BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0474 (735 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 35 0.077 01_07_0213 - 42028941-42029055,42029444-42029480,42029876-420302... 33 0.18 06_03_1273 + 28892774-28893946,28894964-28895104,28895277-288953... 33 0.24 03_01_0515 - 3864796-3865425 32 0.54 12_02_0995 + 25104303-25104486,25105164-25105275,25106466-251065... 30 2.2 01_06_1349 + 36493358-36493384,36493535-36493663,36493922-364940... 30 2.2 06_03_0809 + 24814590-24816593 29 2.9 03_06_0352 - 33312443-33312652,33312747-33312854,33313224-333133... 29 3.8 01_05_0062 + 17755460-17755522,17756878-17756953,17757074-177571... 29 3.8 01_01_0083 + 631196-631675 29 3.8 06_01_0974 + 7541771-7542553,7542666-7542795,7543098-7543645,754... 29 5.1 03_01_0170 + 1389759-1391159 29 5.1 08_02_0995 - 23401390-23402379 28 6.7 07_03_1584 + 27907345-27907357,27907693-27908039,27908202-279083... 28 6.7 07_03_1304 - 25629822-25629839,25630091-25631148,25631784-256349... 28 6.7 04_04_0677 + 27195264-27195291,27196034-27196271,27196350-271965... 28 6.7 01_06_0747 - 31645136-31646521,31647870-31648142,31649080-316491... 28 6.7 06_01_1169 + 9996068-9996265,9996356-9998589,9998675-9998926,999... 28 8.8 >05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385, 36507-36577,36850-37263,37518-38268 Length = 601 Score = 34.7 bits (76), Expect = 0.077 Identities = 21/68 (30%), Positives = 25/68 (36%) Frame = +3 Query: 522 PGASAGTSIPPFLPSGTGVTSHITGITDGQPRPTLPQPVQTNYPYPQSNTFQTTDKPLPA 701 P + TS PP P T + P P P P N P P Q PLP Sbjct: 51 PADTTPTSPPPASPPLPSATPPLAA----SPPPPPPPPPPRNSPSPPKPPSQAAQSPLPP 106 Query: 702 LVSSQTPP 725 ++ TPP Sbjct: 107 TTTTTTPP 114 >01_07_0213 - 42028941-42029055,42029444-42029480,42029876-42030244, 42030332-42031201,42051574-42052891 Length = 902 Score = 33.5 bits (73), Expect = 0.18 Identities = 25/81 (30%), Positives = 30/81 (37%), Gaps = 6/81 (7%) Frame = +3 Query: 480 HHKCNNLAQLIIMYPGASAGTSIPPFLPSGTGVTSHITGITDG------QPRPTLPQPVQ 641 HH ++ A A+A I P L +G V G QP P LP Sbjct: 537 HHHHHHEAAAAAAAAAAAAADPIFPLLSAGPCVLDPDKSAASGSAIQFWQPPPQLPSSAA 596 Query: 642 TNYPYPQSNTFQTTDKPLPAL 704 P P S+ F KPLP L Sbjct: 597 GGNPNPSSSAFPYLKKPLPML 617 >06_03_1273 + 28892774-28893946,28894964-28895104,28895277-28895329, 28895852-28895966 Length = 493 Score = 33.1 bits (72), Expect = 0.24 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = +3 Query: 531 SAGTSIPPFLPSGTGVTSHITGITDGQPRPTLPQPVQT-NYPYPQSNTFQ 677 S+ +PPF G G +H+ T P P P P+++ + P P S+ F+ Sbjct: 108 SSSDLLPPFPVLGNGSAAHLLRDTPPPPTPRCPAPIKSCSSPAPVSSVFR 157 >03_01_0515 - 3864796-3865425 Length = 209 Score = 31.9 bits (69), Expect = 0.54 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 1/77 (1%) Frame = +3 Query: 498 LAQLIIMYPGASAGTSIPPFLPSGTGVTSHITGITDGQPRPTLPQP-VQTNYPYPQSNTF 674 LA ++ A T+ P PS S + T+ P P P P V ++ P P + Sbjct: 11 LATFVVAIANADDYTTAAP-APSPEAEASPPSPPTEASPPPLAPPPSVTSSPPPPAAGPL 69 Query: 675 QTTDKPLPALVSSQTPP 725 P P++ SS PP Sbjct: 70 