BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0477
(765 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93388-10|CAB07657.1| 103|Caenorhabditis elegans Hypothetical p... 86 3e-17
Z83245-8|CAB05839.1| 103|Caenorhabditis elegans Hypothetical pr... 86 3e-17
Z83245-4|CAB05837.1| 103|Caenorhabditis elegans Hypothetical pr... 86 3e-17
Z83245-1|CAB05835.4| 103|Caenorhabditis elegans Hypothetical pr... 86 3e-17
Z82271-2|CAB05210.1| 103|Caenorhabditis elegans Hypothetical pr... 86 3e-17
Z81128-5|CAB03396.1| 103|Caenorhabditis elegans Hypothetical pr... 86 3e-17
Z73102-10|CAA97407.1| 103|Caenorhabditis elegans Hypothetical p... 86 3e-17
Z70750-7|CAA94742.1| 103|Caenorhabditis elegans Hypothetical pr... 86 3e-17
Z68336-1|CAA92734.1| 103|Caenorhabditis elegans Hypothetical pr... 86 3e-17
X15634-1|CAA33643.1| 103|Caenorhabditis elegans Histone protein... 86 3e-17
U64845-10|AAC48026.1| 103|Caenorhabditis elegans Histone protei... 86 3e-17
U64843-10|AAF98220.1| 103|Caenorhabditis elegans Histone protei... 86 3e-17
U64843-3|AAF98223.1| 103|Caenorhabditis elegans Histone protein... 86 3e-17
U58750-9|AAB00649.2| 103|Caenorhabditis elegans Histone protein... 86 3e-17
U41625-6|AAA83329.1| 103|Caenorhabditis elegans Histone protein... 86 3e-17
AF047656-2|AAC05101.1| 103|Caenorhabditis elegans Histone prote... 86 3e-17
AC024696-3|AAK84518.1| 103|Caenorhabditis elegans Histone prote... 86 3e-17
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 33 0.17
U39742-4|AAK39196.1| 137|Caenorhabditis elegans Hypothetical pr... 28 6.3
AL110500-12|CAB60432.1| 362|Caenorhabditis elegans Hypothetical... 28 6.3
>Z93388-10|CAB07657.1| 103|Caenorhabditis elegans Hypothetical
protein T10C6.14 protein.
Length = 103
Score = 85.8 bits (203), Expect = 3e-17
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTY EHAKRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 61
>Z83245-8|CAB05839.1| 103|Caenorhabditis elegans Hypothetical
protein ZK131.8 protein.
Length = 103
Score = 85.8 bits (203), Expect = 3e-17
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTY EHAKRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 61
>Z83245-4|CAB05837.1| 103|Caenorhabditis elegans Hypothetical
protein ZK131.4 protein.
Length = 103
Score = 85.8 bits (203), Expect = 3e-17
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTY EHAKRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 61
>Z83245-1|CAB05835.4| 103|Caenorhabditis elegans Hypothetical
protein ZK131.1 protein.
Length = 103
Score = 85.8 bits (203), Expect = 3e-17
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTY EHAKRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 61
>Z82271-2|CAB05210.1| 103|Caenorhabditis elegans Hypothetical
protein F54E12.3 protein.
Length = 103
Score = 85.8 bits (203), Expect = 3e-17
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTY EHAKRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 61
>Z81128-5|CAB03396.1| 103|Caenorhabditis elegans Hypothetical
protein T23D8.5 protein.
Length = 103
Score = 85.8 bits (203), Expect = 3e-17
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTY EHAKRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 61
>Z73102-10|CAA97407.1| 103|Caenorhabditis elegans Hypothetical
protein B0035.9 protein.
Length = 103
Score = 85.8 bits (203), Expect = 3e-17
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTY EHAKRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 61
>Z70750-7|CAA94742.1| 103|Caenorhabditis elegans Hypothetical
protein C50F4.7 protein.
Length = 103
Score = 85.8 bits (203), Expect = 3e-17
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTY EHAKRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 61
>Z68336-1|CAA92734.1| 103|Caenorhabditis elegans Hypothetical
protein F22B3.1 protein.
Length = 103
Score = 85.8 bits (203), Expect = 3e-17
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTY EHAKRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 61
>X15634-1|CAA33643.1| 103|Caenorhabditis elegans Histone protein
protein.
Length = 103
Score = 85.8 bits (203), Expect = 3e-17
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTY EHAKRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 61
>U64845-10|AAC48026.1| 103|Caenorhabditis elegans Histone protein 5
protein.
Length = 103
Score = 85.8 bits (203), Expect = 3e-17
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTY EHAKRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 61
>U64843-10|AAF98220.1| 103|Caenorhabditis elegans Histone protein
18 protein.
Length = 103
Score = 85.8 bits (203), Expect = 3e-17
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTY EHAKRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 61
>U64843-3|AAF98223.1| 103|Caenorhabditis elegans Histone protein 28
protein.
Length = 103
Score = 85.8 bits (203), Expect = 3e-17
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTY EHAKRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 61
>U58750-9|AAB00649.2| 103|Caenorhabditis elegans Histone protein 60
protein.
Length = 103
Score = 85.8 bits (203), Expect = 3e-17
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTY EHAKRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 61
>U41625-6|AAA83329.1| 103|Caenorhabditis elegans Histone protein 38
protein.
Length = 103
Score = 85.8 bits (203), Expect = 3e-17
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTY EHAKRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 61
>AF047656-2|AAC05101.1| 103|Caenorhabditis elegans Histone protein
31 protein.
Length = 103
Score = 85.8 bits (203), Expect = 3e-17
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTY EHAKRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 61
>AC024696-3|AAK84518.1| 103|Caenorhabditis elegans Histone protein
50 protein.
Length = 103
Score = 85.8 bits (203), Expect = 3e-17
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTY EHAKRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 61
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -3
Query: 253 HFENAAGLFVYKTGDAFHSTSASQTTDSRFRDALDVITQ 137
H +++ G V ++ D+ S+S+ +TTD D DVIT+
Sbjct: 2299 HLQDSTGFHVDQSRDSLDSSSSCETTDGWLGDTFDVITE 2337
>U39742-4|AAK39196.1| 137|Caenorhabditis elegans Hypothetical
protein C25F6.6 protein.
Length = 137
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 303 LGVFGVCDSVADHVFEDTLRTPRVSSYIRPEMRFTPPLRAKRRI 172
+GV GV D+ + + R+ S IRP M P R+ ++I
Sbjct: 17 IGVLGVADASSSMYARRRTASERLMSIIRPRMFQNPEFRSSQKI 60
>AL110500-12|CAB60432.1| 362|Caenorhabditis elegans Hypothetical
protein Y87G2A.11 protein.
Length = 362
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 590 HLRLIYNINDSKKFLKHVSRWSTSCVASCL 501
H I+NI + K+ L+ VSR T V SCL
Sbjct: 93 HSITIWNIEEDKRTLETVSRLPTEQVMSCL 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,093,260
Number of Sequences: 27780
Number of extensions: 302277
Number of successful extensions: 862
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -