Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0474
         (735 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    25   0.98 
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                23   2.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.0  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              23   3.9  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   5.2  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              22   6.9  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 224 FLPGRRQPAVEYPGQHQQ 277
           ++P  R   VE+P QHQQ
Sbjct: 9   YIPDLRNGGVEHPHQHQQ 26


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/41 (24%), Positives = 16/41 (39%)
 Frame = +2

Query: 503 PINHNVPGSISGNFNTTISSKWNRSDIAHYRNNRWSTKTHT 625
           PI+ N+     G + T     W+++       N   TK  T
Sbjct: 272 PIDDNIDDEFKGTYKTLYKQMWSQNITERPTTNEVITKIDT 312


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 341 NHHGQLQVTQILHHH 385
           NHH  LQ T +  HH
Sbjct: 146 NHHHHLQSTAVQDHH 160


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = -2

Query: 497 IVAFMMCVCVGVVVKYGLCVDCHGRYELIGSE 402
           +V F  C+CV  +    L +  H   E+  +E
Sbjct: 5   VVIFAFCICVNAMTIEELKIQLHDVQEICKTE 36


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = -2

Query: 680 CLKCI*LRVRIVSLNGLRKCGSWLTICYSCNVRCHSCSTWK 558
           CLK    + R  SL+ ++   +     Y  N++C  CST++
Sbjct: 117 CLKFEEQKRRKKSLDDVKILRNDRIDSYKSNLKCDKCSTYQ 157


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 497 IVAFMMCVCVGVV 459
           ++ F +CVCVG +
Sbjct: 5   VIIFAICVCVGAM 17


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,928
Number of Sequences: 438
Number of extensions: 5065
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)