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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0474
         (735 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365...    35   0.077
01_07_0213 - 42028941-42029055,42029444-42029480,42029876-420302...    33   0.18 
06_03_1273 + 28892774-28893946,28894964-28895104,28895277-288953...    33   0.24 
03_01_0515 - 3864796-3865425                                           32   0.54 
12_02_0995 + 25104303-25104486,25105164-25105275,25106466-251065...    30   2.2  
01_06_1349 + 36493358-36493384,36493535-36493663,36493922-364940...    30   2.2  
06_03_0809 + 24814590-24816593                                         29   2.9  
03_06_0352 - 33312443-33312652,33312747-33312854,33313224-333133...    29   3.8  
01_05_0062 + 17755460-17755522,17756878-17756953,17757074-177571...    29   3.8  
01_01_0083 + 631196-631675                                             29   3.8  
06_01_0974 + 7541771-7542553,7542666-7542795,7543098-7543645,754...    29   5.1  
03_01_0170 + 1389759-1391159                                           29   5.1  
08_02_0995 - 23401390-23402379                                         28   6.7  
07_03_1584 + 27907345-27907357,27907693-27908039,27908202-279083...    28   6.7  
07_03_1304 - 25629822-25629839,25630091-25631148,25631784-256349...    28   6.7  
04_04_0677 + 27195264-27195291,27196034-27196271,27196350-271965...    28   6.7  
01_06_0747 - 31645136-31646521,31647870-31648142,31649080-316491...    28   6.7  
06_01_1169 + 9996068-9996265,9996356-9998589,9998675-9998926,999...    28   8.8  

>05_01_0004 -
           34967-35149,35340-35501,36078-36225,36309-36385,
           36507-36577,36850-37263,37518-38268
          Length = 601

 Score = 34.7 bits (76), Expect = 0.077
 Identities = 21/68 (30%), Positives = 25/68 (36%)
 Frame = +3

Query: 522 PGASAGTSIPPFLPSGTGVTSHITGITDGQPRPTLPQPVQTNYPYPQSNTFQTTDKPLPA 701
           P  +  TS PP  P     T  +       P P  P P   N P P     Q    PLP 
Sbjct: 51  PADTTPTSPPPASPPLPSATPPLAA----SPPPPPPPPPPRNSPSPPKPPSQAAQSPLPP 106

Query: 702 LVSSQTPP 725
             ++ TPP
Sbjct: 107 TTTTTTPP 114


>01_07_0213 -
           42028941-42029055,42029444-42029480,42029876-42030244,
           42030332-42031201,42051574-42052891
          Length = 902

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 25/81 (30%), Positives = 30/81 (37%), Gaps = 6/81 (7%)
 Frame = +3

Query: 480 HHKCNNLAQLIIMYPGASAGTSIPPFLPSGTGVTSHITGITDG------QPRPTLPQPVQ 641
           HH  ++ A        A+A   I P L +G  V         G      QP P LP    
Sbjct: 537 HHHHHHEAAAAAAAAAAAAADPIFPLLSAGPCVLDPDKSAASGSAIQFWQPPPQLPSSAA 596

Query: 642 TNYPYPQSNTFQTTDKPLPAL 704
              P P S+ F    KPLP L
Sbjct: 597 GGNPNPSSSAFPYLKKPLPML 617


>06_03_1273 +
           28892774-28893946,28894964-28895104,28895277-28895329,
           28895852-28895966
          Length = 493

 Score = 33.1 bits (72), Expect = 0.24
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 531 SAGTSIPPFLPSGTGVTSHITGITDGQPRPTLPQPVQT-NYPYPQSNTFQ 677
           S+   +PPF   G G  +H+   T   P P  P P+++ + P P S+ F+
Sbjct: 108 SSSDLLPPFPVLGNGSAAHLLRDTPPPPTPRCPAPIKSCSSPAPVSSVFR 157


