Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0477
(765 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59970.1 68418.m07521 histone H4 identical to histone H4 from... 87 1e-17
At5g59690.1 68418.m07483 histone H4 identical to histone H4 from... 87 1e-17
At3g53730.1 68416.m05935 histone H4 identical to histone H4 from... 87 1e-17
At3g46320.1 68416.m05015 histone H4 nearly identical to histone ... 87 1e-17
At3g45930.1 68416.m04970 histone H4 identical to histone H4 from... 87 1e-17
At2g28740.1 68415.m03493 histone H4 identical to histone H4 from... 87 1e-17
At1g07820.2 68414.m00848 histone H4 identical to histone H4 from... 87 1e-17
At1g07820.1 68414.m00847 histone H4 identical to histone H4 from... 87 1e-17
At1g07660.1 68414.m00823 histone H4 identical to histone H4 from... 87 1e-17
At1g18880.1 68414.m02350 proton-dependent oligopeptide transport... 30 1.9
At5g62680.1 68418.m07866 proton-dependent oligopeptide transport... 29 4.5
>At5g59970.1 68418.m07521 histone H4 identical to histone H4 from
Lycopersicon esculentum GI:297150, Lolium temulentum
SP|P02308, Acropora formosa GI:455652, Citrus jambhiri
GI:16797797
Length = 103
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKI 61
>At5g59690.1 68418.m07483 histone H4 identical to histone H4 from
Lycopersicon esculentum GI:297150, Lolium temulentum
SP|P02308, Acropora formosa GI:455652, Citrus jambhiri
GI:16797797
Length = 103
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKI 61
>At3g53730.1 68416.m05935 histone H4 identical to histone H4 from
Lycopersicon esculentum GI:297150, Lolium temulentum
SP|P02308, Acropora formosa GI:455652, Citrus jambhiri
GI:16797797
Length = 103
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKI 61
>At3g46320.1 68416.m05015 histone H4 nearly identical to histone H4
[Arabidopsis thaliana] GI:166740
Length = 103
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKI 61
>At3g45930.1 68416.m04970 histone H4 identical to histone H4 from
Lycopersicon esculentum GI:297150, Lolium temulentum
SP|P02308, Acropora formosa GI:455652, Citrus jambhiri
GI:16797797
Length = 103
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKI 61
>At2g28740.1 68415.m03493 histone H4 identical to histone H4 from
Lycopersicon esculentum GI:297150, Lolium temulentum
SP|P02308, Acropora formosa GI:455652, Citrus jambhiri
GI:16797797
Length = 103
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKI 61
>At1g07820.2 68414.m00848 histone H4 identical to histone H4 from
Lycopersicon esculentum GI:297150, Lolium temulentum
SP|P02308, Acropora formosa GI:455652, Citrus jambhiri
GI:16797797
Length = 103
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKI 61
>At1g07820.1 68414.m00847 histone H4 identical to histone H4 from
Lycopersicon esculentum GI:297150, Lolium temulentum
SP|P02308, Acropora formosa GI:455652, Citrus jambhiri
GI:16797797
Length = 103
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKI 61
>At1g07660.1 68414.m00823 histone H4 identical to histone H4 from
Lycopersicon esculentum GI:297150, Lolium temulentum
SP|P02308, Acropora formosa GI:455652, Citrus jambhiri
GI:16797797
Length = 103
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 256 LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 378
LENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 63 LENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 253
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKI 61
>At1g18880.1 68414.m02350 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 587
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/56 (21%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 305 GRPSPLWMLCTL*NAKVAPCTVSAVKE-VSSTIFYFYFLSRERFNFFFSYTDNRAM 469
G P W LC++ + C + + +S+ +FY ++ + + F S +R +
Sbjct: 306 GSPVDAWKLCSMQQVEEVKCVIRVLPVWLSAALFYLAYIQQTTYTIFQSLQSDRRL 361
>At5g62680.1 68418.m07866 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 616
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 299 PRGRPSPLWMLCTL*NAKVAPCTVSAVK-EVSSTIFYFYFLSRERFNFFFSYTDNRAM 469
P G+P+ W LCT+ + C V + +S+I+Y + + F + +R +
Sbjct: 330 PDGKPADPWKLCTMQQVEEVKCIVRVLPIWFASSIYYLTITQQMTYPVFQALQSDRRL 387
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,987,962
Number of Sequences: 28952
Number of extensions: 271842
Number of successful extensions: 726
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1712086600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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