Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0477
(765 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI000065E2E3 Cluster: Homolog of Homo sapiens "Histone... 91 4e-17
UniRef50_UPI0000660B5F Cluster: H4 histone family, member L; n=1... 88 2e-16
UniRef50_UPI000066070E Cluster: Homolog of Homo sapiens "H2A his... 88 2e-16
UniRef50_Q4SKJ3 Cluster: Histone H4; n=3; Euteleostomi|Rep: Hist... 88 2e-16
UniRef50_P62805 Cluster: Histone H4; n=364; root|Rep: Histone H4... 88 2e-16
UniRef50_Q01FF9 Cluster: Histone H4; n=1; Ostreococcus tauri|Rep... 87 3e-16
UniRef50_A3BZ47 Cluster: Histone H4; n=2; Eukaryota|Rep: Histone... 87 5e-16
UniRef50_P80739 Cluster: Histone H4; n=143; root|Rep: Histone H4... 83 1e-14
UniRef50_A7SHX4 Cluster: Predicted protein; n=9; Nematostella ve... 82 1e-14
UniRef50_A4QW60 Cluster: Histone H4; n=1; Magnaporthe grisea|Rep... 62 1e-08
UniRef50_A4HNK8 Cluster: Histone h4; n=1; Leishmania braziliensi... 62 1e-08
UniRef50_Q4QFI3 Cluster: Histone h4; n=19; Leishmania|Rep: Histo... 61 3e-08
UniRef50_A2Q2T8 Cluster: Histone H4; Histone-fold; n=1; Medicago... 60 6e-08
UniRef50_A6S8Z2 Cluster: Histone H4; n=1; Botryotinia fuckeliana... 59 1e-07
UniRef50_Q0J1K7 Cluster: Os09g0433500 protein; n=10; Eukaryota|R... 56 1e-06
UniRef50_Q8TA36 Cluster: Histone H4; n=1; Heterodera glycines|Re... 56 1e-06
UniRef50_Q6A1P4 Cluster: Histone H4; n=1; Euplotes vannus|Rep: H... 56 1e-06
UniRef50_Q00YR9 Cluster: Chromosome 11 contig 1, DNA sequence; n... 54 3e-06
UniRef50_A0BJB4 Cluster: Histone H4; n=2; Paramecium tetraurelia... 54 3e-06
UniRef50_Q7RX38 Cluster: Histone H4; n=3; Sordariomycetes|Rep: H... 54 3e-06
UniRef50_A2RAE9 Cluster: Histone H4; n=1; Aspergillus niger|Rep:... 54 5e-06
UniRef50_Q0D5M3 Cluster: Os07g0549900 protein; n=1; Oryza sativa... 51 4e-05
UniRef50_Q0UHL1 Cluster: Histone H4; n=1; Phaeosphaeria nodorum|... 50 8e-05
UniRef50_A4VCP0 Cluster: Putative uncharacterized protein; n=1; ... 48 3e-04
UniRef50_Q4RFZ6 Cluster: Chromosome undetermined SCAF15108, whol... 48 3e-04
UniRef50_A6QZ47 Cluster: Predicted protein; n=1; Ajellomyces cap... 47 6e-04
UniRef50_Q9TXG5 Cluster: Histone D=CORE histone H4 homolog; n=1;... 39 0.12
UniRef50_A4HBJ5 Cluster: Histone H4; n=1; Leishmania braziliensi... 39 0.12
UniRef50_UPI0000E47984 Cluster: PREDICTED: similar to RNA bindin... 39 0.16
UniRef50_A4HHY8 Cluster: Histone h4; n=1; Leishmania braziliensi... 39 0.16
UniRef50_A0CDN4 Cluster: Histone H4; n=2; Paramecium tetraurelia... 38 0.21
UniRef50_Q8SQP4 Cluster: Histone H4; n=1; Encephalitozoon cunicu... 38 0.21
UniRef50_UPI00006CA43B Cluster: Response regulator receiver doma... 37 0.63
UniRef50_Q1DKH6 Cluster: Predicted protein; n=1; Coccidioides im... 36 1.5
UniRef50_A1IB81 Cluster: Membrane carboxypeptidase/penicillin-bi... 34 3.4
UniRef50_A0IMF1 Cluster: Histidine kinase precursor; n=1; Serrat... 34 3.4
UniRef50_Q6CGH9 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 34 4.4
UniRef50_Q5BH63 Cluster: Survival factor 1; n=18; Pezizomycotina... 34 4.4
UniRef50_A0KIX8 Cluster: Penicillin-binding protein 1C; n=2; Aer... 33 5.9
UniRef50_Q5QRW6 Cluster: NADH-ubiquinone oxidoreductase chain 4;... 33 5.9
UniRef50_Q0V9Y3 Cluster: Putative uncharacterized protein MGC145... 33 7.8
UniRef50_Q0UTV2 Cluster: Predicted protein; n=1; Phaeosphaeria n... 33 7.8
>UniRef50_UPI000065E2E3 Cluster: Homolog of Homo sapiens "Histone 1,
H2ai; n=2; Takifugu rubripes|Rep: Homolog of Homo
sapiens "Histone 1, H2ai - Takifugu rubripes
Length = 370
Score = 90.6 bits (215), Expect = 4e-17
Identities = 44/52 (84%), Positives = 46/52 (88%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG*RSFIDDFLFL 411
LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG ++ D F L
Sbjct: 63 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGGFINYTDLFRLL 114
Score = 82.6 bits (195), Expect = 1e-14
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 61
>UniRef50_UPI0000660B5F Cluster: H4 histone family, member L; n=1;
Takifugu rubripes|Rep: H4 histone family, member L -
Takifugu rubripes
Length = 220
Score = 88.2 bits (209), Expect = 2e-16
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 180 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 220
Score = 59.7 bits (138), Expect = 8e-08
Identities = 33/40 (82%), Positives = 33/40 (82%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGIT ARRGGVKRISGLIYEETRGVLKV
Sbjct: 146 VLRDNIQGIT-------ARRGGVKRISGLIYEETRGVLKV 178
>UniRef50_UPI000066070E Cluster: Homolog of Homo sapiens "H2A
histone family, member X (H2AFX), mRNA; n=2; Takifugu
rubripes|Rep: Homolog of Homo sapiens "H2A histone
family, member X (H2AFX), mRNA - Takifugu rubripes
Length = 325
Score = 88.2 bits (209), Expect = 2e-16
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.6 bits (195), Expect = 1e-14
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 61
>UniRef50_Q4SKJ3 Cluster: Histone H4; n=3; Euteleostomi|Rep: Histone
H4 - Tetraodon nigroviridis (Green puffer)
Length = 234
Score = 88.2 bits (209), Expect = 2e-16
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 194 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 234
Score = 82.6 bits (195), Expect = 1e-14
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV
Sbjct: 153 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 192
>UniRef50_P62805 Cluster: Histone H4; n=364; root|Rep: Histone H4 -
Homo sapiens (Human)
Length = 103
Score = 88.2 bits (209), Expect = 2e-16
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.6 bits (195), Expect = 1e-14
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 61
>UniRef50_Q01FF9 Cluster: Histone H4; n=1; Ostreococcus tauri|Rep:
Histone H4 - Ostreococcus tauri
Length = 282
Score = 87.4 bits (207), Expect = 3e-16
Identities = 44/55 (80%), Positives = 47/55 (85%), Gaps = 3/55 (5%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG*R---SFIDDFLFL 411
LENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFG + SF+ FL L
Sbjct: 212 LENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGDAKRFSSFVSSFLTL 266
Score = 82.6 bits (195), Expect = 1e-14
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV
Sbjct: 171 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 210
