Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0483
         (697 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0607 - 11183382-11183387,11183481-11183637,11184220-111842...    31   0.87 
12_01_0173 - 1292164-1293036,1294063-1294098,1294195-1294334,129...    29   2.7  
02_04_0114 + 19879468-19880671,19882007-19882179,19882265-198826...    29   4.7  
02_04_0520 - 23628183-23628195,23629354-23630036                       28   6.2  
09_06_0251 - 21859484-21862162                                         28   8.1  

>09_02_0607 -
           11183382-11183387,11183481-11183637,11184220-11184284,
           11184397-11184469,11184759-11184905,11185515-11185562,
           11185637-11185716,11186112-11186439,11186525-11186576,
           11187397-11187523,11187613-11187990
          Length = 486

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 195 GFQRVPPLSCYPGHAKLSYSAPWSPD 118
           GF+R+P L C+P   +L+    WSP+
Sbjct: 202 GFKRIPSLECWPDVLQLTEPENWSPN 227


>12_01_0173 -
           1292164-1293036,1294063-1294098,1294195-1294334,
           1295592-1295748,1295862-1296035,1296146-1296396,
           1299446-1299590
          Length = 591

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +2

Query: 476 ISSGLPRVAVPPPFIVIT*SKPKSEARRIW-PGLRTSTKKYTSFLETAGAKYGVGFWKP 649
           +S+G PR++VPPP  + T S+ +S+ ++   P     +   T F +  GA    GF+ P
Sbjct: 525 MSAGFPRLSVPPPLPLPTQSQNQSQPQQQQSPQAPQQSPTSTGFFQPPGA----GFFPP 579


>02_04_0114 +
           19879468-19880671,19882007-19882179,19882265-19882605,
           19882698-19882977,19883070-19883267,19883380-19883652
          Length = 822

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +1

Query: 454 TNGNVTIYLFRPSPCSCTATIHCDHLIEAQVGGEKDLARAKDL-NKEVYKFFR 609
           T+G      F+ +    T+ +  +HL E  V GE+ +  A+DL  K+V K+FR
Sbjct: 621 TDGKGRTVDFKNTIIIMTSNLGAEHLTEG-VTGERTMEAARDLVMKQVQKYFR 672


>02_04_0520 - 23628183-23628195,23629354-23630036
          Length = 231

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 21/64 (32%), Positives = 30/64 (46%)
 Frame = +2

Query: 398 GASYLRLRPDRVAMQDATAQMAMLQFISSGLPRVAVPPPFIVIT*SKPKSEARRIWPGLR 577
           G  Y  L+P+ V +QD+   M +   +S+ LP    PPP      + P  +  R   G R
Sbjct: 162 GVVYRDLKPENVLIQDSGHIMLVDFDLSTTLPPPPPPPP----PDTAPPPQTARSRGGRR 217

Query: 578 TSTK 589
            STK
Sbjct: 218 DSTK 221


>09_06_0251 - 21859484-21862162
          Length = 892

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +1

Query: 415 PASRPCGHARRHCTNGNVTIYLFRPSPCSCTATIHCDHLIE 537
           P S    + R    NG +T    RP   SC+  + C ++I+
Sbjct: 579 PTSENLTYVRCRSENGIITFEFTRPLRPSCSGRVECKNIID 619


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,727,037
Number of Sequences: 37544
Number of extensions: 465768
Number of successful extensions: 1322
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1322
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)