Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0475
         (594 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               24   1.3  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    21   6.9  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = +1

Query: 346 KKEVDISEIFKSRAPRNKSKKDYSAMLQKRNYTI-SADST---KTLRPNMEIKTEPAAGR 513
           KKE +I E  +S+   ++ +KD   + +K NY   S D       L+PN +++      +
Sbjct: 214 KKEDEIDEGKESKTKLSQWRKDGGTVKKKVNYVYRSVDQVLEDGKLKPNKKVRISNEMSK 273

Query: 514 V 516
           V
Sbjct: 274 V 274


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 164 GDDVTMTSFDRSTPLRFVLP 105
           GDD+    FD+   LR + P
Sbjct: 43  GDDIAWMKFDKEGRLRAINP 62


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,286
Number of Sequences: 438
Number of extensions: 3337
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)