Score = 66.1 bits (154), Expect = 9e-10
Identities = 31/61 (50%), Positives = 42/61 (68%)
Frame = -3
Query: 253 HFENAAGLFVYKTGDAFHSTSASQTTDSRFRDALDVITQHLPVTFSAPLSKTFASFTATG 74
H E+A+GLFV +T DA +T+ASQ +D R RDAL+V+ + L VT A LS+T +FT
Sbjct: 60 HLEDASGLFVDETRDALDTTTASQASDRRLRDALNVVAKDLAVTLGAALSETLTTFTTAR 119
Query: 73 H 71
H
Sbjct: 120 H 120
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = -1
Query: 381 LTAETVQGATLAFQSVHNIHSGDGLPLGVFGVCDSVADHVFEDTL 247
LTAE V+GA LA + V +IH GD L V GV + D V E+ L
Sbjct: 17 LTAEAVEGAALALERVDDIHGGDRLSASVLGVGHGITDDVLEEHL 61
>UniRef50_A3BZ47 Cluster: Histone H4; n=2; Eukaryota|Rep: Histone H4
- Oryza sativa subsp. japonica (Rice)
Length = 285
Score = 87.0 bits (206), Expect = 5e-16
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 245 LENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 285
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+
Sbjct: 204 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKI 243
>UniRef50_P80739 Cluster: Histone H4; n=143; root|Rep: Histone H4 -
Euplotes crassus
Length = 107
Score = 82.6 bits (195), Expect = 1e-14
Identities = 37/41 (90%), Positives = 41/41 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LE+VIRD+VTYTEHAKRKTVTA+DVVYALKRQG+TLYGFGG
Sbjct: 67 LESVIRDSVTYTEHAKRKTVTALDVVYALKRQGKTLYGFGG 107
Score = 66.9 bits (156), Expect = 5e-10
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +2
Query: 137 LRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 250
LR+ I G+TKPAIRRLARRGGVKRIS L+YEETR VLK
Sbjct: 27 LRETILGVTKPAIRRLARRGGVKRISSLVYEETRAVLK 64
>UniRef50_A7SHX4 Cluster: Predicted protein; n=9; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 222
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
+LRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV
Sbjct: 22 ILRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 61
Score = 75.8 bits (178), Expect = 1e-12
Identities = 36/36 (100%), Positives = 36/36 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTL 363
LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTL
Sbjct: 63 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTL 98
>UniRef50_A4QW60 Cluster: Histone H4; n=1; Magnaporthe grisea|Rep:
Histone H4 - Magnaporthe grisea (Rice blast fungus)
(Pyricularia grisea)
Length = 144
Score = 62.5 bits (145), Expect = 1e-08
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 250
+ RD I GITK IRRLARRGGVKR+SG+IY+ETRG +K
Sbjct: 50 IQRDTISGITKGDIRRLARRGGVKRLSGMIYDETRGAMK 88
Score = 50.4 bits (115), Expect = 5e-05
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGF 372
LE ++RD V Y ++ + KTVT DV++ALKR GR +YGF
Sbjct: 91 LERILRDCVAYCDYRRAKTVTVHDVLHALKRIGRPIYGF 129
>UniRef50_A4HNK8 Cluster: Histone h4; n=1; Leishmania
braziliensis|Rep: Histone h4 - Leishmania braziliensis
Length = 145
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 250
VLRDNI GIT+ +RR+ARRGGVKRISG +YEE R VLK
Sbjct: 65 VLRDNIHGITRGCVRRMARRGGVKRISGDLYEEVRRVLK 103
Score = 50.8 bits (116), Expect = 4e-05
Identities = 20/42 (47%), Positives = 34/42 (80%)
Frame = +1
