Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0481
(785 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25798| Best HMM Match : FA_desaturase (HMM E-Value=0) 120 1e-27
SB_42121| Best HMM Match : EGF_CA (HMM E-Value=8.7) 43 2e-04
SB_22355| Best HMM Match : Y_phosphatase (HMM E-Value=0) 31 1.1
SB_52374| Best HMM Match : GATase_2 (HMM E-Value=0) 31 1.4
SB_12261| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_8902| Best HMM Match : DUF1070 (HMM E-Value=0.76) 30 2.4
SB_44412| Best HMM Match : DUF1070 (HMM E-Value=0.76) 30 2.4
SB_52772| Best HMM Match : rve (HMM E-Value=0.001) 29 4.3
SB_13699| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_11417| Best HMM Match : zf-TAZ (HMM E-Value=0.91) 29 5.6
SB_18635| Best HMM Match : 7tm_1 (HMM E-Value=8.54792e-44) 28 9.9
SB_17819| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
>SB_25798| Best HMM Match : FA_desaturase (HMM E-Value=0)
Length = 268
Score = 120 bits (290), Expect = 1e-27
Identities = 47/92 (51%), Positives = 71/92 (77%)
Frame = +2
Query: 509 SETDADPHNATRGFFFSHIGWLLLRKHPEIKAKGHTVDVNDLRNDPILRFQKKYYQILMP 688
SETDADPHNA RGFFFSH+GWL+ RKHP++ KG +D++DL D ++ FQ+++Y+ +
Sbjct: 69 SETDADPHNAKRGFFFSHVGWLMQRKHPDVIRKGKGIDLSDLYADSVVMFQRRHYKKISM 128
Query: 689 LACFIMPTYVPTLWGETVWNSFYVWQFSATYM 784
L C ++PT VP+LWGE++WN+++ F+ Y+
Sbjct: 129 LMCVLIPTLVPSLWGESLWNAYFT-SFALRYV 159
Score = 85.8 bits (203), Expect = 4e-17
Identities = 32/64 (50%), Positives = 48/64 (75%)
Frame = +3
Query: 339 LYLCSGLGITAGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYQRP 518
L LC G G+T GAHRLWAH+++KA+ PLR+++ + N++A Q+ + +W+RDHR+HHKY
Sbjct: 12 LSLCRGYGVTIGAHRLWAHRTFKAKWPLRLVIMLMNSMAAQNDIFEWSRDHRVHHKYSET 71
Query: 519 MRTP 530
P
Sbjct: 72 DADP 75
>SB_42121| Best HMM Match : EGF_CA (HMM E-Value=8.7)
Length = 202
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/39 (38%), Positives = 28/39 (71%)
Frame = +2
Query: 668 YYQILMPLACFIMPTYVPTLWGETVWNSFYVWQFSATYM 784
+Y+ + L C ++PT VP+LWGE++WN+++ F+ Y+
Sbjct: 2 HYKKISMLMCVLIPTLVPSLWGESLWNAYFT-SFALRYV 39
>SB_22355| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 1252
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 629 DLRNDPILRFQKKYYQILMPL--ACFIMPTYVPTLWGETVWNSFYV 760
D+ N PILR+ +Y + P+ ++ P + TL G WN + +
Sbjct: 407 DMPNGPILRYHVTFYDVQTPVQGGTYLAPGTLYTLTGLGPWNEYAI 452
>SB_52374| Best HMM Match : GATase_2 (HMM E-Value=0)
Length = 1075
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 603 ALISGCFLNNNQPMWEKKNPRVALWGSASVSDICG 499
A++ G F N P WE+ +P L + ++ ICG
Sbjct: 548 AIVHGRFSTNTFPSWERAHPNRYLAHNGEINTICG 582
>SB_12261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 430
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 631 IIH-VDGMAFGFDFGMLPQQQPANVGKEESSGCVVG 527
++H V G FG DF PAN G E S C VG
Sbjct: 339 VVHGVRGGVFGEDFAQHLAPNPANTGDEASYDCGVG 374
>SB_8902| Best HMM Match : DUF1070 (HMM E-Value=0.76)
Length = 544
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 631 IIH-VDGMAFGFDFGMLPQQQPANVGKEESSGCVVG 527
++H V G FG DF PAN G E S C VG
Sbjct: 305 VVHGVRGGVFGEDFAQHLAPNPANTGDEASYDCGVG 340
>SB_44412| Best HMM Match : DUF1070 (HMM E-Value=0.76)
Length = 632
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 631 IIH-VDGMAFGFDFGMLPQQQPANVGKEESSGCVVG 527
++H V G FG DF PAN G E S C VG
Sbjct: 541 VVHGVRGGVFGEDFAQHLAPNPANTGDEASYDCGVG 576
>SB_52772| Best HMM Match : rve (HMM E-Value=0.001)
Length = 646
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 569 SQCGKRRILGLRCGGPHRSLIFVVHAMITGPIHYGIL 459
+ CGK +++ R GP R +I +++ IT P I+
Sbjct: 195 TSCGKTQLVVDRLVGPFRGIIIIINYSITKPFRENIV 231
>SB_13699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 28.7 bits (61), Expect = 5.6
Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Frame = -2
Query: 397 LCAQSLCAPAVIPNPEHKYKNM-ANIEVLHMALKRNKYPP*TPPTCRIKTESHFSTQSSK 221
+C LC P P H + N+ LH K P R ++H S + +
Sbjct: 15 VCQHFLC-PVAQHRPSHIHANLNTRKRTLHAHYTHTKRPI---HDTRSTLDAHTSHYTPR 70
Query: 220 VSSLLREVHGAVHLLAGYWRRLRTI 146
S R H + Y RR+RT+
Sbjct: 71 TSHYTRHTSHYTHRTSHYTRRMRTV 95
>SB_11417| Best HMM Match : zf-TAZ (HMM E-Value=0.91)
Length = 390
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -2
Query: 622 VDGMAFGFDFGMLPQQQPANVGKEESSGCVVG 527
V G FG DF PAN G E S C VG
Sbjct: 155 VRGGVFGEDFAQHLAPNPANTGDEASYDCGVG 186
>SB_18635| Best HMM Match : 7tm_1 (HMM E-Value=8.54792e-44)
Length = 350
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 321 SIFAIFLYLCSGLGITAGAHRLWAHKSY 404
++F I + LG+++ H WAHK+Y
Sbjct: 148 AVFVIIVAWALALGVSSLIHVTWAHKAY 175
>SB_17819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 578 TTTSQCGKRRILGLRCGGPHRSLIFVVHAMITGPIHY 468
TT CG R+L + G H + +++ + PIH+
Sbjct: 35 TTPKHCGILRVLSMDTGTIHARVARILNPELANPIHH 71
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,740,601
Number of Sequences: 59808
Number of extensions: 694604
Number of successful extensions: 1812
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1811
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2155861620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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