Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0481
(785 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 115 3e-26
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 115 3e-26
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 115 4e-26
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 115 4e-26
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 105 5e-23
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 105 5e-23
AF038608-6|AAT92088.1| 312|Caenorhabditis elegans Serpentine re... 30 1.6
U80952-2|AAB38094.1| 309|Caenorhabditis elegans Muscle attachme... 29 3.8
U80952-1|AAU20846.1| 315|Caenorhabditis elegans Muscle attachme... 29 3.8
Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical p... 29 5.0
AF026211-8|AAB71291.2| 234|Caenorhabditis elegans Hypothetical ... 29 5.0
Z81081-2|CAB03091.2| 451|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 28 6.6
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 115 bits (277), Expect = 3e-26
Identities = 47/84 (55%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Frame = +2
Query: 509 SETDADPHNATRGFFFSHIGWLLLRKHPEIKAKGHTVDVNDLRNDPILRFQKKYYQILMP 688
++TDADPHN TRGFFF+H+GWLL+RKHP++K +G +D++DL +DP+L FQ+K+Y L+
Sbjct: 141 TDTDADPHNTTRGFFFAHMGWLLVRKHPQVKEQGAKLDMSDLLSDPVLVFQRKHYFPLVI 200
Query: 689 LACFIMPTYVPT-LWGETVWNSFY 757
L CFI+PT +P W ET + +FY
Sbjct: 201 LCCFILPTIIPVYFWKETAFIAFY 224
Score = 113 bits (272), Expect = 1e-25
Identities = 48/83 (57%), Positives = 58/83 (69%)
Frame = +3
Query: 261 LHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSYKARLPLRILLTI 440
LH G Y +F+A W+T IF LY+ G GITAGAHRLW+HKSYKA P+RI L I
Sbjct: 58 LHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWSHKSYKATTPMRIFLMI 117
Query: 441 FNTIAFQDAVVDWARDHRMHHKY 509
N IA Q+ V++WARDHR HHK+
Sbjct: 118 LNNIALQNDVIEWARDHRCHHKW 140
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 115 bits (277), Expect = 3e-26
Identities = 47/84 (55%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Frame = +2
Query: 509 SETDADPHNATRGFFFSHIGWLLLRKHPEIKAKGHTVDVNDLRNDPILRFQKKYYQILMP 688
++TDADPHN TRGFFF+H+GWLL+RKHP++K +G +D++DL +DP+L FQ+K+Y L+
Sbjct: 141 TDTDADPHNTTRGFFFAHMGWLLVRKHPQVKEQGAKLDMSDLLSDPVLVFQRKHYFPLVI 200
Query: 689 LACFIMPTYVPT-LWGETVWNSFY 757
L CFI+PT +P W ET + +FY
Sbjct: 201 LCCFILPTIIPVYFWKETAFIAFY 224
Score = 113 bits (272), Expect = 1e-25
Identities = 48/83 (57%), Positives = 58/83 (69%)
Frame = +3
Query: 261 LHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSYKARLPLRILLTI 440
LH G Y +F+A W+T IF LY+ G GITAGAHRLW+HKSYKA P+RI L I
Sbjct: 58 LHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWSHKSYKATTPMRIFLMI 117
Query: 441 FNTIAFQDAVVDWARDHRMHHKY 509
N IA Q+ V++WARDHR HHK+
Sbjct: 118 LNNIALQNDVIEWARDHRCHHKW 140
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 115 bits (276), Expect = 4e-26
Identities = 48/85 (56%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
Frame = +2
Query: 509 SETDADPHNATRGFFFSHIGWLLLRKHPEIKAKGHTVDVNDLRNDPILRFQKKYYQILMP 688
++TDADPHN TRGFFF+H+GWLL+RKHP++K G +D++DL +DP+L FQ+K+Y L+
Sbjct: 140 TDTDADPHNTTRGFFFTHMGWLLVRKHPQVKEHGGKLDLSDLFSDPVLVFQRKHYFPLVI 199
Query: 689 LACFIMPTYVPT-LWGETVWNSFYV 760
L CFI+PT +P W ET + +FYV
Sbjct: 200 LFCFILPTIIPVYFWKETAFIAFYV 224
Score = 114 bits (275), Expect = 6e-26
Identities = 47/83 (56%), Positives = 61/83 (73%)
Frame = +3
Query: 261 LHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSYKARLPLRILLTI 440