Query: 247 QSVLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGF 372
++ +E+++R + YTE+A++KTVTA DVV AL+++G LYG+
Sbjct: 103 KAYVEDIVRCSTAYTEYARKKTVTAADVVNALRKRGHILYGY 144
>UniRef50_Q4QFI3 Cluster: Histone h4; n=19; Leishmania|Rep: Histone
h4 - Leishmania major
Length = 100
Score = 61.3 bits (142), Expect = 3e-08
Identities = 28/39 (71%), Positives = 34/39 (87%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 250
VLRDNI+GIT+ ++RR+ARRGGVKRIS +YEE R VLK
Sbjct: 20 VLRDNIRGITRGSVRRMARRGGVKRISSEVYEEVRRVLK 58
Score = 53.6 bits (123), Expect = 5e-06
Identities = 25/63 (39%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = +1
Query: 187 SQRWSETHLRSYIRRDPRRS-QSVLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTL 363
++R + S + + RR ++ +E+++R + YTE+A++KTVTA DVV AL++QG L
Sbjct: 37 ARRGGVKRISSEVYEEVRRVLKAYVEDIVRCSTAYTEYARKKTVTACDVVNALRKQGHIL 96
Query: 364 YGF 372
YG+
Sbjct: 97 YGY 99
>UniRef50_A2Q2T8 Cluster: Histone H4; Histone-fold; n=1; Medicago
truncatula|Rep: Histone H4; Histone-fold - Medicago
truncatula (Barrel medic)
Length = 289
Score = 60.1 bits (139), Expect = 6e-08
Identities = 30/40 (75%), Positives = 33/40 (82%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG 375
L+N I DAVTYTEHA+RKT+TAMDVVY QGRTLY FG
Sbjct: 36 LQNEICDAVTYTEHARRKTLTAMDVVY----QGRTLYSFG 71
>UniRef50_A6S8Z2 Cluster: Histone H4; n=1; Botryotinia fuckeliana
B05.10|Rep: Histone H4 - Botryotinia fuckeliana B05.10
Length = 138
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +1
Query: 187 SQRWSETHLRSYIRRDPRRS-QSVLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTL 363
++R + S I D R + +S L +V++D V EH+KRKTVT DV++AL+RQGR +
Sbjct: 71 ARRGGVKRISSMIYGDVREAIKSRLNDVLKDCVALVEHSKRKTVTVNDVIWALRRQGRPI 130
Query: 364 YGF 372
YGF
Sbjct: 131 YGF 133
Score = 56.8 bits (131), Expect = 6e-07
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 250
VL+DNI GITK IRRLARRGGVKRIS +IY + R +K
Sbjct: 54 VLKDNINGITKGDIRRLARRGGVKRISSMIYGDVREAIK 92
>UniRef50_Q0J1K7 Cluster: Os09g0433500 protein; n=10; Eukaryota|Rep:
Os09g0433500 protein - Oryza sativa subsp. japonica
(Rice)
Length = 781
Score = 56.0 bits (129), Expect = 1e-06
Identities = 26/48 (54%), Positives = 31/48 (64%)
Frame = -1
Query: 381 LTAETVQGATLAFQSVHNIHSGDGLPLGVFGVCDSVADHVFEDTLRTP 238
L AE V+GA LA + V ++H GDGL GV GV D VAD V E+ L P
Sbjct: 327 LAAEAVEGAALALEGVDDVHGGDGLAAGVLGVGDGVADDVLEEDLEHP 374
Score = 41.5 bits (93), Expect = 0.022
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = -3
Query: 247 ENAAGLFVYKTGDAFHSTSASQTTDSRFRDALDVITQHLP 128
E+ AGL V + DA H Q D R RD LDV+ +HLP
Sbjct: 372 EHPAGLLVDEPRDALHPAPPRQPPDRRLRDPLDVVAEHLP 411
>UniRef50_Q8TA36 Cluster: Histone H4; n=1; Heterodera glycines|Rep:
Histone H4 - Heterodera glycines (Soybean cyst nematode
worm)
Length = 170
Score = 55.6 bits (128), Expect = 1e-06
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = +1
Query: 247 QSVLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGF 372
+S LE +IRDA Y +H +RKT+ + DVV+AL+RQG +YGF
Sbjct: 58 RSYLETIIRDAAIYCQHERRKTMKSRDVVHALRRQGNLMYGF 99
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 250
+LRD+ + ITK +I RLARR GV RI+ +Y+E R L+
