Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0473
         (766 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RIF1 Cluster: Phosphatase; n=5; Plasmodium (Vinckeia)...    37   0.48 
UniRef50_Q9QJ59 Cluster: B4; n=1; Human herpesvirus 6B|Rep: B4 -...    35   2.5  
UniRef50_UPI00015A4B10 Cluster: UPI00015A4B10 related cluster; n...    34   4.4  
UniRef50_Q8IM40 Cluster: Putative uncharacterized protein; n=4; ...    33   5.9  
UniRef50_Q7RBQ6 Cluster: Putative uncharacterized protein PY0608...    33   5.9  
UniRef50_O51526 Cluster: DNA polymerase III subunit alpha; n=7; ...    33   7.8  

>UniRef50_Q7RIF1 Cluster: Phosphatase; n=5; Plasmodium
           (Vinckeia)|Rep: Phosphatase - Plasmodium yoelii yoelii
          Length = 1427

 Score = 37.1 bits (82), Expect = 0.48
 Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
 Frame = -1

Query: 178 VNKKKKK--EFIANVNL-LFTSV*KHIITVVERFLQILIRFFSH 56
           +N+KKKK  E I N+N+ L +SV  HI++ V  FLQI+  F++H
Sbjct: 760 INRKKKKINEIIRNINMNLASSV--HILSFVSNFLQIVQAFYNH 801


>UniRef50_Q9QJ59 Cluster: B4; n=1; Human herpesvirus 6B|Rep: B4 -
           Human herpesvirus 6B
          Length = 193

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +3

Query: 258 ICFFFLEYFFLCTRECQRFINRFKSLLFVCFFRYCQNANNMVRNKLLLCA 407
           +C FF  YFF+C   C  F   F  + FVC + +   A   VR +  +CA
Sbjct: 31  LCVFFCVYFFVCVFFCVCF---FVCVFFVCVYAFAHVAVCSVRPRRHVCA 77


>UniRef50_UPI00015A4B10 Cluster: UPI00015A4B10 related cluster; n=3;
           Danio rerio|Rep: UPI00015A4B10 UniRef100 entry - Danio
           rerio
          Length = 1282

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 10/137 (7%)
 Frame = +3

Query: 60  LKNRIKICRNLSTTVIMCFYTDVNNRLTFAMNSFFFFLFTMYQGAINIMSFEY*NVS**F 239
           LK  IK C     ++I  F   V+  L F+  SFFFF F +     NI+SF         
Sbjct: 292 LKKTIKYCHYFCFSIISFFI--VSFFLFFSFFSFFFFFFFLKSFFSNILSFFL------L 343

Query: 240 L*STSNICFFFLEYFFLCTRECQRF--------INRFKSLLF--VCFFRYCQNANNMVRN 389
               S   FFFL+ FF+  +    F        +N+   + F  +CF+    N ++ ++ 
Sbjct: 344 FFLCSFFLFFFLKSFFVNNKFFVLFLSSSFVKSVNKLWLIFFLSLCFWGQIFNKHDTLKK 403

Query: 390 KLLLCAFNDIDNFIFIY 440
           + +   F  + N +  Y
Sbjct: 404 QFVTLFFKYVKNKLLKY 420


>UniRef50_Q8IM40 Cluster: Putative uncharacterized protein; n=4;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 1515

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = -1

Query: 184 YIVNKKKKK--EFIANVNLLFTSV*KHIITVVERFLQILIRFFSH 56
           + + KKKKK  E I N+N+  +S   HI++ V  FLQI+   ++H
Sbjct: 868 FSIYKKKKKINEIIHNINIQLSSS-VHILSFVSNFLQIIQALYNH 911


>UniRef50_Q7RBQ6 Cluster: Putative uncharacterized protein PY06083;
            n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY06083 - Plasmodium yoelii yoelii
          Length = 1402

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
 Frame = +1

Query: 217  IKMSVNNFSDQHQIFVSFFLNIFFYAHENAKDL*IDLSLYCLFVFFVIVK------MLII 378
            IK+S+ N S    +F S F+N++FY  ++  DL I+  LY + +F+ + K         +
Sbjct: 954  IKISLKNIS----LFSSSFINLYFY-DKDFIDLIINEVLYLIDIFYNLKKTEKINNKFNL 1008

Query: 379  WLETNCYCARLM-ILTTLFLYTQPNLNIRTFFEL 477
              E NCY    + I   L +Y Q N  I    E+
Sbjct: 1009 IKEENCYVRHFVDIYKFLIIYLQINNFINNILEI 1042


>UniRef50_O51526 Cluster: DNA polymerase III subunit alpha; n=7;
            Spirochaetaceae|Rep: DNA polymerase III subunit alpha -
            Borrelia burgdorferi (Lyme disease spirochete)
          Length = 1147

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = +1

Query: 211  SNIKMSVNNFSDQHQIFVSFFLNIFFYAHENAKDL*IDLSLYCLFV 348
            +++K S++NF D      S F N++FY  EN KDL + ++    FV
Sbjct: 1086 NSLKESISNFEDN-----SGFSNVYFYLRENGKDLKLKMNSILNFV 1126


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,190,662
Number of Sequences: 1657284
Number of extensions: 13209456
Number of successful extensions: 28428
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28408
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)