LHV G Y +F A W+T++F+ LY+ SG GITAGAHRLW+HKSYKA P+RI L +
Sbjct: 57 LHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWSHKSYKATTPMRIFLML 116
Query: 441 FNTIAFQDAVVDWARDHRMHHKY 509
N IA Q+ +++WARDHR HHK+
Sbjct: 117 LNNIALQNDIIEWARDHRCHHKW 139
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 115 bits (276), Expect = 4e-26
Identities = 48/85 (56%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
Frame = +2
Query: 509 SETDADPHNATRGFFFSHIGWLLLRKHPEIKAKGHTVDVNDLRNDPILRFQKKYYQILMP 688
++TDADPHN TRGFFF+H+GWLL+RKHP++K G +D++DL +DP+L FQ+K+Y L+
Sbjct: 140 TDTDADPHNTTRGFFFTHMGWLLVRKHPQVKEHGGKLDLSDLFSDPVLVFQRKHYFPLVI 199
Query: 689 LACFIMPTYVPT-LWGETVWNSFYV 760
L CFI+PT +P W ET + +FYV
Sbjct: 200 LFCFILPTIIPVYFWKETAFIAFYV 224
Score = 114 bits (275), Expect = 6e-26
Identities = 47/83 (56%), Positives = 61/83 (73%)
Frame = +3
Query: 261 LHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSYKARLPLRILLTI 440
LHV G Y +F A W+T++F+ LY+ SG GITAGAHRLW+HKSYKA P+RI L +
Sbjct: 57 LHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWSHKSYKATTPMRIFLML 116
Query: 441 FNTIAFQDAVVDWARDHRMHHKY 509
N IA Q+ +++WARDHR HHK+
Sbjct: 117 LNNIALQNDIIEWARDHRCHHKW 139
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 105 bits (251), Expect = 5e-23
Identities = 45/103 (43%), Positives = 71/103 (68%), Gaps = 2/103 (1%)
Frame = +3
Query: 207 SREETLE-DCVEKCDSVFI-LHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAH 380
S+++ ++ + V K ++F+ LH+G + G Y +F+A W T + L+ +G+T GAH
Sbjct: 29 SKKQVIKMEIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAH 88
Query: 381 RLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKY 509
RLWAH++YKA L R+ L + N+IAFQ+ ++DWARDHR HHK+
Sbjct: 89 RLWAHRAYKATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKW 131
Score = 105 bits (251), Expect = 5e-23
Identities = 41/84 (48%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
Frame = +2
Query: 509 SETDADPHNATRGFFFSHIGWLLLRKHPEIKAKGHTVDVNDLRNDPILRFQKKYYQILMP 688
++TDADPH+ RG FF+H+GWLL++KH ++K +G +D++DL DP+L FQ+K Y L+
Sbjct: 132 TDTDADPHSTNRGMFFAHMGWLLVKKHDQLKIQGGKLDLSDLYEDPVLMFQRKNYLPLVG 191
Query: 689 LACFIMPTYVP-TLWGETVWNSFY 757
+ CF +PT++P LWGE+ + +FY
Sbjct: 192 IFCFALPTFIPVVLWGESAFIAFY 215
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 105 bits (251), Expect = 5e-23
Identities = 45/103 (43%), Positives = 71/103 (68%), Gaps = 2/103 (1%)
Frame = +3
Query: 207 SREETLE-DCVEKCDSVFI-LHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAH 380
S+++ ++ + V K ++F+ LH+G + G Y +F+A W T + L+ +G+T GAH
Sbjct: 29 SKKQVIKMEIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAH 88
Query: 381 RLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKY 509
RLWAH++YKA L R+ L + N+IAFQ+ ++DWARDHR HHK+
Sbjct: 89 RLWAHRAYKATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKW 131
Score = 105 bits (251), Expect = 5e-23
Identities = 41/84 (48%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
Frame = +2
Query: 509 SETDADPHNATRGFFFSHIGWLLLRKHPEIKAKGHTVDVNDLRNDPILRFQKKYYQILMP 688
++TDADPH+ RG FF+H+GWLL++KH ++K +G +D++DL DP+L FQ+K Y L+
Sbjct: 132 TDTDADPHSTNRGMFFAHMGWLLVKKHDQLKIQGGKLDLSDLYEDPVLMFQRKNYLPLVG 191
Query: 689 LACFIMPTYVP-TLWGETVWNSFY 757
+ CF +PT++P LWGE+ + +FY
Sbjct: 192 IFCFALPTFIPVVLWGESAFIAFY 215
>AF038608-6|AAT92088.1| 312|Caenorhabditis elegans Serpentine
receptor, class z protein82 protein.