>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
 Frame = +3

Query: 498 LAQLIIMYPGASAGTSIPPFLPSGTGVTSHITGITDGQPRPTLPQP-VQTNYPYPQSNTF 674
           LA  ++    A   T+  P  PS     S  +  T+  P P  P P V ++ P P +   
Sbjct: 11  LATFVVAIANADDYTTAAP-APSPEAEASPPSPPTEASPPPLAPPPSVTSSPPPPAAGPL 69

Query: 675 QTTDKPLPALVSSQTPP 725
                P P++ SS  PP
Sbjct: 70  MPPPPPPPSVTSSPPPP 86


>12_02_0995 +
           25104303-25104486,25105164-25105275,25106466-25106554,
           25106635-25106703,25106784-25106913,25107073-25107231,
           25107364-25107736,25108070-25108182,25108429-25108624,
           25108855-25109288,25109360-25109495,25109668-25111086
          Length = 1137

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +2

Query: 119 QSPSITTSEAIKSASPQPRYILAQSRTVSRPITIDFLPGRRQPA 250
           Q P+++ SEA K  S        Q+ TVSRP++   +P  +Q A
Sbjct: 771 QVPTVSKSEAQKQTSLVSSGTATQAITVSRPLSAPQVPAAKQTA 814


>01_06_1349 +
           36493358-36493384,36493535-36493663,36493922-36494062,
           36495005-36495144,36496292-36496412,36496418-36496924
          Length = 354

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 5/32 (15%)
 Frame = -1

Query: 255 STAGCRLPGRK-----SIVIGLDTVRDCAKMY 175
           ++ G RLPGRK      I+ G+ TV+DC+  Y
Sbjct: 199 TSTGSRLPGRKRLLWSPIIFGVTTVKDCSVQY 230


>06_03_0809 + 24814590-24816593
          Length = 667

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
 Frame = +2

Query: 23  KFIFILPLLYHAVNAAEQQSGLHYYGTSYVRDQSPSITTSEAIKSASPQP----RYILAQ 190
           +F+ ++ LL   + AA+QQ   +  G  Y  D   S+       +ASP P     Y+  +
Sbjct: 6   RFLLLVVLLAVPMTAAQQQYEANAQGDCYT-DNGSSVLGYTCGTAASPPPPPCTAYLTFR 64

Query: 191 SR--TVSRPITIDFLPGRRQPAV 253
           S   + + PIT+ +L     PAV
Sbjct: 65  SAPPSYASPITVSYLLNASVPAV 87


>03_06_0352 -
           33312443-33312652,33312747-33312854,33313224-33313397,
           33313489-33313695,33313700-33313987,33314087-33314319,
           33314450-33315263
          Length = 677

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 525 GASAGTSIPPFLPSGTGVTSHITGITDGQPRPTLPQ 632
           G   G  +   LP G GV SH+T +   +PRP  P+
Sbjct: 156 GGGNGGGVTVELPCGMGVGSHVTVV--ARPRPARPE 189


>01_05_0062 +
           17755460-17755522,17756878-17756953,17757074-17757145,
           17757274-17757361,17757793-17758033,17759461-17759576,
           17759804-17760021,17760210-17760241,17760338-17760440,
           17760531-17760805
          Length = 427

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 53  HAVNAAEQQSGLHYYGTSYVRDQSPSITTSEAIKS 157
           H V  +    G++ Y   YVRDQ P+ TT  +  S
Sbjct: 250 HMVKGSIDYVGINQYTAYYVRDQQPNATTLPSYSS 284


>01_01_0083 + 631196-631675
          Length = 159

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +3

Query: 627 PQPVQTNYPYPQSNTFQTTDKPLPALVSSQTPPLS 731
           P PV T+ P P S        P P+  SS TPP S
Sbjct: 37  PTPVTTDCPPPPSTPSSGYSYPPPSSSSSNTPPSS 71


>06_01_0974 +
           7541771-7542553,7542666-7542795,7543098-7543645,
           7544482-7544864,7546670-7546766
          Length = 646

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 545 NTTISSKWNRSDIAHYRNNRWSTKTHTSAARS 640
           NT ++ +  R + A Y++ RW    H  AAR+
Sbjct: 597 NTVVAQEARRQNSAQYKSRRWCHGDHPRAART 628


>03_01_0170 + 1389759-1391159
          Length = 466

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +2

Query: 98  GTSYVRDQSPSITTSEAIKSASPQPRYILAQSRTVSRPITIDFLPGRR 241
           G +  R +SP+ T   A  SA+PQP  + A +R  S   + D    RR
Sbjct: 51  GCASTRLRSPAPTLPSAASSAAPQPTPLHAAARVFSCRASYDLAVRRR 98


>08_02_0995 - 23401390-23402379
          Length = 329

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = -1

Query: 339 RIWXXXXXXXXXXXSPGINSICWCCPGYSTAGCRLPGRKSIVIG-LDTVRDCAKMY 175
           R W            P IN +      ++  GCR   R  + +G LDT+RD A+MY
Sbjct: 219 RSWGFMCAGRYGIDHPFINPLSTPAEEWAALGCR---RALVTVGELDTMRDRARMY 271


>07_03_1584 +
           27907345-27907357,27907693-27908039,27908202-27908319,
           27908653-27908705,27908808-27908978,27909447-27909643,
           27909729-27909807,27909954-27909992,27910202-27910321,
           27910417-27910518,27910654-27910737,27910832-27911074,
           27911156-27911281,27911365-27911439,27911534-27911605,
           27911807-27911926,27912075-27912172,27912643-27912802,
           27912867-27912980,27913029-27913121,27913122-27913319,
           27913404-27913497,27914032-27914192
          Length = 958

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 593 CNVRCHSCSTWKKWW 549
           C   CH CST + WW
Sbjct: 810 CAPSCHDCSTLRAWW 824


>07_03_1304 - 25629822-25629839,25630091-25631148,25631784-25634928,
            25635454-25636293
          Length = 1686

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -2

Query: 101  FHSNVSRSVVPLHLLRGTRVA 39
            F S  +R +V +HLLRGT +A
Sbjct: 1195 FRSTTTRKIVDVHLLRGTPIA 1215


>04_04_0677 +
           27195264-27195291,27196034-27196271,27196350-27196500,
           27196578-27196972,27197270-27197339,27197414-27197696,
           27197972-27198297,27198409-27199368
          Length = 816

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 59  VNAAEQQSGLHYYGTSYVRDQSPSIT 136
           VN+A+ Q+ L YY  + VRD+  S+T
Sbjct: 491 VNSADAQALLEYYDDNLVRDKEGSVT 516


>01_06_0747 -
           31645136-31646521,31647870-31648142,31649080-31649148,
           31649486-31649614
          Length = 618

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = +3

Query: 543 SIPPFLPSGTGVTSHITGITDGQPRPTLPQPVQTNYPYPQ-SNTFQTTDKPL--PALVSS 713
           S PP+       +S        QP+PT  QP       PQ SNT Q   +P+  P L ++
Sbjct: 319 SFPPYQQQWPQQSSQPAPAPVAQPQPTFSQPFPPPVQQPQLSNTQQFPPQPMQQPQLSNT 378

Query: 714 Q 716
           Q
Sbjct: 379 Q 379


>06_01_1169 +
           9996068-9996265,9996356-9998589,9998675-9998926,
           9999007-9999117,9999207-9999288,9999563-9999754
          Length = 1022

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 19/48 (39%), Positives = 22/48 (45%)
 Frame = +3

Query: 522 PGASAGTSIPPFLPSGTGVTSHITGITDGQPRPTLPQPVQTNYPYPQS 665
           P      S  P LP+   V +  T  T  Q  P  P PVQT+ P PQS
Sbjct: 595 PTPPPSPSQQPPLPTPQPVQASPTSPTK-QHAPPAPPPVQTSPPTPQS 641


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,533,421
Number of Sequences: 37544
Number of extensions: 457139
Number of successful extensions: 1422
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1420
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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