K  +I   L N Y Y +    YK +H +I
Sbjct: 309 SKEPKIISSLSNNYNYNNYNNNYKPLHYNI 338


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 489 FKYRFHNSKWYTKNLNN 539
           +KY ++N+ +   N NN
Sbjct: 329 YKYNYNNNNYNNNNYNN 345


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,604
Number of Sequences: 438
Number of extensions: 4504
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)