BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0475 (594 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC150273-1|AAI50274.1| 1422|Homo sapiens YEATS domain containing... 36 0.11 AB033023-1|BAA86511.1| 1487|Homo sapiens KIAA1197 protein protein. 36 0.11 BC039102-1|AAH39102.1| 268|Homo sapiens Unknown (protein for IM... 31 3.1 AK125861-1|BAC86325.1| 367|Homo sapiens protein ( Homo sapiens ... 31 4.1 AK123780-1|BAC85690.1| 367|Homo sapiens protein ( Homo sapiens ... 31 4.1 AK074159-1|BAB84985.1| 318|Homo sapiens FLJ00232 protein protein. 31 4.1 M21665-1|AAA36345.1| 524|Homo sapiens protein ( Human beta-myos... 30 5.4 M21664-1|AAA36344.1| 532|Homo sapiens protein ( Human alpha-myo... 30 5.4 BC107146-1|AAI07147.1| 133|Homo sapiens 15E1.2 protein protein. 30 7.1 BC107145-1|AAI07146.1| 136|Homo sapiens hypothetical protein LO... 30 7.1 AL021546-3|CAA16496.1| 136|Homo sapiens protein ( Human DNA seq... 30 7.1 >BC150273-1|AAI50274.1| 1422|Homo sapiens YEATS domain containing 2 protein. Length = 1422 Score = 35.9 bits (79), Expect = 0.11 Identities = 16/54 (29%), Positives = 31/54 (57%) Frame = +2 Query: 41 AQEEKVEKIKSIIRREFQNELEARQSEVVLIDQXXXXXXXXXXXXXYALVSNYY 202 A++ V+KI++II+ +F E++ ++ E+ +IDQ +V+NYY Sbjct: 34 ARDAAVQKIETIIKEQFALEMKNKEHEIEVIDQRLIEARRMMDKLRACIVANYY 87 >AB033023-1|BAA86511.1| 1487|Homo sapiens KIAA1197 protein protein. Length = 1487 Score = 35.9 bits (79), Expect = 0.11 Identities = 16/54 (29%), Positives = 31/54 (57%) Frame = +2 Query: 41 AQEEKVEKIKSIIRREFQNELEARQSEVVLIDQXXXXXXXXXXXXXYALVSNYY 202 A++ V+KI++II+ +F E++ ++ E+ +IDQ +V+NYY Sbjct: 99 ARDAAVQKIETIIKEQFALEMKNKEHEIEVIDQRLIEARRMMDKLRACIVANYY 152 >BC039102-1|AAH39102.1| 268|Homo sapiens Unknown (protein for IMAGE:4829003) protein. Length = 268 Score = 31.1 bits (67), Expect = 3.1 Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%) Frame = +1 Query: 256 IKDPKSKAEISTLLREGQRNIHPSVKK---LLGKKEVDISEIFKSRAPRNKSKKDYSAML 426 IK+ K EIS L ++ QR + + +K L+ KKE++ISE+ + K K++ L Sbjct: 138 IKEEGYKKEISKLYQDMQRKVELNEEKHKELIEKKEMEISELNAKLRSQVKEKQNEIIKL 197 Query: 427 Q 429 Q Sbjct: 198 Q 198 >AK125861-1|BAC86325.1| 367|Homo sapiens protein ( Homo sapiens cDNA FLJ43873 fis, clone TESTI4008429, highly similar to Probable cation-transporting ATPase 2 (EC 3.6.3.-). ). Length = 367 Score = 30.7 bits (66), Expect = 4.1 Identities = 13/20 (65%), Positives = 16/20 (80%), Gaps = 2/20 (10%) Frame = -3 Query: 469 ASSWSLPRWCSYVSA--AWP 416 +SSWSLPR CS+ SA +WP Sbjct: 336 SSSWSLPRSCSWTSAWRSWP 355 >AK123780-1|BAC85690.1| 367|Homo sapiens protein ( Homo sapiens cDNA FLJ41786 fis, clone KIDNE2001361, highly similar to Mus musculus catp mRNA for cation-transporting atpase. ). Length = 367 Score = 30.7 bits (66), Expect = 4.1 Identities = 13/20 (65%), Positives = 16/20 (80%), Gaps = 2/20 (10%) Frame = -3 Query: 469 ASSWSLPRWCSYVSA--AWP 416 +SSWSLPR CS+ SA +WP Sbjct: 336 SSSWSLPRSCSWTSAWRSWP 355 >AK074159-1|BAB84985.1| 318|Homo sapiens FLJ00232 protein