MPPPPPPPSVTSSPPPP 86 >12_02_0995 + 25104303-25104486,25105164-25105275,25106466-25106554, 25106635-25106703,25106784-25106913,25107073-25107231, 25107364-25107736,25108070-25108182,25108429-25108624, 25108855-25109288,25109360-25109495,25109668-25111086 Length = 1137 Score = 29.9 bits (64), Expect = 2.2 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = +2 Query: 119 QSPSITTSEAIKSASPQPRYILAQSRTVSRPITIDFLPGRRQPA 250 Q P+++ SEA K S Q+ TVSRP++ +P +Q A Sbjct: 771 QVPTVSKSEAQKQTSLVSSGTATQAITVSRPLSAPQVPAAKQTA 814 >01_06_1349 + 36493358-36493384,36493535-36493663,36493922-36494062, 36495005-36495144,36496292-36496412,36496418-36496924 Length = 354 Score = 29.9 bits (64), Expect = 2.2 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 5/32 (15%) Frame = -1 Query: 255 STAGCRLPGRK-----SIVIGLDTVRDCAKMY 175 ++ G RLPGRK I+ G+ TV+DC+ Y Sbjct: 199 TSTGSRLPGRKRLLWSPIIFGVTTVKDCSVQY 230 >06_03_0809 + 24814590-24816593 Length = 667 Score = 29.5 bits (63), Expect = 2.9 Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 6/83 (7%) Frame = +2 Query: 23 KFIFILPLLYHAVNAAEQQSGLHYYGTSYVRDQSPSITTSEAIKSASPQP----RYILAQ 190 +F+ ++ LL + AA+QQ + G Y D S+ +ASP P Y+ + Sbjct: 6 RFLLLVVLLAVPMTAAQQQYEANAQGDCYT-DNGSSVLGYTCGTAASPPPPPCTAYLTFR 64 Query: 191 SR--TVSRPITIDFLPGRRQPAV 253 S + + PIT+ +L PAV Sbjct: 65 SAPPSYASPITVSYLLNASVPAV 87 >03_06_0352 - 33312443-33312652,33312747-33312854,33313224-33313397, 33313489-33313695,33313700-33313987,33314087-33314319, 33314450-33315263 Length = 677 Score = 29.1 bits (62), Expect = 3.8 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +3 Query: 525 GASAGTSIPPFLPSGTGVTSHITGITDGQPRPTLPQ 632 G G + LP G GV SH+T + +PRP P+ Sbjct: 156 GGGNGGGVTVELPCGMGVGSHVTVV--ARPRPARPE 189 >01_05_0062 + 17755460-17755522,17756878-17756953,17757074-17757145, 17757274-17757361,17757793-17758033,17759461-17759576, 17759804-17760021,17760210-17760241,17760338-17760440, 17760531-17760805 Length = 427 Score = 29.1 bits (62), Expect = 3.8 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = +2 Query: 53 HAVNAAEQQSGLHYYGTSYVRDQSPSITTSEAIKS 157 H V + G++ Y YVRDQ P+ TT + S Sbjct: 250 HMVKGSIDYVGINQYTAYYVRDQQPNATTLPSYSS 284 >01_01_0083 + 631196-631675 Length = 159 Score = 29.1 bits (62), Expect = 3.8 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = +3 Query: 627 PQPVQTNYPYPQSNTFQTTDKPLPALVSSQTPPLS 731 P PV T+ P P S P P+ SS TPP S Sbjct: 37 PTPVTTDCPPPPSTPSSGYSYPPPSSSSSNTPPSS 71 >06_01_0974 + 7541771-7542553,7542666-7542795,7543098-7543645, 7544482-7544864,7546670-7546766 Length = 646 Score = 28.7 bits (61), Expect = 5.1 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +2 Query: 545 NTTISSKWNRSDIAHYRNNRWSTKTHTSAARS 640 NT ++ + R + A Y++ RW H AAR+ Sbjct: 597 NTVVAQEARRQNSAQYKSRRWCHGDHPRAART 628 >03_01_0170 + 1389759-1391159 Length = 466 Score = 28.7 bits (61), Expect = 5.1 Identities = 17/48 (35%), Positives = 24/48 (50%) Frame = +2 Query: 98 GTSYVRDQSPSITTSEAIKSASPQPRYILAQSRTVSRPITIDFLPGRR 241 G + R +SP+ T A SA+PQP + A +R S + D RR Sbjct: 51 GCASTRLRSPAPTLPSAASSAAPQPTPLHAAARVFSCRASYDLAVRRR 98 >08_02_0995 - 23401390-23402379 Length = 329 Score = 28.3 bits (60), Expect = 6.7 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Frame = -1 Query: 339 RIWXXXXXXXXXXXSPGINSICWCCPGYSTAGCRLPGRKSIVIG-LDTVRDCAKMY 175 R W P IN + ++ GCR R + +G LDT+RD A+MY Sbjct: 219 RSWGFMCAGRYGIDHPFINPLSTPAEEWAALGCR---RALVTVGELDTMRDRARMY 271 >07_03_1584 + 27907345-27907357,27907693-27908039,27908202-27908319, 27908653-27908705,27908808-27908978,27909447-27909643, 27909729-27909807,27909954-27909992,27910202-27910321, 27910417-27910518,27910654-27910737,27910832-27911074, 27911156-27911281,27911365-27911439,27911534-27911605, 27911807-27911926,27912075-27912172,27912643-27912802, 27912867-27912980,27913029-27913121,27913122-27913319, 27913404-27913497,27914032-27914192 Length = 958 Score = 28.3 bits (60), Expect = 6.7 Identities = 8/15 (53%), Positives = 9/15 (60%) Frame = -2 Query: 593 CNVRCHSCSTWKKWW 549 C CH CST + WW Sbjct: 810 CAPSCHDCSTLRAWW 824 >07_03_1304 - 25629822-25629839,25630091-25631148,25631784-25634928, 25635454-25636293 Length = 1686 Score = 28.3 bits (60), Expect = 6.7 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = -2 Query: 101 FHSNVSRSVVPLHLLRGTRVA 39 F S +R +V +HLLRGT +A Sbjct: 1195 FRSTTTRKIVDVHLLRGTPIA 1215 >04_04_0677 + 27195264-27195291,27196034-27196271,27196350-27196500, 27196578-27196972,27197270-27197339,27197414-27197696, 27197972-27198297,27198409-27199368 Length = 816 Score = 28.3 bits (60), Expect = 6.7 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +2 Query: 59 VNAAEQQSGLHYYGTSYVRDQSPSIT 136 VN+A+ Q+ L YY + VRD+ S+T Sbjct: 491 VNSADAQALLEYYDDNLVRDKEGSVT 516 >01_06_0747 - 31645136-31646521,31647870-31648142,31649080-31649148, 31649486-31649614 Length = 618 Score = 28.3 bits (60), Expect = 6.7 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Frame = +3 Query: 543 SIPPFLPSGTGVTSHITGITDGQPRPTLPQPVQTNYPYPQ-SNTFQTTDKPL--PALVSS 713 S PP+ +S QP+PT QP PQ SNT Q +P+ P L ++ Sbjct: 319 SFPPYQQQWPQQSSQPAPAPVAQPQPTFSQPFPPPVQQPQLSNTQQFPPQPMQQPQLSNT 378 Query: 714 Q 716 Q Sbjct: 379 Q 379 >06_01_1169 + 9996068-9996265,9996356-9998589,9998675-9998926, 9999007-9999117,9999207-9999288,9999563-9999754 Length = 1022 Score = 27.9 bits (59), Expect = 8.8 Identities = 19/48 (39%), Positives = 22/48 (45%) Frame = +3 Query: 522 PGASAGTSIPPFLPSGTGVTSHITGITDGQPRPTLPQPVQTNYPYPQS 665 P S P LP+ V + T T Q P P PVQT+ P PQS Sbjct: 595 PTPPPSPSQQPPLPTPQPVQASPTSPTK-QHAPPAPPPVQTSPPTPQS 641 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,533,421 Number of Sequences: 37544 Number of extensions: 457139 Number of successful extensions: 1422 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 1349 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1420 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1933531792 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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