Sbjct: 20 LLRDSAKKITKASILRLARRAGVARINARVYDEVRAALR 58
>UniRef50_Q6A1P4 Cluster: Histone H4; n=1; Euplotes vannus|Rep:
Histone H4 - Euplotes vannus
Length = 125
Score = 55.6 bits (128), Expect = 1e-06
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGF 372
LE ++ D+ +Y + AKRKT+ +DVVYALKRQGR LYG+
Sbjct: 67 LEKLVEDSYSYADCAKRKTIIPLDVVYALKRQGRNLYGY 105
Score = 42.3 bits (95), Expect = 0.013
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +2
Query: 149 IQGITKPAIRRLARRGGVKRISGLIYEETRGV 244
+ GI+ A++RLARRGG+KRIS +YEE R +
Sbjct: 31 VSGISDGAMKRLARRGGIKRISADVYEELRKI 62
>UniRef50_Q00YR9 Cluster: Chromosome 11 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 11 contig 1, DNA
sequence - Ostreococcus tauri
Length = 180
Score = 54.4 bits (125), Expect = 3e-06
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = +3
Query: 84 VKEAKVLERGALNVTGRCCVITSRASRNRLSVVWLAEVE*NASPVLYTKRPAAFSKC 254
VK +V ER A +VT R T +ASR+R S WLA V +ASPV TKRP A S+C
Sbjct: 23 VKVVRVSERAAPSVTARSFATTFKASRSRRSDAWLAVVVSSASPVSSTKRPEASSRC 79
>UniRef50_A0BJB4 Cluster: Histone H4; n=2; Paramecium
tetraurelia|Rep: Histone H4 - Paramecium tetraurelia
Length = 107
Score = 54.4 bits (125), Expect = 3e-06
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTL 363
L ++++DA+ YTEHA+R TV AMDVVYALK+ GR L
Sbjct: 67 LSSLVKDAIIYTEHAQRNTVQAMDVVYALKKYGRNL 102
Score = 39.5 bits (88), Expect = 0.089
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = +2
Query: 152 QGITKPAIRRLARRGGVKRISGLIYEETRGVL 247
Q IT IRRLARRGGVKRIS Y TR V+
Sbjct: 32 QHITNGDIRRLARRGGVKRISSDSYPTTRDVI 63
>UniRef50_Q7RX38 Cluster: Histone H4; n=3; Sordariomycetes|Rep:
Histone H4 - Neurospora crassa
Length = 155
Score = 54.4 bits (125), Expect = 3e-06
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGF 372
L+ ++RD VTYTEH KTVT DV++AL+R G+ +YGF
Sbjct: 80 LQMILRDCVTYTEHRHAKTVTVTDVIFALRRIGKPIYGF 118
Score = 39.1 bits (87), Expect = 0.12
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2
Query: 158 ITKPAIRRLARRGGVKRISGLIYEETRGVLK 250
I K IR + RRGGVKRIS IY+E R LK
Sbjct: 47 IIKDTIRGITRRGGVKRISAGIYDEIRAALK 77
>UniRef50_A2RAE9 Cluster: Histone H4; n=1; Aspergillus niger|Rep:
Histone H4 - Aspergillus niger
Length = 97
Score = 53.6 bits (123), Expect = 5e-06
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 250
+LR+NI GIT+P+IRRLARRGGV RIS +Y E R +K
Sbjct: 23 LLRNNIDGITRPSIRRLARRGGVIRISADVYPEVRKTVK 61
>UniRef50_Q0D5M3 Cluster: Os07g0549900 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os07g0549900 protein -
Oryza sativa subsp. japonica (Rice)
Length = 253
Score = 50.8 bits (116), Expect = 4e-05
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +3
Query: 234 PAAFSKCPRKRDPRRCHIHRTRQEEDRHRYGCCVRSETPRSHPV 365
P PR+R PRR H+HR R +DRHR+G +R++ P HP+
Sbjct: 185 PRGAQDLPRERHPRRRHLHRARPPQDRHRHGRRLRAQAPGPHPL 228
Score = 42.7 bits (96), Expect = 0.010
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +1
Query: 106 KGGR*TSQEGVA**HPGHHETGYPSFGSQRWSETHLRSYIRRDPRRSQSV 255
+G R EG HPG HE G P G + E HL +++R DPR +Q +
Sbjct: 142 QGRREAPPEGAPRQHPGDHEAGDPEAGEEGRGEAHLGAHLRGDPRGAQDL 191
>UniRef50_Q0UHL1 Cluster: Histone H4; n=1; Phaeosphaeria
nodorum|Rep: Histone H4 - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 238
Score = 49.6 bits (113), Expect = 8e-05
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVL 247
+ RD I G+TK IRRLARRGGVKRI+ IY++ R L
Sbjct: 151 IQRDTIYGVTKGDIRRLARRGGVKRIAATIYDDIRQAL 188
Score = 46.4 bits (105), Expect = 8e-04
Identities = 17/39 (43%), Positives = 28/39 (71%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGF 372
L ++++DA+ E + RKT++ D+++ L RQGR LYGF
Sbjct: 192 LRSILKDAIAVVECSGRKTISVTDIIFVLNRQGRQLYGF 230
>UniRef50_A4VCP0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 193
Score = 48.0 bits (109), Expect = 3e-04
Identities = 19/45 (42%), Positives = 31/45 (68%)
Frame = -1
Query: 378 TAETVQGATLAFQSVHNIHSGDGLPLGVFGVCDSVADHVFEDTLR 244
T ET++ + L+ + V N+HS DG VF V DSV+++VF++ L+
Sbjct: 49 TTETIESSALSLEGVDNVHSSDGFSSSVFSVSDSVSNNVFQERLQ 93
>UniRef50_Q4RFZ6 Cluster: Chromosome undetermined SCAF15108, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF15108,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 149
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/50 (46%), Positives = 29/50 (58%)
Frame = +1
Query: 106 KGGR*TSQEGVA**HPGHHETGYPSFGSQRWSETHLRSYIRRDPRRSQSV 255
KGG +G HPGHH+T +P GS R E HLR +R DPR ++ V
Sbjct: 13 KGGAKRHPQGPPRQHPGHHQTRHPPPGSARRREAHLRPDLRGDPRGAEGV 62
Score = 43.6 bits (98), Expect = 0.005
Identities = 21/44 (47%), Positives = 24/44 (54%)
Frame = +3
Query: 234 PAAFSKCPRKRDPRRCHIHRTRQEEDRHRYGCCVRSETPRSHPV 365
P P +RDPRR H+H RQEED +G VR E HPV
Sbjct: 56 PRGAEGVPGERDPRRRHLHGARQEEDGDGHGRGVRPEEAGPHPV 99
>UniRef50_A6QZ47 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 112
Score = 46.8 bits (106), Expect = 6e-04
Identities = 25/38 (65%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 137 LRDNIQGITKPA-IRRLARRGGVKRISGLIYEETRGVL 247
LRDNI GI KP IRRLARRGGV RI IY+ R V+
Sbjct: 27 LRDNIMGIAKPTTIRRLARRGGVIRIQKDIYDTVRSVV 64
>UniRef50_Q9TXG5 Cluster: Histone D=CORE histone H4 homolog; n=1;
Trypanosoma brucei|Rep: Histone D=CORE histone H4
homolog - Trypanosoma brucei
Length = 67
Score = 39.1 bits (87), Expect = 0.12
Identities = 20/63 (31%), Positives = 36/63 (57%)
Frame = +1
Query: 184 GSQRWSETHLRSYIRRDPRRSQSVLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTL 363
G + S+ R +R ++ + + R Y+ ++KTVTA+DVV AL+++G+ L
Sbjct: 7 GEAKGSQKRQRXVLRNVXGITRGSIRRLARXGXVYS---RKKTVTAVDVVNALRKRGKIL 63
Query: 364 YGF 372
YG+
Sbjct: 64 YGY 66
>UniRef50_A4HBJ5 Cluster: Histone H4; n=1; Leishmania
braziliensis|Rep: Histone H4 - Leishmania braziliensis
Length = 106
Score = 39.1 bits (87), Expect = 0.12
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +2
Query: 182 LARRGGVKRISGLIYEETRGVLK 250
+ARRGGVKRISG +YEE R VLK
Sbjct: 1 MARRGGVKRISGDLYEEVRRVLK 23
>UniRef50_UPI0000E47984 Cluster: PREDICTED: similar to RNA binding
motif, single stranded interacting protein; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
RNA binding motif, single stranded interacting protein -
Strongylocentrotus purpuratus
Length = 329
Score = 38.7 bits (86), Expect = 0.16
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKT 312
