BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0483 (697 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value L25599-7|AAA28050.2| 777|Caenorhabditis elegans Aconitase prote... 170 7e-43 L25599-8|AAL65788.1| 665|Caenorhabditis elegans Aconitase prote... 99 3e-21 L25599-9|AAN63393.1| 683|Caenorhabditis elegans Aconitase prote... 86 2e-17 Z83224-2|CAE17796.1| 208|Caenorhabditis elegans Hypothetical pr... 29 3.2 Z81125-11|CAE17965.1| 208|Caenorhabditis elegans Hypothetical p... 29 3.2 Z81125-7|CAJ85774.1| 84|Caenorhabditis elegans Hypothetical pr... 29 3.2 Z81063-4|CAB02955.1| 209|Caenorhabditis elegans Hypothetical pr... 29 3.2 Z50740-2|CAA90608.1| 383|Caenorhabditis elegans Hypothetical pr... 29 4.2 >L25599-7|AAA28050.2| 777|Caenorhabditis elegans Aconitase protein 2, isoform a protein. Length = 777 Score = 170 bits (414), Expect = 7e-43 Identities = 85/133 (63%), Positives = 99/133 (74%) Frame = +2 Query: 272 LPYEKLTKNLEVVKKRLGRELTLSEKILYSHLDDPKGQEIERGASYLRLRPDRVAMQDAT 451 LPYEKL++ +++VK RL R LTLSEKILY HLD PK Q+IERG SYLRLRPDRVAMQDAT Sbjct: 40 LPYEKLSQTVKIVKDRLKRPLTLSEKILYGHLDQPKTQDIERGVSYLRLRPDRVAMQDAT 99 Query: 452 AQMAMLQFISSGLPRVAVPPPFIVIT*SKPKSEARRIWPGLRTSTKKYTSFLETAGAKYG 631 AQMAMLQFISSGLP+ AVP + + + + K+ +FL TAG+KYG Sbjct: 100 AQMAMLQFISSGLPKTAVPSTIHCDHLIEAQKGGAQDLARAKDLNKEVFNFLATAGSKYG 159 Query: 632 VGFWKPGSGIIHQ 670 VGFWKPGSGIIHQ Sbjct: 160 VGFWKPGSGIIHQ 172 >L25599-8|AAL65788.1| 665|Caenorhabditis elegans Aconitase protein 2, isoform b protein. Length = 665 Score = 98.7 bits (235), Expect = 3e-21 Identities = 47/64 (73%), Positives = 53/64 (82%) Frame = +2 Query: 272 LPYEKLTKNLEVVKKRLGRELTLSEKILYSHLDDPKGQEIERGASYLRLRPDRVAMQDAT 451 LPYEKL++ +++VK RL R LTLSEKILY HLD PK Q+IERG SYLRLRPDRVAMQDA Sbjct: 40 LPYEKLSQTVKIVKDRLKRPLTLSEKILYGHLDQPKTQDIERGVSYLRLRPDRVAMQDAV 99 Query: 452 AQMA 463 MA Sbjct: 100 DVMA 103 >L25599-9|AAN63393.1| 683|Caenorhabditis elegans Aconitase protein 2, isoform c protein. Length = 683 Score = 86.2 bits (204), Expect = 2e-17 Identities = 44/78 (56%), Positives = 52/78 (66%) Frame = +2 Query: 437 MQDATAQMAMLQFISSGLPRVAVPPPFIVIT*SKPKSEARRIWPGLRTSTKKYTSFLETA 616 MQDATAQMAMLQFISSGLP+ AVP + + + + K+ +FL TA Sbjct: 1 MQDATAQMAMLQFISSGLPKTAVPSTIHCDHLIEAQKGGAQDLARAKDLNKEVFNFLATA 60 Query: 617 GAKYGVGFWKPGSGIIHQ 670 G+KYGVGFWKPGSGIIHQ Sbjct: 61 GSKYGVGFWKPGSGIIHQ 78 Score = 60.5 bits (140), Expect = 1e-09 Identities = 26/32 (81%), Positives = 29/32 (90%) Frame = +1 Query: 508 ATIHCDHLIEAQVGGEKDLARAKDLNKEVYKF 603 +TIHCDHLIEAQ GG +DLARAKDLNKEV+ F Sbjct: 25 STIHCDHLIEAQKGGAQDLARAKDLNKEVFNF 56 >Z83224-2|CAE17796.1| 208|Caenorhabditis elegans Hypothetical protein F29C6.1a protein. Length = 208 Score = 29.1 bits (62), Expect = 3.2 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%) Frame = +1 Query: 457 NGNVTIYLFRPSPCSCTATIHCDHLIEAQVGG----EKDLARAKDLNKEVYKFFRD 612 NG IY+F+ T+H D LIE Q+ G EKD ++ +D N+EV + +D Sbjct: 142 NGIPFIYIFKE-------TVHADGLIEDQIAGMSLKEKDESKVED-NEEVVEEVKD 189 >Z81125-11|CAE17965.1| 208|Caenorhabditis elegans Hypothetical protein F29C6.1a protein. Length = 208 Score = 29.1 bits (62), Expect = 3.2 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%) Frame = +1 Query: 457 NGNVTIYLFRPSPCSCTATIHCDHLIEAQVGG----EKDLARAKDLNKEVYKFFRD 612 NG IY+F+ T+H D LIE Q+ G EKD ++ +D N+EV + +D Sbjct: 142 NGIPFIYIFKE-------TVHADGLIEDQIAGMSLKEKDESKVED-NEEVVEEVKD 189 >Z81125-7|CAJ85774.1| 84|Caenorhabditis elegans Hypothetical protein F29C6.1b protein. Length = 84 Score = 29.1 bits (62), Expect = 3.2 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%) Frame = +1 Query: 457 NGNVTIYLFRPSPCSCTATIHCDHLIEAQVGG----EKDLARAKDLNKEVYKFFRD 612 NG IY+F+ T+H D LIE Q+ G EKD ++ +D N+EV + +D Sbjct: 18 NGIPFIYIFKE-------TVHADGLIEDQIAGMSLKEKDESKVED-NEEVVEEVKD 65 >Z81063-4|CAB02955.1| 209|Caenorhabditis elegans Hypothetical protein F15D3.6 protein. Length = 209 Score = 29.1 bits (62), Expect = 3.2 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +2 Query: 257 FDKVPLPYEKLTKNLEVVKKRLGRELTLSEKILYSHLDDP 376 F K P P + ++VVK+ L L+E+I+ SH P Sbjct: 22 FRKYPNPLNRSITGIDVVKQTLEAGKILTERIIQSHFSIP 61 >Z50740-2|CAA90608.1| 383|Caenorhabditis elegans Hypothetical protein F31B12.3 protein. Length = 383 Score = 28.7 bits (61), Expect = 4.2 Identities = 17/38 (44%), Positives = 21/38 (55%) Frame = +2 Query: 257 FDKVPLPYEKLTKNLEVVKKRLGRELTLSEKILYSHLD 370 FDKV P K KN+ + K +L L LS KIL+ D Sbjct: 128 FDKVVKP--KTGKNIVIYKVKLLTNLNLSNKILFQFQD 163 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,469,729 Number of Sequences: 27780 Number of extensions: 351738 Number of successful extensions: 962 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 883 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 959 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1602927856 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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