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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0483
         (697 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25599-7|AAA28050.2|  777|Caenorhabditis elegans Aconitase prote...   170   7e-43
L25599-8|AAL65788.1|  665|Caenorhabditis elegans Aconitase prote...    99   3e-21
L25599-9|AAN63393.1|  683|Caenorhabditis elegans Aconitase prote...    86   2e-17
Z83224-2|CAE17796.1|  208|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z81125-11|CAE17965.1|  208|Caenorhabditis elegans Hypothetical p...    29   3.2  
Z81125-7|CAJ85774.1|   84|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z81063-4|CAB02955.1|  209|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z50740-2|CAA90608.1|  383|Caenorhabditis elegans Hypothetical pr...    29   4.2  

>L25599-7|AAA28050.2|  777|Caenorhabditis elegans Aconitase protein
           2, isoform a protein.
          Length = 777

 Score =  170 bits (414), Expect = 7e-43
 Identities = 85/133 (63%), Positives = 99/133 (74%)
 Frame = +2

Query: 272 LPYEKLTKNLEVVKKRLGRELTLSEKILYSHLDDPKGQEIERGASYLRLRPDRVAMQDAT 451
           LPYEKL++ +++VK RL R LTLSEKILY HLD PK Q+IERG SYLRLRPDRVAMQDAT
Sbjct: 40  LPYEKLSQTVKIVKDRLKRPLTLSEKILYGHLDQPKTQDIERGVSYLRLRPDRVAMQDAT 99

Query: 452 AQMAMLQFISSGLPRVAVPPPFIVIT*SKPKSEARRIWPGLRTSTKKYTSFLETAGAKYG 631
           AQMAMLQFISSGLP+ AVP         + +    +     +   K+  +FL TAG+KYG
Sbjct: 100 AQMAMLQFISSGLPKTAVPSTIHCDHLIEAQKGGAQDLARAKDLNKEVFNFLATAGSKYG 159

Query: 632 VGFWKPGSGIIHQ 670
           VGFWKPGSGIIHQ
Sbjct: 160 VGFWKPGSGIIHQ 172


>L25599-8|AAL65788.1|  665|Caenorhabditis elegans Aconitase protein
           2, isoform b protein.
          Length = 665

 Score = 98.7 bits (235), Expect = 3e-21
 Identities = 47/64 (73%), Positives = 53/64 (82%)
 Frame = +2

Query: 272 LPYEKLTKNLEVVKKRLGRELTLSEKILYSHLDDPKGQEIERGASYLRLRPDRVAMQDAT 451
           LPYEKL++ +++VK RL R LTLSEKILY HLD PK Q+IERG SYLRLRPDRVAMQDA 
Sbjct: 40  LPYEKLSQTVKIVKDRLKRPLTLSEKILYGHLDQPKTQDIERGVSYLRLRPDRVAMQDAV 99

Query: 452 AQMA 463
             MA
Sbjct: 100 DVMA 103


>L25599-9|AAN63393.1|  683|Caenorhabditis elegans Aconitase protein
           2, isoform c protein.
          Length = 683

 Score = 86.2 bits (204), Expect = 2e-17
 Identities = 44/78 (56%), Positives = 52/78 (66%)
 Frame = +2

Query: 437 MQDATAQMAMLQFISSGLPRVAVPPPFIVIT*SKPKSEARRIWPGLRTSTKKYTSFLETA 616
           MQDATAQMAMLQFISSGLP+ AVP         + +    +     +   K+  +FL TA
Sbjct: 1   MQDATAQMAMLQFISSGLPKTAVPSTIHCDHLIEAQKGGAQDLARAKDLNKEVFNFLATA 60

Query: 617 GAKYGVGFWKPGSGIIHQ 670
           G+KYGVGFWKPGSGIIHQ
Sbjct: 61  GSKYGVGFWKPGSGIIHQ 78



 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = +1

Query: 508 ATIHCDHLIEAQVGGEKDLARAKDLNKEVYKF 603
           +TIHCDHLIEAQ GG +DLARAKDLNKEV+ F
Sbjct: 25  STIHCDHLIEAQKGGAQDLARAKDLNKEVFNF 56


>Z83224-2|CAE17796.1|  208|Caenorhabditis elegans Hypothetical
           protein F29C6.1a protein.
          Length = 208

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
 Frame = +1

Query: 457 NGNVTIYLFRPSPCSCTATIHCDHLIEAQVGG----EKDLARAKDLNKEVYKFFRD 612
           NG   IY+F+        T+H D LIE Q+ G    EKD ++ +D N+EV +  +D
Sbjct: 142 NGIPFIYIFKE-------TVHADGLIEDQIAGMSLKEKDESKVED-NEEVVEEVKD 189


>Z81125-11|CAE17965.1|  208|Caenorhabditis elegans Hypothetical
           protein F29C6.1a protein.
          Length = 208

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
 Frame = +1

Query: 457 NGNVTIYLFRPSPCSCTATIHCDHLIEAQVGG----EKDLARAKDLNKEVYKFFRD 612
           NG   IY+F+        T+H D LIE Q+ G    EKD ++ +D N+EV +  +D
Sbjct: 142 NGIPFIYIFKE-------TVHADGLIEDQIAGMSLKEKDESKVED-NEEVVEEVKD 189


>Z81125-7|CAJ85774.1|   84|Caenorhabditis elegans Hypothetical
           protein F29C6.1b protein.
          Length = 84

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
 Frame = +1

Query: 457 NGNVTIYLFRPSPCSCTATIHCDHLIEAQVGG----EKDLARAKDLNKEVYKFFRD 612
           NG   IY+F+        T+H D LIE Q+ G    EKD ++ +D N+EV +  +D
Sbjct: 18  NGIPFIYIFKE-------TVHADGLIEDQIAGMSLKEKDESKVED-NEEVVEEVKD 65


>Z81063-4|CAB02955.1|  209|Caenorhabditis elegans Hypothetical
           protein F15D3.6 protein.
          Length = 209

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +2

Query: 257 FDKVPLPYEKLTKNLEVVKKRLGRELTLSEKILYSHLDDP 376
           F K P P  +    ++VVK+ L     L+E+I+ SH   P
Sbjct: 22  FRKYPNPLNRSITGIDVVKQTLEAGKILTERIIQSHFSIP 61


>Z50740-2|CAA90608.1|  383|Caenorhabditis elegans Hypothetical
           protein F31B12.3 protein.
          Length = 383

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = +2

Query: 257 FDKVPLPYEKLTKNLEVVKKRLGRELTLSEKILYSHLD 370
           FDKV  P  K  KN+ + K +L   L LS KIL+   D
Sbjct: 128 FDKVVKP--KTGKNIVIYKVKLLTNLNLSNKILFQFQD 163


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,469,729
Number of Sequences: 27780
Number of extensions: 351738
Number of successful extensions: 962
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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