Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0475
         (594 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88314-1|AAF99885.1|  342|Caenorhabditis elegans Hypothetical pr...    32   0.35 
U23484-13|AAC46774.1|  399|Caenorhabditis elegans Hypothetical p...    29   3.3  
AF014939-3|AAB63927.1|  831|Caenorhabditis elegans Hypothetical ...    29   3.3  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    28   4.4  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    28   4.4  
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z70284-20|CAA94286.2|  543|Caenorhabditis elegans Hypothetical p...    27   7.6  
Z70271-8|CAA94238.2|  543|Caenorhabditis elegans Hypothetical pr...    27   7.6  
U70849-11|AAK29800.1|  897|Caenorhabditis elegans Hypothetical p...    27   7.6  
U70849-10|AAK29799.1|  910|Caenorhabditis elegans Hypothetical p...    27   7.6  

>U88314-1|AAF99885.1|  342|Caenorhabditis elegans Hypothetical
           protein C46H11.6 protein.
          Length = 342

 Score = 31.9 bits (69), Expect = 0.35
 Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
 Frame = +1

Query: 262 DPKSK-AEISTLLREGQRNIHPSVKKLLGKKEVDISEIFKSRAPRNKSKKDYSAMLQKRN 438
           DP  K A  +  +     N+H +V K L  K +   ++FK + PR   KK    + ++++
Sbjct: 234 DPDVKMANDAICIGRNASNMHYNVLKKLQPKSILSRDVFKGKNPR--EKKPGKKLSKEKD 291

Query: 439 YTISADSTKTLRPNMEIKTEPAAGRVDQRRSRVL*SRA 552
            TI   ST T   N  I T+ A   +D  ++ V  S A
Sbjct: 292 NTIKI-STATSTAN--ISTDVAEDEIDNLKNVVTKSHA 326


>U23484-13|AAC46774.1|  399|Caenorhabditis elegans Hypothetical
           protein EEED8.14 protein.
          Length = 399

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 23/86 (26%), Positives = 39/86 (45%)
 Frame = +2

Query: 38  VAQEEKVEKIKSIIRREFQNELEARQSEVVLIDQXXXXXXXXXXXXXYALVSNYYNDLKL 217
           + +EE +  +KSI   E   E++ +Q+   L ++              AL +  YN+ K 
Sbjct: 159 IHKEEVLNDVKSI-HGEIM-EMKKKQNVSELFNEEVIKEFKAINREMKALGAKGYNEKKE 216

Query: 218 KLSNAQVEDEIAESKTPSRKPRYQHC 295
           K+    +E+EI  +  PS    Y HC
Sbjct: 217 KM--VLIEEEIVGTWKPSSLHNYPHC 240


>AF014939-3|AAB63927.1|  831|Caenorhabditis elegans Hypothetical
           protein ZC132.4 protein.
          Length = 831

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 22/92 (23%), Positives = 44/92 (47%)
 Frame = +1

Query: 259 KDPKSKAEISTLLREGQRNIHPSVKKLLGKKEVDISEIFKSRAPRNKSKKDYSAMLQKRN 438
           KDP++++ +  L +E Q N+H ++  L   K+   S   K     +K K+ ++       
Sbjct: 568 KDPRARSRLEKLQKERQFNVHQALNTLSANKDGTSS---KMSLISDKMKEAWT------- 617

Query: 439 YTISADSTKTLRPNMEIKTEPAAGRVDQRRSR 534
             I A  T++  PN+ ++ +    + DQ+  R
Sbjct: 618 -QIQAHMTQSPEPNLRLEHQIQILQKDQQEMR 648


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
             protein.
          Length = 18519

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 22/85 (25%), Positives = 38/85 (44%)
 Frame = +1

Query: 268   KSKAEISTLLREGQRNIHPSVKKLLGKKEVDISEIFKSRAPRNKSKKDYSAMLQKRNYTI 447
             K K    +   E Q+N  P VK++   +E  +    KS+A RN+  +   A L  +  TI
Sbjct: 11287 KKKMSQKSESAEAQKNESPEVKEISSFEEKTLKSKKKSKADRNQGTE---ANLGDK--TI 11341

Query: 448   SADSTKTLRPNMEIKTEPAAGRVDQ 522
               D       N  ++   A+G+ ++
Sbjct: 11342 DKDYLSVTDKNQSLEKSEASGQAEK 11366


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
             protein.
          Length = 18534

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 22/85 (25%), Positives = 38/85 (44%)
 Frame = +1

Query: 268   KSKAEISTLLREGQRNIHPSVKKLLGKKEVDISEIFKSRAPRNKSKKDYSAMLQKRNYTI 447
             K K    +   E Q+N  P VK++   +E  +    KS+A RN+  +   A L  +  TI
Sbjct: 11287 KKKMSQKSESAEAQKNESPEVKEISSFEEKTLKSKKKSKADRNQGTE---ANLGDK--TI 11341

Query: 448   SADSTKTLRPNMEIKTEPAAGRVDQ 522
               D       N  ++   A+G+ ++
Sbjct: 11342 DKDYLSVTDKNQSLEKSEASGQAEK 11366


>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
            K10D2.3 protein.
          Length = 1425

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
 Frame = -3

Query: 112  SCLQLILKFAPYY-RFDFFNFL 50
            SC QL++ +  YY RFDF NF+
Sbjct: 1245 SCAQLLIGYFDYYSRFDFRNFV 1266


>Z70284-20|CAA94286.2|  543|Caenorhabditis elegans Hypothetical
           protein W08D2.8 protein.
          Length = 543

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +1

Query: 406 KDYSAMLQKRNYTISADSTKTLRPNMEI---KTEPAAGRVDQR 525
           K+  AMLQ++  T+  D+ K + PN  I   K+E     +D+R
Sbjct: 428 KNRLAMLQQKKKTLELDAQKPMSPNPAIEKKKSEDRRNNMDRR 470


>Z70271-8|CAA94238.2|  543|Caenorhabditis elegans Hypothetical
           protein W08D2.8 protein.
          Length = 543

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +1

Query: 406 KDYSAMLQKRNYTISADSTKTLRPNMEI---KTEPAAGRVDQR 525
           K+  AMLQ++  T+  D+ K + PN  I   K+E     +D+R
Sbjct: 428 KNRLAMLQQKKKTLELDAQKPMSPNPAIEKKKSEDRRNNMDRR 470


>U70849-11|AAK29800.1|  897|Caenorhabditis elegans Hypothetical
           protein F29B9.2b protein.
          Length = 897

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 206 DLKLKLSNAQVEDEIAESKTPSRKPRYQHC 295
           +LKL++ +   ED++ E KTP    R   C
Sbjct: 172 ELKLEVDSDSEEDDVPEQKTPKESDRCGGC 201


>U70849-10|AAK29799.1|  910|Caenorhabditis elegans Hypothetical
           protein F29B9.2a protein.
          Length = 910

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 206 DLKLKLSNAQVEDEIAESKTPSRKPRYQHC 295
           +LKL++ +   ED++ E KTP    R   C
Sbjct: 185 ELKLEVDSDSEEDDVPEQKTPKESDRCGGC 214


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,871,850
Number of Sequences: 27780
Number of extensions: 257790
Number of successful extensions: 806
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)