protein. Length = 318 Score = 30.7 bits (66), Expect = 4.1 Identities = 13/20 (65%), Positives = 16/20 (80%), Gaps = 2/20 (10%) Frame = -3 Query: 469 ASSWSLPRWCSYVSA--AWP 416 +SSWSLPR CS+ SA +WP Sbjct: 287 SSSWSLPRSCSWTSAWRSWP 306 >M21665-1|AAA36345.1| 524|Homo sapiens protein ( Human beta-myosin heavy chain mRNA, 3' end. ). Length = 524 Score = 30.3 bits (65), Expect = 5.4 Identities = 18/65 (27%), Positives = 35/65 (53%) Frame = +1 Query: 274 KAEISTLLREGQRNIHPSVKKLLGKKEVDISEIFKSRAPRNKSKKDYSAMLQKRNYTISA 453 K E+ + L E + ++ K+L + +++ ++I K+ RN ++KD KRN+ Sbjct: 126 KMELQSALEEAEASLEHEEGKIL-RAQLEFNQI-KAEIERNVAEKDEEMEQAKRNHLRVV 183 Query: 454 DSTKT 468 DS +T Sbjct: 184 DSLQT 188 >M21664-1|AAA36344.1| 532|Homo sapiens protein ( Human alpha-myosin heavy chain mRNA, 3' end. ). Length = 532 Score = 30.3 bits (65), Expect = 5.4 Identities = 18/65 (27%), Positives = 35/65 (53%) Frame = +1 Query: 274 KAEISTLLREGQRNIHPSVKKLLGKKEVDISEIFKSRAPRNKSKKDYSAMLQKRNYTISA 453 K E+ + L E + ++ K+L + +++ ++I K+ RN ++KD KRN+ Sbjct: 133 KMELQSALEEAEASLEHEEGKIL-RAQLEFNQI-KAEIERNVAEKDEEMEQAKRNHQRVV 190 Query: 454 DSTKT 468 DS +T Sbjct: 191 DSLQT 195 >BC107146-1|AAI07147.1| 133|Homo sapiens 15E1.2 protein protein. Length = 133 Score = 29.9 bits (64), Expect = 7.1 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 5/62 (8%) Frame = -1 Query: 474 AERLRGVCRDGV--VTFLQHGRIIFLR---FIPRGSAFEYLRNVHLLLAEQFLDRRVNVT 310 A+RLR V DGV + + R ++LR + A E L+N H ++ E F+ N++ Sbjct: 61 ADRLRAVDTDGVEPMESVLEDRCLYLRSDNVVEGNCADELLQNSHRVVEEYFVAPPGNIS 120 Query: 309 LP 304 LP Sbjct: 121 LP 122 >BC107145-1|AAI07146.1| 136|Homo sapiens hypothetical protein LOC283459 protein. Length = 136 Score = 29.9 bits (64), Expect = 7.1 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 5/62 (8%) Frame = -1 Query: 474 AERLRGVCRDGV--VTFLQHGRIIFLR---FIPRGSAFEYLRNVHLLLAEQFLDRRVNVT 310 A+RLR V DGV + + R ++LR + A E L+N H ++ E F+ N++ Sbjct: 64 ADRLRAVDTDGVEPMESVLEDRCLYLRSDNVVEGNCADELLQNSHRVVEEYFVAPPGNIS 123 Query: 309 LP 304 LP Sbjct: 124 LP 125 >AL021546-3|CAA16496.1| 136|Homo sapiens protein ( Human DNA sequence from clone XX-15E1 on chromosome 12. ). Length = 136 Score = 29.9 bits (64), Expect = 7.1 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 5/62 (8%) Frame = -1 Query: 474 AERLRGVCRDGV--VTFLQHGRIIFLR---FIPRGSAFEYLRNVHLLLAEQFLDRRVNVT 310 A+RLR V DGV + + R ++LR + A E L+N H ++ E F+ N++ Sbjct: 64 ADRLRAVDTDGVEPMESVLEDRCLYLRSDNVVEGNCADELLQNSHRVVEEYFVAPPGNIS 123 Query: 309 LP 304 LP Sbjct: 124 LP 125 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 80,865,252 Number of Sequences: 237096 Number of extensions: 1675928 Number of successful extensions: 4687 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 4518 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4687 length of database: 76,859,062 effective HSP length: 86 effective length of database: 56,468,806 effective search space used: 6268037466 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -