Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0477
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    24   1.2  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    23   3.5  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.7  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   4.7  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 353 PWRFRAYTTSIAVTVFLLACSVYV 282
           PW  RAY T  +++VF++   V +
Sbjct: 197 PWGKRAYVTWYSISVFMVPLVVLI 220


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = -3

Query: 163 RDALDVITQHLPVTFSAPLSKTFASFTATGHLDELLGLCFVLV 35
           R AL V T     T  +  +      +    +D  LG CFV+V
Sbjct: 99  RVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMV 141


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/37 (24%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 543 FQELFA-VVDVVNQSQVTLVRLIIIKFFVLEYKQTNK 650
           F ++F  ++ ++  +   L+ + + +  +LEYK+T K
Sbjct: 276 FHDIFLPLLCILTNTLEILITVTVCELTILEYKRTKK 312


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/37 (24%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 543 FQELFA-VVDVVNQSQVTLVRLIIIKFFVLEYKQTNK 650
           F ++F  ++ ++  +   L+ + + +  +LEYK+T K
Sbjct: 101 FHDIFLPLLCILTNTLEILITVTVCELTILEYKRTKK 137


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,447
Number of Sequences: 336
Number of extensions: 3036
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)