LENVIRDAVTY EHAK+KT
Sbjct: 135 LENVIRDAVTYCEHAKQKT 153
Score = 35.1 bits (77), Expect = 1.9
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2
Query: 206 RISGLIYEETRGVLKV 253
RISGLIYEETRGVLKV
Sbjct: 118 RISGLIYEETRGVLKV 133
>UniRef50_A4HHY8 Cluster: Histone h4; n=1; Leishmania
braziliensis|Rep: Histone h4 - Leishmania braziliensis
Length = 131
Score = 38.7 bits (86), Expect = 0.16
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = +2
Query: 173 IRRLARRGGVKRISGLIYEETRGVLK 250
IRR+AR GVKRISG +YEE R VLK
Sbjct: 34 IRRMARCDGVKRISGDLYEEVRRVLK 59
>UniRef50_A0CDN4 Cluster: Histone H4; n=2; Paramecium
tetraurelia|Rep: Histone H4 - Paramecium tetraurelia
Length = 116
Score = 38.3 bits (85), Expect = 0.21
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGF 372
+ N++RD++ Y ++ R T+ A D+ A KR G+T GF
Sbjct: 76 ISNILRDSMIYANYSGRATILADDICRAAKRAGQTAIGF 114
Score = 36.7 bits (81), Expect = 0.63
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +2
Query: 158 ITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
I+ IRRLARRGGVKRIS +YE ++ +K+
Sbjct: 43 ISNGDIRRLARRGGVKRISSDVYELSKLYMKL 74
>UniRef50_Q8SQP4 Cluster: Histone H4; n=1; Encephalitozoon
cuniculi|Rep: Histone H4 - Encephalitozoon cuniculi
Length = 103
Score = 38.3 bits (85), Expect = 0.21
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +1
Query: 244 SQSVLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGF 372
++ + + + A Y HAKRKT+T D++++LKR G G+
Sbjct: 61 AREYIRDTLSIACIYATHAKRKTITCSDILHSLKRMGIKYIGY 103
Score = 36.7 bits (81), Expect = 0.63
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +2
Query: 158 ITKPAIRRLARRGGVKRISGLIYEE 232
I+KPAIRR+ARR GV+R+ G ++E
Sbjct: 32 ISKPAIRRIARRAGVRRVGGGCFKE 56
>UniRef50_UPI00006CA43B Cluster: Response regulator receiver domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Response regulator receiver domain containing
protein - Tetrahymena thermophila SB210
Length = 1882
Score = 36.7 bits (81), Expect = 0.63
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 172 YPSFGSQRWSETHLRSYIRRDPRRSQSVLENVIRDAVTYTEHAKRKTVTAMDVVYA 339
Y + + L +I +D R QS+L +IR+A+ YT+H K + VY+
Sbjct: 994 YKKLSFDFYIDPQLPEFIYQDKHRIQSILMTMIRNAIKYTQHGKITVELKIQAVYS 1049
>UniRef50_Q1DKH6 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 131
Score = 35.5 bits (78), Expect = 1.5
Identities = 27/56 (48%), Positives = 29/56 (51%), Gaps = 20/56 (35%)
Frame = +2
Query: 140 RDNIQGITKPAIR--------------------RLARRGGVKRISGLIYEETRGVL 247
RDNI GIT+PAIR RLARRGGVKRI IY+ R VL
Sbjct: 28 RDNIIGITRPAIRYVRMLAASLSRTSSPFSPFIRLARRGGVKRIQKSIYDTAREVL 83
>UniRef50_A1IB81 Cluster: Membrane
carboxypeptidase/penicillin-binding protein-like; n=1;
Candidatus Desulfococcus oleovorans Hxd3|Rep: Membrane
carboxypeptidase/penicillin-binding protein-like -
Candidatus Desulfococcus oleovorans Hxd3
Length = 225
Score = 34.3 bits (75), Expect = 3.4
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -1
Query: 279 SVADHVFEDTLRTP-RVSSYIRPEMRFTPP-LRAKRRIAGFVMPW 151
++ ++F +TL+TP SSY P FTPP L RR G PW
Sbjct: 180 TILSNIFAETLKTPWAYSSYTGPAFLFTPPSLYPCRRRPGKRWPW 224
>UniRef50_A0IMF1 Cluster: Histidine kinase precursor; n=1; Serratia
proteamaculans 568|Rep: Histidine kinase precursor -
Serratia proteamaculans 568
Length = 397
Score = 34.3 bits (75), Expect = 3.4
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +1
Query: 220 YIRRDPRRSQSVLENVIRDAVTYTEH 297
YI+ DP R+ ++EN++ +A+ YTE+
Sbjct: 145 YIKTDPSRTMQIVENIVTNAIKYTEN 170
>UniRef50_Q6CGH9 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 456
Score = 33.9 bits (74), Expect = 4.4
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 214 RSYIRRDPRRSQSVLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQ 351
+S I S+ + D YT+H KRKTV DV ++RQ
Sbjct: 348 KSVIEELVTSSEMFFDQAADDLAAYTDHCKRKTVEPKDVTQLMRRQ 393
>UniRef50_Q5BH63 Cluster: Survival factor 1; n=18;
Pezizomycotina|Rep: Survival factor 1 - Emericella
nidulans (Aspergillus nidulans)
Length = 546
Score = 33.9 bits (74), Expect = 4.4
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +2
Query: 179 RLARRGGVKRISGLIYEETRGVLK 250
RLARRGGV RI IY+E R VLK
Sbjct: 481 RLARRGGVYRIKNEIYDEIRIVLK 504
>UniRef50_A0KIX8 Cluster: Penicillin-binding protein 1C; n=2;
Aeromonas|Rep: Penicillin-binding protein 1C - Aeromonas
hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB
9240)
Length = 799
Score = 33.5 bits (73), Expect = 5.9
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Frame = +1
Query: 190 QRWSETHLRSYIRRDPRRSQSVL---EN---VIRDAVTYTEHAKRKTVTAMDVVYALKRQ 351
QRW E + SYIRR P ++ + L +N +R V E+ + +D+V A++
Sbjct: 317 QRWLEGRVASYIRRFPEQTSAALLLVDNKTMAVRAYVGSAEYGNLRRHGYLDMVQAIRSP 376
Query: 352 GRTLYGF 372
G TL F
Sbjct: 377 GSTLKPF 383
>UniRef50_Q5QRW6 Cluster: NADH-ubiquinone oxidoreductase chain 4;
n=2; Mesobuthus|Rep: NADH-ubiquinone oxidoreductase
chain 4 - Mesobuthus gibbosus (Mediterranean checkered
scorpion)
Length = 439
Score = 33.5 bits (73), Expect = 5.9
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 528 PSRNMFQELFAVVDVVNQSQVTLVRLIIIKFFVLEY 635
PS N+F E+ ++ ++N + +TL+ L++I F Y
Sbjct: 355 PSMNLFSEICLLIGILNWNYITLIPLMLISFLSASY 390
>UniRef50_Q0V9Y3 Cluster: Putative uncharacterized protein
MGC145722; n=1; Xenopus tropicalis|Rep: Putative
uncharacterized protein MGC145722 - Xenopus tropicalis
(Western clawed frog) (Silurana tropicalis)
Length = 777
Score = 33.1 bits (72), Expect = 7.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 259 ENVIRDAVTYTEHAKRKTVTAMDVVYALKRQG 354
E + D Y HA RKT+T D+ ++RQG
Sbjct: 706 EQLCGDLTAYAMHANRKTITCSDIELLMRRQG 737
>UniRef50_Q0UTV2 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 553
Score = 33.1 bits (72), Expect = 7.8
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -3
Query: 268 SRFRGHFENAAGLFVYKTGDAFHSTSASQTTDSRFRD 158
SRF+ +NAAGLF++ D + + T D +++D
Sbjct: 356 SRFKSILKNAAGLFIFSYPDLDQTPNKDMTADRKYKD 392
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,380,633
Number of Sequences: 1657284
Number of extensions: 12182615
Number of successful extensions: 34401
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 33275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34385
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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