Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0477
(765 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0780 - 20500344-20500655 87 1e-17
09_06_0213 - 21610887-21611198 87 1e-17
09_04_0227 + 15861410-15861721 87 1e-17
07_03_0825 + 21773710-21774021 87 1e-17
05_05_0150 + 22758060-22758371 87 1e-17
05_05_0128 - 22591720-22592031 87 1e-17
04_04_0926 - 29462363-29462674 87 1e-17
03_01_0134 + 1060551-1060862 87 1e-17
02_05_0333 - 28012829-28013140 87 1e-17
01_06_1262 + 35833882-35834193 87 1e-17
05_05_0130 - 22598744-22599043,22599296-22599307 72 6e-13
06_03_1231 + 28580006-28580934,28581810-28582086 31 1.3
01_02_0078 - 10894871-10895841,10897268-10898426 30 1.8
12_02_1260 - 27395754-27397499 29 4.1
05_07_0188 - 28269657-28270034,28270113-28270253,28270334-282705... 28 7.1
03_02_1036 + 13573160-13573243,13573361-13573684,13573880-135741... 28 7.1
01_01_0543 + 3985771-3985866,3985965-3986145,3986668-3986780,398... 28 7.1
03_02_0004 - 4869853-4871106 28 9.4
>10_08_0780 - 20500344-20500655
Length = 103
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.2 bits (194), Expect = 4e-16
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKI 61
>09_06_0213 - 21610887-21611198
Length = 103
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.2 bits (194), Expect = 4e-16
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKI 61
>09_04_0227 + 15861410-15861721
Length = 103
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.2 bits (194), Expect = 4e-16
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKI 61
>07_03_0825 + 21773710-21774021
Length = 103
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.2 bits (194), Expect = 4e-16
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKI 61
>05_05_0150 + 22758060-22758371
Length = 103
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.2 bits (194), Expect = 4e-16
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKI 61
>05_05_0128 - 22591720-22592031
Length = 103
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.2 bits (194), Expect = 4e-16
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKI 61
>04_04_0926 - 29462363-29462674
Length = 103
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.2 bits (194), Expect = 4e-16
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKI 61
>03_01_0134 + 1060551-1060862
Length = 103
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.2 bits (194), Expect = 4e-16
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKI 61
>02_05_0333 - 28012829-28013140
Length = 103
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.2 bits (194), Expect = 4e-16
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKI 61
>01_06_1262 + 35833882-35834193
Length = 103
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.2 bits (194), Expect = 4e-16
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKI 61
>05_05_0130 - 22598744-22599043,22599296-22599307
Length = 103
Score = 71.7 bits (168), Expect = 6e-13
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
L+NVI DA+TYTEHA RKTV AMDVVYALK QGRT+Y FGG
Sbjct: 63 LKNVICDAITYTEHAHRKTVMAMDVVYALKLQGRTIYDFGG 103
Score = 66.9 bits (156), Expect = 2e-11
Identities = 32/43 (74%), Positives = 36/43 (83%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVSSK 262
V R IQGI KP IRRLAR+GGVKRISGLIY+ETRGVL++ K
Sbjct: 22 VFRGYIQGIAKPVIRRLARKGGVKRISGLIYKETRGVLEIFLK 64
>06_03_1231 + 28580006-28580934,28581810-28582086
Length = 401
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/79 (25%), Positives = 33/79 (41%)
Frame = +3
Query: 417 CLENDSISFLVTRTTEQ*LTTDNSGDSKQARSNTRRGPSRNMFQELFAVVDVVNQSQVTL 596
C E D SF+ Q T DS+ + + R FQ+ +VDV++ +
Sbjct: 135 CCEEDCCSFVGNFNELQKHTQQKHPDSRPSEIDPARQVDWENFQQSSDIVDVLSTIHAQV 194
Query: 597 VRLIIIKFFVLEYKQTNKG 653
I++ +V+EY G
Sbjct: 195 PNGIVLGDYVIEYGDDETG 213
>01_02_0078 - 10894871-10895841,10897268-10898426
Length = 709
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 234 PAAFSKCPRKRDPRRCH--IHRTRQEEDRHRYGCCVRSE 344
P+A + PR+R RR H I R R+ + RH G VR +
Sbjct: 560 PSALTAAPRRRQIRRVHVRIRRARRCQARHAVGELVRRQ 598
>12_02_1260 - 27395754-27397499
Length = 581
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 296 TPRGRPSPLWMLCTL*NAKVAPCTVSAVKEVSSTIFYFYFLSR 424
TP R SP W LCT+ + C + S+ I YF +++
Sbjct: 308 TPESRSSP-WRLCTVQQVEEVKCLARIIPVWSAGIVYFIVVTQ 349
>05_07_0188 -
28269657-28270034,28270113-28270253,28270334-28270570,
28270733-28271179,28273978-28274274
Length = 499
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +3
Query: 210 SPVLYTKRPAAFSKCPRKRDPRRCHIHRTRQEEDRHRYGCCVRS 341
SPV PA + P + + CHIH D R C R+
Sbjct: 80 SPVAAAHLPAGSRRRPDEGEDISCHIHSLMSMRDAARVACVSRA 123
>03_02_1036 +
13573160-13573243,13573361-13573684,13573880-13574143,
13574662-13574793,13574919-13575620
Length = 501
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +3
Query: 207 ASPVLYTK--RPAAFSKCPRKRDPRRCHIHRTRQEEDRHRYG 326
AS +++ + RPAA + PR + P R+R+ RH +G
Sbjct: 443 ASDIVFARSSRPAAAQRSPRVKGPMTPTRSRSRRSPGRHSFG 484
>01_01_0543 +
3985771-3985866,3985965-3986145,3986668-3986780,
3986854-3987190,3987602-3987603,3987661-3987743,
3988017-3988116,3988330-3988463,3988711-3988788,
3989333-3989387,3990159-3990239,3990369-3990567,
3990609-3990699,3990770-3990892,3991440-3991528,
3992450-3992539,3992619-3992792,3992911-3993035,
3993246-3993372,3993826-3993998
Length = 816
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = +3
Query: 267 DPRRCHIHRTRQEEDR---HRYGCCVRSETPRS 356
D R H+H+ R E H+ CCV +TPRS
Sbjct: 2 DLLRSHLHKVRIPEPGSRIHKDECCVSFDTPRS 34
>03_02_0004 - 4869853-4871106
Length = 417
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/63 (33%), Positives = 25/63 (39%)
Frame = -3
Query: 268 SRFRGHFENAAGLFVYKTGDAFHSTSASQTTDSRFRDALDVITQHLPVTFSAPLSKTFAS 89
+R + HF GL+V H T AS D L T+ P T SA L T S
Sbjct: 175 NRTKLHFVWNRGLYVQGYSPTIHPTDASDLASHATVDILTTATEASP-TASATLQWTHGS 233
Query: 88 FTA 80
A
Sbjct: 234 LNA 236
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,078,758
Number of Sequences: 37544
Number of extensions: 330233
Number of successful extensions: 991
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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