Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0483
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    27   0.11 
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    24   1.0  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    24   1.0  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   5.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   5.5  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   9.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -1

Query: 601 TCILLC*GP*PWPNPSRLRLGLRSSDHNEWWRYSYTGKAGRDKL 470
           TC +LC  P  WP P  ++L  R S   +  + S+    G  K+
Sbjct: 67  TCNMLCSEPAIWPKPVHIKLTNRESSIIDKTKISFNFSQGPVKI 110


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 537 FDQVITMNGGGTATRGRPEE 478
           FD+++ M+ G TA  G PEE
Sbjct: 287 FDKLLLMSEGRTAFLGSPEE 306


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 537 FDQVITMNGGGTATRGRPEE 478
           FD+++ M+ G TA  G PEE
Sbjct: 287 FDKLLLMSEGRTAFLGSPEE 306


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +2

Query: 266 VPLPYEKLTKNLEVVKKRLGREL 334
           V +P+E+  +NL++ + + G EL
Sbjct: 550 VTIPFERTFRNLDLNRPQGGEEL 572


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 384 CPLGSSK*EYRIFSDKVNSLPSLFLTTSKFF 292
           C L  S    ++F  K+    S+F+TT+ F+
Sbjct: 220 CNLTFSWYSKKVFYSKIIISGSIFMTTTSFY 250


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 373 PQRTGN*TRRKLSPPASRPCGHARRHC 453
           P+R  +  ++ L+P    P G   R+C
Sbjct: 411 PERFSDENKKNLTPYTYLPFGEGPRNC 437


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +2

Query: 371  DPKGQEIERGASYLRLRPDRVAMQDATAQMAMLQFIS 481
            D   QE+     YL+L P  +      A + ++QF++
Sbjct: 1308 DESTQEVHISKEYLQLEPIGLVFVFFFALILVIQFVA 1344


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +2

Query: 371  DPKGQEIERGASYLRLRPDRVAMQDATAQMAMLQFIS 481
            D   QE+     YL+L P  +      A + ++QF++
Sbjct: 1308 DESTQEVHISKEYLQLEPIGLVFVFFFALILVIQFVA 1344


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,334
Number of Sequences: 336
Number of extensions: 3689
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)