Length = 312
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 6/46 (13%)
Frame = +2
Query: 656 FQKKYYQI--LMPLACF----IMPTYVPTLWGETVWNSFYVWQFSA 775
FQK++++ L L CF IM Y PT+W ++ W +F ++ ++
Sbjct: 142 FQKQFFKYIRLFYLICFGTELIMYFYSPTIWSKSRWTTFELYSVAS 187
>U80952-2|AAB38094.1| 309|Caenorhabditis elegans Muscle attachment
abnormal protein1, isoform a protein.
Length = 309
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 112 MPPQRKQEASWVLYEADANNLPEDAPPHVPPSAEKRP 222
+PP +A + + +P +PPH PPS E P
Sbjct: 66 LPPTPHFQAPFSPHPPPVQQVPSYSPPHAPPSYETYP 102
>U80952-1|AAU20846.1| 315|Caenorhabditis elegans Muscle attachment
abnormal protein1, isoform b protein.
Length = 315
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 112 MPPQRKQEASWVLYEADANNLPEDAPPHVPPSAEKRP 222
+PP +A + + +P +PPH PPS E P
Sbjct: 72 LPPTPHFQAPFSPHPPPVQQVPSYSPPHAPPSYETYP 108
>Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical
protein Y69H2.12 protein.
Length = 528
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 292 CSFSKPCGGLLY-SPYFCTCVRDWVSQLAR-TDFGHTSPIKLGCH 420
C S C +L S Y CTC DW + D T P++ GC+
Sbjct: 171 CQNSGNCTMVLENSNYLCTCSPDWQGRRCEVADAVSTPPVQDGCY 215
>AF026211-8|AAB71291.2| 234|Caenorhabditis elegans Hypothetical
protein T13B5.8 protein.
Length = 234
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -3
Query: 576 NNQPMWEKKNPRVALWGSASVSDICGACDDHGPNPL 469
NN+P+++ ++P A WG + S C + NP+
Sbjct: 166 NNKPIYDARDPLFAKWGERAASAHCKPETEQQINPV 201
>Z81081-2|CAB03091.2| 451|Caenorhabditis elegans Hypothetical
protein F42D1.3 protein.
Length = 451
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 692 ACFIMPTYVPTLWGETVWNSFYVW 763
+C +MPT + T G+TV+ + Y W
Sbjct: 224 SCVMMPTAILTNMGQTVYFNIYFW 247
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -3
Query: 276 HHRHAE*KQNHISPHNLPRSLLC*GRYMGRCIF--WQVIGVGFVQYPRSLLFPLG 118
H++H Q+H PH++P++L+ M RC+ W + V +Y ++ P G
Sbjct: 157 HNQHRNHNQSHSGPHHIPQNLM-----MPRCMLKDWPIRCVVEGKYHAVIIGPNG 206
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -3
Query: 276 HHRHAE*KQNHISPHNLPRSLLC*GRYMGRCIF--WQVIGVGFVQYPRSLLFPLG 118
H++H Q+H PH++P++L+ M RC+ W + V +Y ++ P G
Sbjct: 281 HNQHRNHNQSHSGPHHIPQNLM-----MPRCMLKDWPIRCVVEGKYHAVIIGPNG 330
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,134,544
Number of Sequences: 27780
Number of extensions: 518651
Number of successful extensions: 1678
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1671
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -